RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 RPRD1BQ9NQG5 326 aaKnown RBP10.03□□□□□ -0.8
CX3CL1-201ENST00000006053 MAT2BQ9NZL9 334 aa10.03□□□□□ -0.8
CX3CL1-201ENST00000006053 SEC14L4Q9UDX3 406 aa10.03□□□□□ -0.8
CX3CL1-201ENST00000006053 SNX7Q9UNH6 387 aa10.03□□□□□ -0.8
CX3CL1-201ENST00000006053 SNX11Q9Y5W9 270 aa10.03□□□□□ -0.8
CX3CL1-201ENST00000006053 FABP12A6NFH5 140 aa10.02□□□□□ -0.8
CX3CL1-201ENST00000006053 APOL3O95236 402 aa10.02□□□□□ -0.8
CX3CL1-201ENST00000006053 CATP04040 527 aaKnown RBP10.02□□□□□ -0.8
CX3CL1-201ENST00000006053 CKMP06732 381 aa10.02□□□□□ -0.8
CX3CL1-201ENST00000006053 HBQ1P09105 142 aa10.02□□□□□ -0.8
CX3CL1-201ENST00000006053 GSTM1P09488 218 aa10.02□□□□□ -0.8
CX3CL1-201ENST00000006053 IFI30P13284 250 aa10.02□□□□□ -0.8
CX3CL1-201ENST00000006053 HSD3B1P14060 373 aa10.02□□□□□ -0.8
CX3CL1-201ENST00000006053 HSD3B2P26439 372 aa10.02□□□□□ -0.8
CX3CL1-201ENST00000006053 NKX3-2P78367 333 aa10.02□□□□□ -0.8
CX3CL1-201ENST00000006053 RHAGQ02094 409 aa10.02□□□□□ -0.8
CX3CL1-201ENST00000006053 MPEG1Q2M385 716 aa10.02□□□□□ -0.8
CX3CL1-201ENST00000006053 PYDC2Q56P42 97 aa10.02□□□□□ -0.8
CX3CL1-201ENST00000006053 DEF8Q6ZN54 512 aa10.02□□□□□ -0.8
CX3CL1-201ENST00000006053 IQCF1Q8N6M8 205 aa10.02□□□□□ -0.8
CX3CL1-201ENST00000006053 CHST14Q8NCH0 376 aa10.02□□□□□ -0.8
CX3CL1-201ENST00000006053 MYLIPQ8WY64 445 aa10.02□□□□□ -0.8
CX3CL1-201ENST00000006053 WRAP53Q9BUR4 548 aaKnown RBP10.02□□□□□ -0.8
CX3CL1-201ENST00000006053 TSSK6Q9BXA6 273 aa10.02□□□□□ -0.8
CX3CL1-201ENST00000006053 UCK2Q9BZX2 261 aa10.02□□□□□ -0.8
CX3CL1-201ENST00000006053 SLC22A4Q9H015 551 aa10.02□□□□□ -0.8
CX3CL1-201ENST00000006053 C11orf54Q9H0W9 315 aaPredicted RBP10.02□□□□□ -0.8
CX3CL1-201ENST00000006053 TOR4AQ9NXH8 423 aa10.02□□□□□ -0.8
CX3CL1-201ENST00000006053 STOML2Q9UJZ1 356 aa10.02□□□□□ -0.8
CX3CL1-201ENST00000006053 STUB1Q9UNE7 303 aa10.02□□□□□ -0.8
CX3CL1-201ENST00000006053 KCNE2Q9Y6J6 123 aa10.02□□□□□ -0.8
CX3CL1-201ENST00000006053 AP1M2Q9Y6Q5 423 aa10.02□□□□□ -0.8
CX3CL1-201ENST00000006053 A0A1W2PQL4 384 aaPredicted RBP10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 A0A1W2PRB8 838 aa10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 C5orf58C9J3I9 102 aa10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 KLK1P06870 262 aa10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 TSPAN19P0C672 248 aa10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 M6PRP20645 277 aa10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 IMPA1P29218 277 aa10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 CSNK1DP48730 415 aa10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 LIM2P55344 173 aa10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 SLBPQ14493 270 aaKnown RBP eCLIP10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 LARS2Q15031 903 aaKnown RBP10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 ZNF630Q2M218 657 aaPredicted RBP10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 C22orf42Q6IC83 251 aa10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 USP30Q70CQ3 517 aa10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 ZNF438Q7Z4V0 828 aa10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 CAMKMTQ7Z624 323 aa10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 ZNF461Q8TAF7 563 aa10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 MKRN2Q9H000 416 aaKnown RBP10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 FAM83DQ9H4H8 585 aa10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 TVP23BQ9NYZ1 205 aa10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 MAPRE3Q9UPY8 281 aa10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 MAU2Q9Y6X3 613 aa10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 ZNF670-ZNF695F2Z2N8 137 aa10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 FFAR1O14842 300 aa10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 LRRTM2O43300 516 aa10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 GPR37L1O60883 481 aa10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 MYL9P24844 172 aa10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 LIMS1P48059 325 aa10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 XKP51811 444 aa10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 CTSCP53634 463 aa10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 HOXC5Q00444 222 aa10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 ZNF91Q05481 1191 aa10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 ZNF33BQ06732 778 aa10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 KCNC3Q14003 757 aa10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 SEC23BQ15437 767 aa10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 POM121L1PQ3SYA9 428 aa10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 CRB2Q5IJ48 1285 aa10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 C22orf39Q6P5X5 142 aa10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 TMIGD1Q6UXZ0 262 aa10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 RNF180Q86T96 592 aa10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 TMEM150AQ86TG1 271 aa10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 NOXA1Q86UR1 476 aa10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 CMTM8Q8IZV2 173 aa10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 SLC7A6Q92536 515 aa10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 MND1Q9BWT6 205 aa10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 SORBS1Q9BX66 1292 aaKnown RBP10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 TMEM38AQ9H6F2 299 aa10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 ZNF334Q9HCZ1 680 aaPredicted RBP10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 CFAP97Q9P2B7 532 aa10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 MALT1Q9UDY8 824 aa10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 ATP6V1HQ9UI12 483 aa10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 LSM7Q9UK45 103 aaKnown RBP10.02□□□□□ -0.81
CX3CL1-201ENST00000006053 PCM1Q15154 2024 aa10.01□□□□□ -0.81
CX3CL1-201ENST00000006053 ERVH48-1M5A8F1 160 aa10.01□□□□□ -0.81
CX3CL1-201ENST00000006053 GREM1O60565 184 aa10.01□□□□□ -0.81
CX3CL1-201ENST00000006053 TPST2O60704 377 aa10.01□□□□□ -0.81
CX3CL1-201ENST00000006053 BCHEP06276 602 aa10.01□□□□□ -0.81
CX3CL1-201ENST00000006053 YES1P07947 543 aa10.01□□□□□ -0.81
CX3CL1-201ENST00000006053 FURINP09958 794 aa10.01□□□□□ -0.81
CX3CL1-201ENST00000006053 OSMP13725 252 aa10.01□□□□□ -0.81
CX3CL1-201ENST00000006053 PDHA2P29803 388 aa10.01□□□□□ -0.81
CX3CL1-201ENST00000006053 ALDH9A1P49189 494 aa10.01□□□□□ -0.81
CX3CL1-201ENST00000006053 HMGA2P52926 109 aa10.01□□□□□ -0.81
CX3CL1-201ENST00000006053 HYAL2Q12891 473 aa10.01□□□□□ -0.81
CX3CL1-201ENST00000006053 C1DQ13901 141 aaKnown RBP10.01□□□□□ -0.81
CX3CL1-201ENST00000006053 PUM1Q14671 1186 aaKnown RBP eCLIP10.01□□□□□ -0.81
CX3CL1-201ENST00000006053 PRSS53Q2L4Q9 553 aa10.01□□□□□ -0.81
CX3CL1-201ENST00000006053 GPAT3Q53EU6 434 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms