RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 PNLDC1Q8NA58 520 aaKnown RBP9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 OR5T3Q8NGG3 340 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 FATE1Q969F0 183 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 TMBIM1Q969X1 311 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 BIRC7Q96CA5 298 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 BMFQ96LC9 184 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 OSBPL7Q9BZF2 842 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 ZBTB20Q9HC78 741 aaPredicted RBP9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 CD320Q9NPF0 282 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 TNFRSF10DQ9UBN6 386 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 MAGP20916 626 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 MAP3K8P41279 467 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 CBX5P45973 191 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 GDI2P50395 445 aaKnown RBP9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 TRIM61Q5EBN2 209 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 RBM44Q6ZP01 1051 aaKnown RBP9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 RASSF6Q6ZTQ3 369 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 PPP1R3BQ86XI6 285 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 MCFD2Q8NI22 146 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 TSSK6Q9BXA6 273 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 A0A1W2PQ72 361 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 H3BNX3 289 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 TOR1BO14657 336 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 ZNF208O43345 1280 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 HK1P19367 917 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 RACK1P63244 317 aaKnown RBP9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 MRPL49Q13405 166 aaKnown RBP9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 BTBD16Q32M84 506 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 TPRG1LQ5T0D9 272 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 LRIF1Q5T3J3 769 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 TLDC1Q6P9B6 456 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 HSDL2Q6YN16 418 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 CROCCP3Q8IVE0 287 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 SYNPOQ8N3V7 929 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 AGBL5Q8NDL9 886 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 OR2L5Q8NG80 312 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 OR52P1PQ8NH57 321 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 C9orf43Q8TAL5 461 aaPredicted RBP9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 CHFRQ96EP1 664 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 CNDP2Q96KP4 475 aaKnown RBP9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 ZNF317Q96PQ6 595 aaPredicted RBP9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 C1QTNF1Q9BXJ1 281 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 KCNK12Q9HB15 430 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 RBMXL2O75526 392 aaKnown RBP9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 TRMUO75648 421 aaKnown RBP9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 SRFP11831 508 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 ZNF84P51523 738 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 MRPL58Q14197 206 aaKnown RBP9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 SF3B4Q15427 424 aaKnown RBP eCLIP9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 UGT3A2Q3SY77 523 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 NANOGP8Q6NSW7 305 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 LARP4Q71RC2 724 aaKnown RBP eCLIP9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 SLC5A8Q8N695 610 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 CLEC1AQ8NC01 280 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 SNRNP27Q8WVK2 155 aaKnown RBP9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 KCNN1Q92952 543 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 OR1F2PQ96R84 312 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 ORAI3Q9BRQ5 295 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 PDCD10Q9BUL8 212 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 POLDIP3Q9BY77 421 aaKnown RBP9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 DSN1Q9H410 356 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 NANOGQ9H9S0 305 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 PTRH2Q9Y3E5 179 aaKnown RBP9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 KIAA0100Q14667 2235 aaKnown RBP9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 CCDC182A6NF36 153 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 KLHL18O94889 574 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 CD27P26842 260 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 QPRTQ15274 297 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 FAM131AQ6UXB0 335 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 CARM1Q86X55 608 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 FKBP10Q96AY3 582 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 CPNE2Q96FN4 548 aaPredicted RBP9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 HS6ST2Q96MM7 605 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 TBX5Q99593 518 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 GORASP1Q9BQQ3 440 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 ALOXE3Q9BYJ1 711 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 UPB1Q9UBR1 384 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 CA5BQ9Y2D0 317 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 PCDHB14Q9Y5E9 798 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 ABCA3Q99758 1704 aa9.89□□□□□ -0.83
NIPAL3-201ENST00000003912 VSTM2BA6NLU5 285 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 IGHEP01854 428 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 DBIP07108 87 aaKnown RBP9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 ZNF888P0CJ79 500 aaPredicted RBP9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 OR2B6P58173 313 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 VMACQ2NL98 169 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 C18orf21Q32NC0 220 aaPredicted RBP9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 TM9SF4Q92544 642 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 TANKQ92844 425 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 HS3ST3A1Q9Y663 406 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 BLACEA4D250 179 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 ITGA10O75578 1167 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 GLULP15104 373 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 PGGT1BP53609 377 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 RPE65Q16518 533 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 ZNF789Q5FWF6 425 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 ADAMTSL4Q6UY14 1074 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 CDHR3Q6ZTQ4 885 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms