RNA–Protein interactions for RNA: ENST00000006275.8

TRAPPC6A-201, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6A, Length 805 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-201ENST00000006275 ROPN1BQ9BZX4 212 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC6A-201ENST00000006275 ROPN1Q9HAT0 212 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC6A-201ENST00000006275 PRDM9Q9NQV7 894 aa17.67■□□□□ 0.42
TRAPPC6A-201ENST00000006275 RAB21Q9UL25 225 aa17.67■□□□□ 0.42
TRAPPC6A-201ENST00000006275 GRID1Q9ULK0 1009 aa17.67■□□□□ 0.42
TRAPPC6A-201ENST00000006275 DAPP1Q9UN19 280 aa17.67■□□□□ 0.42
TRAPPC6A-201ENST00000006275 MRPS33Q9Y291 106 aaKnown RBP17.67■□□□□ 0.42
TRAPPC6A-201ENST00000006275 PCDHGB6Q9Y5F9 930 aa17.67■□□□□ 0.42
TRAPPC6A-201ENST00000006275 ACANP16112 2415 aa17.67■□□□□ 0.42
TRAPPC6A-201ENST00000006275 COPEO14579 308 aa17.66■□□□□ 0.42
TRAPPC6A-201ENST00000006275 CD99P14209 185 aa17.66■□□□□ 0.42
TRAPPC6A-201ENST00000006275 HOXB4P17483 251 aaPredicted RBP17.66■□□□□ 0.42
TRAPPC6A-201ENST00000006275 KRT4P19013 534 aa17.66■□□□□ 0.42
TRAPPC6A-201ENST00000006275 IMPDH1P20839 514 aa17.66■□□□□ 0.42
TRAPPC6A-201ENST00000006275 ATP5A1P25705 553 aaKnown RBP17.66■□□□□ 0.42
TRAPPC6A-201ENST00000006275 PTX3P26022 381 aaPredicted RBP17.66■□□□□ 0.42
TRAPPC6A-201ENST00000006275 SSR2P43308 183 aa17.66■□□□□ 0.42
TRAPPC6A-201ENST00000006275 NEK2P51955 445 aa17.66■□□□□ 0.42
TRAPPC6A-201ENST00000006275 LIM2P55344 173 aa17.66■□□□□ 0.42
TRAPPC6A-201ENST00000006275 CLCQ05315 142 aa17.66■□□□□ 0.42
TRAPPC6A-201ENST00000006275 RCN2Q14257 317 aa17.66■□□□□ 0.42
TRAPPC6A-201ENST00000006275 BTBD16Q32M84 506 aa17.66■□□□□ 0.42
TRAPPC6A-201ENST00000006275 CCDC153Q494R4 210 aa17.66■□□□□ 0.42
TRAPPC6A-201ENST00000006275 GGTA1PQ4G0N0 100 aa17.66■□□□□ 0.42
TRAPPC6A-201ENST00000006275 UNC50Q53HI1 259 aa17.66■□□□□ 0.42
TRAPPC6A-201ENST00000006275 PAPD4Q6PIY7 484 aaKnown RBP17.66■□□□□ 0.42
TRAPPC6A-201ENST00000006275 C3P1Q6ZMU1 363 aa17.66■□□□□ 0.42
TRAPPC6A-201ENST00000006275 ZNF793Q6ZN11 406 aa17.66■□□□□ 0.42
TRAPPC6A-201ENST00000006275 C4orf33Q8N1A6 199 aa17.66■□□□□ 0.42
TRAPPC6A-201ENST00000006275 FAM47BQ8NA70 645 aa17.66■□□□□ 0.42
TRAPPC6A-201ENST00000006275 ARMC2Q8NEN0 867 aa17.66■□□□□ 0.42
TRAPPC6A-201ENST00000006275 TRPC4APQ8TEL6 797 aa17.66■□□□□ 0.42
TRAPPC6A-201ENST00000006275 RGMAQ96B86 450 aa17.66■□□□□ 0.42
TRAPPC6A-201ENST00000006275 TMEM237Q96Q45 408 aa17.66■□□□□ 0.42
TRAPPC6A-201ENST00000006275 LPAR4Q99677 370 aa17.66■□□□□ 0.42
TRAPPC6A-201ENST00000006275 TREX2Q9BQ50 279 aaPredicted RBP17.66■□□□□ 0.42
TRAPPC6A-201ENST00000006275 EMCNQ9ULC0 261 aa17.66■□□□□ 0.42
TRAPPC6A-201ENST00000006275 PPT2Q9UMR5 302 aa17.66■□□□□ 0.42
TRAPPC6A-201ENST00000006275 MMACHCQ9Y4U1 282 aa17.66■□□□□ 0.42
TRAPPC6A-201ENST00000006275 FOXE1O00358 373 aaPredicted RBP17.65■□□□□ 0.42
TRAPPC6A-201ENST00000006275 PPP6CO00743 305 aa17.65■□□□□ 0.42
TRAPPC6A-201ENST00000006275 CLDN4O14493 209 aa17.65■□□□□ 0.42
TRAPPC6A-201ENST00000006275 PROCP04070 461 aa17.65■□□□□ 0.42
TRAPPC6A-201ENST00000006275 TUBBP07437 444 aa17.65■□□□□ 0.42
TRAPPC6A-201ENST00000006275 MYL2P10916 166 aa17.65■□□□□ 0.42
TRAPPC6A-201ENST00000006275 MAOAP21397 527 aa17.65■□□□□ 0.42
TRAPPC6A-201ENST00000006275 HIST1H1TP22492 207 aaPredicted RBP17.65■□□□□ 0.42
TRAPPC6A-201ENST00000006275 CRHR1P34998 444 aa17.65■□□□□ 0.42
TRAPPC6A-201ENST00000006275 PRKAA2P54646 552 aa17.65■□□□□ 0.42
TRAPPC6A-201ENST00000006275 IFT88Q13099 833 aa17.65■□□□□ 0.42
TRAPPC6A-201ENST00000006275 ACER2Q5QJU3 275 aa17.65■□□□□ 0.42
TRAPPC6A-201ENST00000006275 FRG2Q64ET8 278 aa17.65■□□□□ 0.42
TRAPPC6A-201ENST00000006275 FCRLBQ6BAA4 426 aa17.65■□□□□ 0.42
TRAPPC6A-201ENST00000006275 OR4C11Q6IEV9 310 aa17.65■□□□□ 0.42
TRAPPC6A-201ENST00000006275 MMP21Q8N119 569 aa17.65■□□□□ 0.42
TRAPPC6A-201ENST00000006275 EID3Q8N140 333 aa17.65■□□□□ 0.42
TRAPPC6A-201ENST00000006275 MREGQ8N565 214 aa17.65■□□□□ 0.42
TRAPPC6A-201ENST00000006275 ACOT4Q8N9L9 421 aa17.65■□□□□ 0.42
TRAPPC6A-201ENST00000006275 CCDC126Q96EE4 140 aa17.65■□□□□ 0.42
TRAPPC6A-201ENST00000006275 ZNF354BQ96LW1 612 aa17.65■□□□□ 0.42
TRAPPC6A-201ENST00000006275 SIGLEC12Q96PQ1 595 aa17.65■□□□□ 0.42
TRAPPC6A-201ENST00000006275 FRG2BQ96QU4 278 aa17.65■□□□□ 0.42
TRAPPC6A-201ENST00000006275 HES7Q9BYE0 225 aa17.65■□□□□ 0.42
TRAPPC6A-201ENST00000006275 LYRM4Q9HD34 91 aa17.65■□□□□ 0.42
TRAPPC6A-201ENST00000006275 NECTIN3Q9NQS3 549 aa17.65■□□□□ 0.42
TRAPPC6A-201ENST00000006275 PRTFDC1Q9NRG1 225 aa17.65■□□□□ 0.42
TRAPPC6A-201ENST00000006275 PSD3Q9NYI0 1048 aa17.65■□□□□ 0.42
TRAPPC6A-201ENST00000006275 COQ3Q9NZJ6 369 aa17.65■□□□□ 0.42
TRAPPC6A-201ENST00000006275 ABCA4P78363 2273 aa17.65■□□□□ 0.42
TRAPPC6A-201ENST00000006275 E9PLN8 166 aa17.64■□□□□ 0.41
TRAPPC6A-201ENST00000006275 ZNHIT1O43257 154 aa17.64■□□□□ 0.41
TRAPPC6A-201ENST00000006275 ASNA1O43681 348 aa17.64■□□□□ 0.41
TRAPPC6A-201ENST00000006275 PLIN3O60664 434 aa17.64■□□□□ 0.41
TRAPPC6A-201ENST00000006275 OR4F21O95013 312 aa17.64■□□□□ 0.41
TRAPPC6A-201ENST00000006275 SCELO95171 688 aa17.64■□□□□ 0.41
TRAPPC6A-201ENST00000006275 DEKP35659 375 aaKnown RBP17.64■□□□□ 0.41
TRAPPC6A-201ENST00000006275 SLC18A2Q05940 514 aa17.64■□□□□ 0.41
TRAPPC6A-201ENST00000006275 TUBA3CQ13748 450 aa17.64■□□□□ 0.41
TRAPPC6A-201ENST00000006275 OR1C1Q15619 314 aa17.64■□□□□ 0.41
TRAPPC6A-201ENST00000006275 EXT1Q16394 746 aa17.64■□□□□ 0.41
TRAPPC6A-201ENST00000006275 C10orf62Q5T681 223 aaPredicted RBP17.64■□□□□ 0.41
TRAPPC6A-201ENST00000006275 PLAG1Q6DJT9 500 aa17.64■□□□□ 0.41
TRAPPC6A-201ENST00000006275 LETMD1Q6P1Q0 360 aa17.64■□□□□ 0.41
TRAPPC6A-201ENST00000006275 TUBA3EQ6PEY2 450 aa17.64■□□□□ 0.41
TRAPPC6A-201ENST00000006275 ZYG11AQ6WRX3 759 aa17.64■□□□□ 0.41
TRAPPC6A-201ENST00000006275 ZNF595Q8IYB9 648 aa17.64■□□□□ 0.41
TRAPPC6A-201ENST00000006275 GHDCQ8N2G8 530 aa17.64■□□□□ 0.41
TRAPPC6A-201ENST00000006275 CCDC63Q8NA47 563 aa17.64■□□□□ 0.41
TRAPPC6A-201ENST00000006275 MDS2Q8NDY4 140 aa17.64■□□□□ 0.41
TRAPPC6A-201ENST00000006275 FRMD6Q96NE9 622 aa17.64■□□□□ 0.41
TRAPPC6A-201ENST00000006275 CSF3RQ99062 836 aa17.64■□□□□ 0.41
TRAPPC6A-201ENST00000006275 MAPKAP1Q9BPZ7 522 aa17.64■□□□□ 0.41
TRAPPC6A-201ENST00000006275 VKORC1Q9BQB6 163 aa17.64■□□□□ 0.41
TRAPPC6A-201ENST00000006275 UTP23Q9BRU9 249 aaKnown RBP17.64■□□□□ 0.41
TRAPPC6A-201ENST00000006275 SORBS1Q9BX66 1292 aaKnown RBP17.64■□□□□ 0.41
TRAPPC6A-201ENST00000006275 ELOVL6Q9H5J4 265 aa17.64■□□□□ 0.41
TRAPPC6A-201ENST00000006275 ANKRD10Q9NXR5 420 aa17.64■□□□□ 0.41
TRAPPC6A-201ENST00000006275 LGALS13Q9UHV8 139 aa17.64■□□□□ 0.41
TRAPPC6A-201ENST00000006275 SPACA6W5XKT8 324 aa17.64■□□□□ 0.41
TRAPPC6A-201ENST00000006275 GTF3C1Q12789 2109 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms