RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Adamtsl5D3Z689 485 aa17.5■□□□□ 0.39
Trim47-202ENSMUST00000106441 Vmn1r88E9Q235 316 aa17.5■□□□□ 0.39
Trim47-202ENSMUST00000106441 Zfp169E9Q3R6 731 aa17.5■□□□□ 0.39
Trim47-202ENSMUST00000106441 A530032D15RikE9Q422 215 aa17.5■□□□□ 0.39
Trim47-202ENSMUST00000106441 G430095P16RikE9Q913 147 aa17.5■□□□□ 0.39
Trim47-202ENSMUST00000106441 Psmc3ipO35047 217 aa17.5■□□□□ 0.39
Trim47-202ENSMUST00000106441 Atp1b2P14231 290 aa17.5■□□□□ 0.39
Trim47-202ENSMUST00000106441 Il1rnP25085 178 aa17.5■□□□□ 0.39
Trim47-202ENSMUST00000106441 Cd19P25918 547 aa17.5■□□□□ 0.39
Trim47-202ENSMUST00000106441 Rab12P35283 243 aa17.5■□□□□ 0.39
Trim47-202ENSMUST00000106441 Igfbp2P47877 305 aa17.5■□□□□ 0.39
Trim47-202ENSMUST00000106441 CtskP55097 329 aa17.5■□□□□ 0.39
Trim47-202ENSMUST00000106441 Gfi1P70338 423 aa17.5■□□□□ 0.39
Trim47-202ENSMUST00000106441 Hsd17b3P70385 305 aa17.5■□□□□ 0.39
Trim47-202ENSMUST00000106441 Ankrd28Q505D1 1053 aa17.5■□□□□ 0.39
Trim47-202ENSMUST00000106441 Adamtsl4Q80T21 1036 aa17.5■□□□□ 0.39
Trim47-202ENSMUST00000106441 Ly6g5cQ8K1T5 149 aa17.5■□□□□ 0.39
Trim47-202ENSMUST00000106441 Cldn7Q9Z261 211 aa17.5■□□□□ 0.39
Trim47-202ENSMUST00000106441 Gm7173A0A0G2JEB6 3132 aa17.5■□□□□ 0.39
Trim47-202ENSMUST00000106441 AccsA2AIG8 502 aa17.49■□□□□ 0.39
Trim47-202ENSMUST00000106441 Tgm7A2ART8 616 aa17.49■□□□□ 0.39
Trim47-202ENSMUST00000106441 Mgat4eA6H684 439 aa17.49■□□□□ 0.39
Trim47-202ENSMUST00000106441 Hpse2B2RY83 592 aa17.49■□□□□ 0.39
Trim47-202ENSMUST00000106441 Gm6811E9Q3Y8 510 aa17.49■□□□□ 0.39
Trim47-202ENSMUST00000106441 AF366264G3X9P9 502 aa17.49■□□□□ 0.39
Trim47-202ENSMUST00000106441 Ctla2aP12399 137 aa17.49■□□□□ 0.39
Trim47-202ENSMUST00000106441 Ica1P97411 478 aa17.49■□□□□ 0.39
Trim47-202ENSMUST00000106441 MedagQ14BA6 303 aa17.49■□□□□ 0.39
Trim47-202ENSMUST00000106441 CdonQ32MD9 1250 aa17.49■□□□□ 0.39
Trim47-202ENSMUST00000106441 Ulk3Q3U3Q1 472 aa17.49■□□□□ 0.39
Trim47-202ENSMUST00000106441 Fam196aQ3USH1 422 aa17.49■□□□□ 0.39
Trim47-202ENSMUST00000106441 Heatr6Q6P1G0 1184 aaKnown RBP17.49■□□□□ 0.39
Trim47-202ENSMUST00000106441 Il20raQ6PHB0 546 aa17.49■□□□□ 0.39
Trim47-202ENSMUST00000106441 Kiaa0895Q7TQE7 519 aa17.49■□□□□ 0.39
Trim47-202ENSMUST00000106441 Zbtb20Q8K0L9 741 aa17.49■□□□□ 0.39
Trim47-202ENSMUST00000106441 Vmn1r214Q8R279 367 aa17.49■□□□□ 0.39
Trim47-202ENSMUST00000106441 Vps4aQ8VEJ9 437 aa17.49■□□□□ 0.39
Trim47-202ENSMUST00000106441 Tmem168Q91VX9 697 aa17.49■□□□□ 0.39
Trim47-202ENSMUST00000106441 Aar2Q9D2V5 384 aa17.49■□□□□ 0.39
Trim47-202ENSMUST00000106441 Kcne2Q9D808 123 aa17.49■□□□□ 0.39
Trim47-202ENSMUST00000106441 Aph1cQ9DCZ9 258 aa17.49■□□□□ 0.39
Trim47-202ENSMUST00000106441 Vnn3Q9QZ25 500 aa17.49■□□□□ 0.39
Trim47-202ENSMUST00000106441 Aloxe3Q9WV07 711 aa17.49■□□□□ 0.39
Trim47-202ENSMUST00000106441 Rhox2dW4VSN9 191 aa17.49■□□□□ 0.39
Trim47-202ENSMUST00000106441 Igkv6-29A0A0G2JEI6 115 aa17.49■□□□□ 0.39
Trim47-202ENSMUST00000106441 A0A286YDU1 74 aa17.49■□□□□ 0.39
Trim47-202ENSMUST00000106441 Hnf4aP49698 474 aa17.49■□□□□ 0.39
Trim47-202ENSMUST00000106441 Havcr1Q5QNS5 305 aa17.49■□□□□ 0.39
Trim47-202ENSMUST00000106441 Prrg3Q6PAQ9 231 aa17.49■□□□□ 0.39
Trim47-202ENSMUST00000106441 Olfr1015Q7TR94 312 aa17.49■□□□□ 0.39
Trim47-202ENSMUST00000106441 IpmkQ7TT16 396 aa17.49■□□□□ 0.39
Trim47-202ENSMUST00000106441 Hamp2Q80T19 83 aa17.49■□□□□ 0.39
Trim47-202ENSMUST00000106441 CpmQ80V42 443 aa17.49■□□□□ 0.39
Trim47-202ENSMUST00000106441 Sephs1Q8BH69 392 aa17.49■□□□□ 0.39
Trim47-202ENSMUST00000106441 ZwilchQ8R060 589 aa17.49■□□□□ 0.39
Trim47-202ENSMUST00000106441 FggQ8VCM7 436 aa17.49■□□□□ 0.39
Trim47-202ENSMUST00000106441 Mat1aQ91X83 396 aaKnown RBP17.49■□□□□ 0.39
Trim47-202ENSMUST00000106441 Uqcc2Q9CQY6 136 aa17.49■□□□□ 0.39
Trim47-202ENSMUST00000106441 Olfr701Q9D3U9 316 aa17.49■□□□□ 0.39
Trim47-202ENSMUST00000106441 Ift46Q9DB07 301 aa17.49■□□□□ 0.39
Trim47-202ENSMUST00000106441 Cd302Q9DCG2 228 aa17.49■□□□□ 0.39
Trim47-202ENSMUST00000106441 Ascl3Q9JJR7 174 aa17.49■□□□□ 0.39
Trim47-202ENSMUST00000106441 Atp6ap1Q9R1Q9 463 aa17.49■□□□□ 0.39
Trim47-202ENSMUST00000106441 Gm13090A2A899 111 aa17.48■□□□□ 0.39
Trim47-202ENSMUST00000106441 CatsperbA2RTF1 1109 aa17.48■□□□□ 0.39
Trim47-202ENSMUST00000106441 Gm21800J3QMJ9 180 aa17.48■□□□□ 0.39
Trim47-202ENSMUST00000106441 GypaP14220 168 aa17.48■□□□□ 0.39
Trim47-202ENSMUST00000106441 Rpl6P47911 296 aaKnown RBP17.48■□□□□ 0.39
Trim47-202ENSMUST00000106441 GcgP55095 180 aa17.48■□□□□ 0.39
Trim47-202ENSMUST00000106441 Dab1P97318 588 aa17.48■□□□□ 0.39
Trim47-202ENSMUST00000106441 Tex10Q3URQ0 928 aaKnown RBP17.48■□□□□ 0.39
Trim47-202ENSMUST00000106441 Prkg2Q61410 762 aa17.48■□□□□ 0.39
Trim47-202ENSMUST00000106441 Zbtb46Q8BID6 600 aa17.48■□□□□ 0.39
Trim47-202ENSMUST00000106441 Zbtb49Q8BXX2 756 aa17.48■□□□□ 0.39
Trim47-202ENSMUST00000106441 McatQ8R3F5 381 aaKnown RBP17.48■□□□□ 0.39
Trim47-202ENSMUST00000106441 Olfr986Q8VFN6 312 aa17.48■□□□□ 0.39
Trim47-202ENSMUST00000106441 Spz1Q99MY0 378 aa17.48■□□□□ 0.39
Trim47-202ENSMUST00000106441 Ankra2Q99PE2 312 aa17.48■□□□□ 0.39
Trim47-202ENSMUST00000106441 LipfQ9CPP7 395 aa17.48■□□□□ 0.39
Trim47-202ENSMUST00000106441 Slco2a1Q9EPT5 643 aa17.48■□□□□ 0.39
Trim47-202ENSMUST00000106441 Lat2Q9JHL0 203 aa17.48■□□□□ 0.39
Trim47-202ENSMUST00000106441 Gm7792A0A0J9YU01 481 aa17.47■□□□□ 0.39
Trim47-202ENSMUST00000106441 Iqca1lA6H690 825 aa17.47■□□□□ 0.39
Trim47-202ENSMUST00000106441 Gm3183D3YUJ6 481 aa17.47■□□□□ 0.39
Trim47-202ENSMUST00000106441 Tgfbr3lD3YZZ2 297 aa17.47■□□□□ 0.39
Trim47-202ENSMUST00000106441 Olfr287E9PZS7 322 aa17.47■□□□□ 0.39
Trim47-202ENSMUST00000106441 Gm3139J3QK78 481 aa17.47■□□□□ 0.39
Trim47-202ENSMUST00000106441 Gm3106J3QPH3 481 aa17.47■□□□□ 0.39
Trim47-202ENSMUST00000106441 Kcnj1O88335 372 aa17.47■□□□□ 0.39
Trim47-202ENSMUST00000106441 Mup4P11590 178 aa17.47■□□□□ 0.39
Trim47-202ENSMUST00000106441 Hnrnpa1P49312 320 aaKnown RBP17.47■□□□□ 0.39
Trim47-202ENSMUST00000106441 Copz1P61924 177 aa17.47■□□□□ 0.39
Trim47-202ENSMUST00000106441 Cd80Q00609 306 aa17.47■□□□□ 0.39
Trim47-202ENSMUST00000106441 ClpbQ60649 677 aa17.47■□□□□ 0.39
Trim47-202ENSMUST00000106441 DgkbQ6NS52 802 aa17.47■□□□□ 0.39
Trim47-202ENSMUST00000106441 Cstf2Q8BIQ5 580 aaKnown RBP17.47■□□□□ 0.39
Trim47-202ENSMUST00000106441 Fam131aQ8BWU3 361 aa17.47■□□□□ 0.39
Trim47-202ENSMUST00000106441 Slitrk6Q8C110 840 aa17.47■□□□□ 0.39
Trim47-202ENSMUST00000106441 Bpifb2Q8C1E1 462 aa17.47■□□□□ 0.39
Trim47-202ENSMUST00000106441 Olfr693Q8VF89 316 aa17.47■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms