RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Itgb2lQ3UV74 738 aa8.26□□□□□ -1.09
Trim39-201ENSMUST00000042717 Ahcyl1Q80SW1 530 aa8.26□□□□□ -1.09
Trim39-201ENSMUST00000042717 Ttc29Q80VM3 471 aa8.26□□□□□ -1.09
Trim39-201ENSMUST00000042717 Acbd3Q8BMP6 525 aa8.26□□□□□ -1.09
Trim39-201ENSMUST00000042717 PigwQ8C398 503 aa8.26□□□□□ -1.09
Trim39-201ENSMUST00000042717 Slc25a45Q8CFJ7 288 aa8.26□□□□□ -1.09
Trim39-201ENSMUST00000042717 Tp53bp2Q8CG79 1128 aa8.26□□□□□ -1.09
Trim39-201ENSMUST00000042717 Ifnl3Q8CGK6 193 aa8.26□□□□□ -1.09
Trim39-201ENSMUST00000042717 Adam4Q8CGQ2 763 aa8.26□□□□□ -1.09
Trim39-201ENSMUST00000042717 Sdr9c7Q8K3P0 313 aa8.26□□□□□ -1.09
Trim39-201ENSMUST00000042717 NclnQ8VCM8 563 aaKnown RBP8.26□□□□□ -1.09
Trim39-201ENSMUST00000042717 Smap1Q91VZ6 440 aa8.26□□□□□ -1.09
Trim39-201ENSMUST00000042717 Slc25a36Q922G0 311 aa8.26□□□□□ -1.09
Trim39-201ENSMUST00000042717 Ccdc3Q9D6Y1 273 aa8.26□□□□□ -1.09
Trim39-201ENSMUST00000042717 Prl8a1Q9DAV8 240 aa8.26□□□□□ -1.09
Trim39-201ENSMUST00000042717 Ca5bQ9QZA0 317 aa8.26□□□□□ -1.09
Trim39-201ENSMUST00000042717 HnrnpcQ9Z204 313 aaKnown RBP8.26□□□□□ -1.09
Trim39-201ENSMUST00000042717 Gm35315A0A1B0GRI2 571 aa8.26□□□□□ -1.09
Trim39-201ENSMUST00000042717 Gm14147A2AQX6 640 aa8.26□□□□□ -1.09
Trim39-201ENSMUST00000042717 Slc43a3A2AVZ9 502 aa8.26□□□□□ -1.09
Trim39-201ENSMUST00000042717 Aldoart2A6ZI47 364 aa8.26□□□□□ -1.09
Trim39-201ENSMUST00000042717 Fbxw9F8VPX2 458 aa8.26□□□□□ -1.09
Trim39-201ENSMUST00000042717 AldocP05063 363 aa8.26□□□□□ -1.09
Trim39-201ENSMUST00000042717 Klk1b8P07628 261 aa8.26□□□□□ -1.09
Trim39-201ENSMUST00000042717 Rab8aP55258 207 aa8.26□□□□□ -1.09
Trim39-201ENSMUST00000042717 H2-Q6P79568 326 aa8.26□□□□□ -1.09
Trim39-201ENSMUST00000042717 Olfr681Q3SXH8 315 aa8.26□□□□□ -1.09
Trim39-201ENSMUST00000042717 Tas2r106Q7M724 308 aa8.26□□□□□ -1.09
Trim39-201ENSMUST00000042717 Olfr1231Q7TQZ8 313 aa8.26□□□□□ -1.09
Trim39-201ENSMUST00000042717 Tex13c3Q810P0 219 aa8.26□□□□□ -1.09
Trim39-201ENSMUST00000042717 Slc26a9Q8BU91 790 aa8.26□□□□□ -1.09
Trim39-201ENSMUST00000042717 Zc3h10Q8R205 435 aaKnown RBP8.26□□□□□ -1.09
Trim39-201ENSMUST00000042717 Oard1Q8R5F3 152 aa8.26□□□□□ -1.09
Trim39-201ENSMUST00000042717 Zfp709Q8VC29 727 aa8.26□□□□□ -1.09
Trim39-201ENSMUST00000042717 NrmQ8VC65 262 aa8.26□□□□□ -1.09
Trim39-201ENSMUST00000042717 Gpn2Q8VEJ1 310 aa8.26□□□□□ -1.09
Trim39-201ENSMUST00000042717 Olfr679Q8VGV0 315 aa8.26□□□□□ -1.09
Trim39-201ENSMUST00000042717 Mtif2Q91YJ5 727 aaKnown RBP8.26□□□□□ -1.09
Trim39-201ENSMUST00000042717 Yipf2Q99LP8 312 aa8.26□□□□□ -1.09
Trim39-201ENSMUST00000042717 TympQ99N42 471 aa8.26□□□□□ -1.09
Trim39-201ENSMUST00000042717 Txndc9Q9CQ79 226 aa8.26□□□□□ -1.09
Trim39-201ENSMUST00000042717 Cd302Q9DCG2 228 aa8.26□□□□□ -1.09
Trim39-201ENSMUST00000042717 Inpp5eQ9JII1 647 aa8.26□□□□□ -1.09
Trim39-201ENSMUST00000042717 Dock4P59764 1978 aa8.26□□□□□ -1.09
Trim39-201ENSMUST00000042717 9930021J03RikH3BKP8 2027 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Spats1A2RRY8 269 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Gm20509G3UZF1 325 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Gm8897L7N294 181 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Lhx8O35652 367 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 EdaO54693 391 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Cyp2j5O54749 501 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Cacng1O70578 223 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Ets2P15037 468 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Ptpn6P29351 595 aaKnown RBP8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Msr1P30204 458 aaKnown RBP8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Tbx6P70327 436 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Casp3P70677 277 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 B3gnt4Q1RLK6 350 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 ClpbQ60649 677 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 PmlQ60953 885 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 FaddQ61160 205 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Map3k7Q62073 579 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Carnmt1Q80UY1 400 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 CyrenQ8BHZ5 157 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Ifi44Q8BV66 422 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Larp4Q8BWW4 719 aaKnown RBP8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Gpr22Q8BZL4 432 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Slitrk6Q8C110 840 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Pramef8Q8CE24 480 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Fmo2Q8K2I3 535 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Clrn1Q8K445 232 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Vmn1r38Q8R2E1 302 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Grip1Q925T6 1127 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Otub2Q9CQX0 234 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Pcbd2Q9CZL5 136 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Kat8Q9D1P2 458 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Oc90Q9Z0L3 485 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Fam84bD3YXJ5 310 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Vmn2r34E9PVI0 852 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Gpr179E9PY61 2293 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Coq10aE9Q3H6 259 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Herc6F2Z461 1003 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Vmn2r37F8VQD3 802 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Vmn1r20K7N778 303 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 IghmP01872 454 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 MdkP12025 140 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 PahP16331 453 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Slc6a12P31651 614 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Notch4P31695 1964 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 CapzbP47757 277 aaKnown RBP8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Ppp3cbP48453 525 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Tas2r7P59530 312 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 PhexP70669 749 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Ptpn2Q06180 406 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Pros1Q08761 675 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Gpr39Q5U431 456 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Sim2Q61079 657 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Mapk10Q61831 464 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Tmbim1Q8BJZ3 309 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Kirrel3Q8BR86 778 aa8.25□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 56.6 ms