RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 EN2P19622 333 aaPredicted RBP11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 SSTR4P31391 388 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 HNF1BP35680 557 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 PNLIPRP1P54315 467 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 APOFQ13790 326 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 RTP2Q5QGT7 225 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 RETREG3Q86VR2 466 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 THOC6Q86W42 341 aaKnown RBP11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 OR4N4Q8N0Y3 316 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 LSMEM1Q8N8F7 131 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 ANKRD53Q8N9V6 530 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 KREMEN2Q8NCW0 462 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 SHKBP1Q8TBC3 707 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 SCAMP4Q969E2 229 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 ELMOD3Q96FG2 381 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 CMTM7Q96FZ5 175 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 UBXN10Q96LJ8 280 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 FYTTD1Q96QD9 318 aaKnown RBP11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 C12orf57Q99622 126 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 EFCAB11Q9BUY7 163 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 BHLHE41Q9C0J9 482 aaPredicted RBP11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 POLR2J3Q9H1A7 115 aaKnown RBP11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 IFT22Q9H7X7 185 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 TM9SF3Q9HD45 589 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 FAM120CQ9NX05 1096 aaKnown RBP11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 EXTL2Q9UBQ6 330 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 B4GALT6Q9UBX8 382 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 TBX21Q9UL17 535 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 KDELR2P33947 212 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 SF1Q15637 639 aaKnown RBP11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 TATDN3Q17R31 274 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 ARSIQ5FYB1 569 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 DGLUCYQ7Z3D6 616 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 PKP4Q99569 1192 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 KCNN2Q9H2S1 579 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 ZNF334Q9HCZ1 680 aaPredicted RBP11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 PCDHGA8Q9Y5G5 932 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 INPPL1O15357 1258 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 CHST10O43529 356 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 ACADMP11310 421 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 ZNF26P17031 533 aaPredicted RBP11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 HTR1BP28222 390 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 MTAPQ13126 283 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 SEMA3BQ13214 749 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 TUBB3Q13509 450 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 RCAN2Q14206 197 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 SELPLGQ14242 412 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 KRBOX4Q5JUW0 171 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 FAM209AQ5JX71 171 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 C10orf62Q5T681 223 aaPredicted RBP11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 ENPP6Q6UWR7 440 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 INO80EQ8NBZ0 244 aaPredicted RBP11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 OR4K1Q8NGD4 311 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 KLHL6Q8WZ60 621 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 C1QTNF7Q9BXJ2 289 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 SCPEP1Q9HB40 452 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 C3orf14Q9HBI5 128 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 CLDND1Q9NY35 253 aa11.63□□□□□ -0.55
TSPAN9-201ENST00000011898 TRAV20A0A0B4J274 112 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 A0A0G2JN53 185 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 CPSF4LA6NMK7 179 aaKnown RBP11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 OR1F1O43749 312 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 ADH1CP00326 375 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 PAHP00439 452 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 PRH1P02810 166 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 SPARCP09486 303 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 ZNF10P21506 573 aaPredicted RBP11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 CAPZA1P52907 286 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 CDK6Q00534 326 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 TARDBPQ13148 414 aaKnown RBP eCLIP11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 LRIT3Q3SXY7 679 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 ZNF730Q6ZMV8 503 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 ARRDC2Q8TBH0 407 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 ADAMTS15Q8TE58 950 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 ATOH8Q96SQ7 321 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 BOCQ9BWV1 1114 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 MCCC2Q9HCC0 563 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 NUMBLQ9Y6R0 609 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 ZNF780BQ9Y6R6 833 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 SLC35F4A4IF30 521 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 OR6C74A6NCV1 312 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 FARS2O95363 451 aaKnown RBP11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 SERPINA3P01011 423 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 PDYNP01213 254 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 GABARAPL2P60520 117 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 GFOD2Q3B7J2 385 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 FAM46CQ5VWP2 391 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 PSRC1Q6PGN9 363 aaPredicted RBP11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 WDSUB1Q8N9V3 476 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 OR13F1Q8NGS4 319 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 OR51B5Q9H339 312 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 GMPR2Q9P2T1 348 aaKnown RBP11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 TRPS1Q9UHF7 1281 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 RPL36Q9Y3U8 105 aaKnown RBP11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 OARD1Q9Y530 152 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 LOC285095A0A1B0GVY8 99 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 WNT9AO14904 365 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 KIAA0355O15063 1070 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 SCAMP1O15126 338 aa11.62□□□□□ -0.55
TSPAN9-201ENST00000011898 KLK1P06870 262 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms