RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Ska1Q9CPV1 254 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 Ssr2Q9CPW5 183 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 PinlypQ9CQD7 212 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 Gm14862B1AV28 81 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 Zcchc7B1AX39 541 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 Gm340F6RGI3 1242 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 Gm5152L7N200 190 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 Vmn2r102L7N279 857 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 Zw10O54692 779 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 Zp3P10761 424 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 Zdhhc11Q14AK4 347 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 Arntl2Q2VPD4 579 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 Glt8d2Q640P4 349 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 PtprcapQ64697 197 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 Pced1aQ6P1Z5 449 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 Hsfy2Q80Y37 392 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 Banf2Q8BVR0 90 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 BroxQ8K2Q7 411 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 Vmn1r6Q8R2D4 303 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 Olfr689Q8VG18 320 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 Olfr1250Q8VGM3 314 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 Olfr380Q8VGT3 311 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 Rnf144aQ925F3 292 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 Fis1Q9CQ92 152 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 Ndufs4Q9CXZ1 175 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 Prl8a6Q9DAY2 240 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 Arpc3Q9JM76 178 aaKnown RBP15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 Zfp599E9PWP1 548 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 Vmn2r97K7N6Z2 861 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 Vmn2r93L7N1Z9 857 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 Pcmt1P23506 227 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 Apoa1Q00623 264 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 Hsf5Q5ND04 624 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 Vsx2Q61412 361 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 Znf503Q7TMA2 652 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 ChdhQ8BJ64 596 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 Smyd4Q8BTK5 799 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 Pithd1Q8BWR2 211 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 Epm2aip1Q8VEH5 606 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 Ing3Q8VEK6 421 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 Olfr952Q8VFD7 314 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 Eif3mQ99JX4 374 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 Nudt17Q9CWD3 296 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 Chaf1bQ9D0N7 572 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 9230112D13RikQ9D260 137 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 Trpv4Q9EPK8 871 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 Olfr955Q9EQ97 314 aa15.11■□□□□ 0.01
Trim39-203ENSMUST00000113706 Pgm2A2CEK3 580 aa15.1■□□□□ 0.01
Trim39-203ENSMUST00000113706 Gria1P23818 907 aa15.1■□□□□ 0.01
Trim39-203ENSMUST00000113706 AcadvlP50544 656 aa15.1■□□□□ 0.01
Trim39-203ENSMUST00000113706 MagixQ4KL35 324 aa15.1■□□□□ 0.01
Trim39-203ENSMUST00000113706 Trim17Q7TPM3 477 aa15.1■□□□□ 0.01
Trim39-203ENSMUST00000113706 Btnl1Q7TST0 509 aa15.1■□□□□ 0.01
Trim39-203ENSMUST00000113706 Prr5Q812A5 387 aa15.1■□□□□ 0.01
Trim39-203ENSMUST00000113706 Trmt12Q8BG71 446 aa15.1■□□□□ 0.01
Trim39-203ENSMUST00000113706 Prpf18Q8BM39 342 aa15.1■□□□□ 0.01
Trim39-203ENSMUST00000113706 Shisa7Q8C3Q5 558 aa15.1■□□□□ 0.01
Trim39-203ENSMUST00000113706 Q8K207 121 aa15.1■□□□□ 0.01
Trim39-203ENSMUST00000113706 Guca1bQ8VBV8 201 aa15.1■□□□□ 0.01
Trim39-203ENSMUST00000113706 Olfr53Q8VGL8 312 aa15.1■□□□□ 0.01
Trim39-203ENSMUST00000113706 Arrb2Q91YI4 410 aa15.1■□□□□ 0.01
Trim39-203ENSMUST00000113706 HhatlQ9D1G3 503 aa15.1■□□□□ 0.01
Trim39-203ENSMUST00000113706 Rdh11Q9QYF1 316 aa15.1■□□□□ 0.01
Trim39-203ENSMUST00000113706 Chd7A2AJK6 2986 aaKnown RBP15.1■□□□□ 0.01
Trim39-203ENSMUST00000113706 Fbxw9F8VPX2 458 aa15.1■□□□□ 0.01
Trim39-203ENSMUST00000113706 AurkcO88445 282 aa15.1■□□□□ 0.01
Trim39-203ENSMUST00000113706 Tm9sf2P58021 662 aa15.1■□□□□ 0.01
Trim39-203ENSMUST00000113706 Actr1aP61164 376 aa15.1■□□□□ 0.01
Trim39-203ENSMUST00000113706 Dlx5P70396 289 aa15.1■□□□□ 0.01
Trim39-203ENSMUST00000113706 UnklQ5FWH2 727 aaKnown RBP15.1■□□□□ 0.01
Trim39-203ENSMUST00000113706 Cdh7Q8BM92 785 aa15.1■□□□□ 0.01
Trim39-203ENSMUST00000113706 Hat1Q8BY71 416 aa15.1■□□□□ 0.01
Trim39-203ENSMUST00000113706 Pramef8Q8CE24 480 aa15.1■□□□□ 0.01
Trim39-203ENSMUST00000113706 Vmn1r81Q8R286 306 aa15.1■□□□□ 0.01
Trim39-203ENSMUST00000113706 Foxe1Q8R2I0 371 aa15.1■□□□□ 0.01
Trim39-203ENSMUST00000113706 Actr1bQ8R5C5 376 aa15.1■□□□□ 0.01
Trim39-203ENSMUST00000113706 Retreg1dQ8VE91 480 aa15.1■□□□□ 0.01
Trim39-203ENSMUST00000113706 Klhdc8aQ91XA8 350 aa15.1■□□□□ 0.01
Trim39-203ENSMUST00000113706 Q9CZV2 255 aa15.1■□□□□ 0.01
Trim39-203ENSMUST00000113706 Acbd7Q9D258 88 aa15.1■□□□□ 0.01
Trim39-203ENSMUST00000113706 Rgs1Q9JL25 209 aa15.1■□□□□ 0.01
Trim39-203ENSMUST00000113706 Uba2Q9Z1F9 638 aa15.1■□□□□ 0.01
Trim39-203ENSMUST00000113706 Rhbdl2A2AGA4 302 aa15.09■□□□□ 0.01
Trim39-203ENSMUST00000113706 Gm6619F6URP1 175 aa15.09■□□□□ 0.01
Trim39-203ENSMUST00000113706 ChadO55226 358 aa15.09■□□□□ 0.01
Trim39-203ENSMUST00000113706 Mtnd2P03893 345 aa15.09■□□□□ 0.01
Trim39-203ENSMUST00000113706 Zfp59P16373 634 aa15.09■□□□□ 0.01
Trim39-203ENSMUST00000113706 FasP25446 327 aa15.09■□□□□ 0.01
Trim39-203ENSMUST00000113706 Idh2P54071 452 aaKnown RBP15.09■□□□□ 0.01
Trim39-203ENSMUST00000113706 EvlP70429 414 aa15.09■□□□□ 0.01
Trim39-203ENSMUST00000113706 MitfQ08874 526 aa15.09■□□□□ 0.01
Trim39-203ENSMUST00000113706 D17Wsu92eQ3TT38 291 aa15.09■□□□□ 0.01
Trim39-203ENSMUST00000113706 E330014E10RikQ3UL33 481 aa15.09■□□□□ 0.01
Trim39-203ENSMUST00000113706 Ankrd42Q3V096 527 aa15.09■□□□□ 0.01
Trim39-203ENSMUST00000113706 D5Ertd577eQ499F0 481 aa15.09■□□□□ 0.01
Trim39-203ENSMUST00000113706 Nxf3Q4ZGD9 553 aa15.09■□□□□ 0.01
Trim39-203ENSMUST00000113706 Cdh12Q5RJH3 794 aa15.09■□□□□ 0.01
Trim39-203ENSMUST00000113706 RflnbQ5SVD0 216 aa15.09■□□□□ 0.01
Trim39-203ENSMUST00000113706 Apex2Q68G58 516 aa15.09■□□□□ 0.01
Trim39-203ENSMUST00000113706 Cnih3Q6ZWS4 160 aa15.09■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 36.3 ms