RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 Nat3P50296 290 aa18.23■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 SnrpgP62309 76 aaKnown RBP18.23■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Cds1P98191 461 aa18.23■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 CrxosQ3UL53 246 aa18.23■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Stox2Q499E5 926 aa18.23■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Map4k2Q61161 821 aa18.23■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Supv3l1Q80YD1 779 aaKnown RBP18.23■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 4933430I17RikQ8BHW4 495 aa18.23■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Slc9a7Q8BLV3 726 aa18.23■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Cmtr2Q8BWQ4 767 aa18.23■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Zbtb9Q8CDC7 459 aa18.23■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 CcsapQ8QZT2 252 aa18.23■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 NrarpQ91ZA8 114 aa18.23■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 NgrnQ99KS2 293 aaKnown RBP18.23■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Lgals2Q9CQW5 130 aa18.23■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Cndp2Q9D1A2 475 aaKnown RBP18.23■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Izumo2Q9DA16 220 aa18.23■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 NpvfQ9ESQ8 188 aa18.23■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Upk3aQ9JKX8 287 aa18.23■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Slc5a3Q9JKZ2 718 aa18.23■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Socs6Q9JLY0 533 aa18.23■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Olfr742A2RTP5 311 aa18.22■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Vmn2r7E9PYL5 915 aa18.22■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Gm8127E9Q0P0 100 aa18.22■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Gm21319F6YNI8 144 aa18.22■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Smim18J3QNP2 93 aa18.22■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Gm8094K7N6U8 211 aa18.22■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 C1dO35473 141 aa18.22■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 S100a6P14069 89 aa18.22■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Zfp37P17141 594 aa18.22■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 FurinP23188 793 aa18.22■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 OcmP51879 109 aa18.22■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Dusp5Q1HL35 384 aa18.22■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Cpxcr1Q3V0P1 322 aa18.22■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Nadsyn1Q711T7 725 aa18.22■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Ppp2r1bQ7TNP2 601 aaKnown RBP18.22■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Olfr1152Q7TR34 310 aa18.22■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Olfr128Q7TRJ1 308 aa18.22■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Rbm45Q8BHN5 476 aaKnown RBP18.22■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Shc2Q8BMC3 573 aa18.22■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Glt28d2Q8BML3 165 aa18.22■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Mcfd2Q8K5B2 145 aa18.22■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Olfr1469Q8VFW5 309 aa18.22■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Fam45aQ9D8N2 357 aa18.22■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Ropn1lQ9EQ00 218 aa18.22■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Ndel1Q9ERR1 345 aa18.22■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Acot2Q9QYR9 453 aa18.22■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Gm13285B1AYI3 182 aa18.21■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Gm13275B1AYI8 182 aa18.21■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Slc22a28B2RT89 552 aa18.21■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Olfr544E9PX47 334 aa18.21■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 8030474K03RikE9Q4Y8 554 aa18.21■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Prss56F2YMG0 604 aa18.21■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Ccl26F8VQM2 93 aa18.21■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Slc6a2O55192 617 aa18.21■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Cd160O88875 185 aa18.21■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Klkb1P26262 638 aa18.21■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Lman2lP59481 347 aa18.21■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Spata13Q5DU57 656 aa18.21■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Cep44Q5HZK1 386 aa18.21■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Gpr17Q6NS65 339 aa18.21■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Slc39a9Q8BFU1 308 aa18.21■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 IfnzQ8BQT1 182 aa18.21■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Clec9aQ8BRU4 238 aa18.21■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Gm13278Q8CD73 182 aa18.21■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Gm5591Q8CDK1 855 aa18.21■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Wdr74Q8VCG3 384 aa18.21■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Slc22a30Q96LX3 552 aa18.21■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Gpr146Q99LE2 333 aa18.21■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Exosc1Q9DAA6 195 aaKnown RBP18.21■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Wwp2Q9DBH0 870 aa18.21■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Dpysl5Q9EQF6 564 aa18.21■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Ubqln2Q9QZM0 638 aa18.21■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 CerklA2AQH1 525 aa18.21■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Esp18A8R0V1 91 aa18.21■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Lsm2O35900 95 aaKnown RBP18.21■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Foxq1O70220 400 aa18.21■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Ubl4aP21126 157 aaKnown RBP18.21■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Man2a1P27046 1150 aa18.21■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 DcnP28654 354 aa18.21■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Pcbp3P57722 371 aaKnown RBP18.21■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Rad51Q08297 339 aa18.21■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Cxcl3Q6W5C0 100 aa18.21■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Olfr744Q7TRM0 323 aa18.21■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Fbxl4Q8BH70 621 aa18.21■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Nlgn3Q8BYM5 825 aa18.21■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Slc41a2Q8BYR8 573 aa18.21■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Camk1Q91YS8 374 aa18.21■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Atp5f1Q9CQQ7 256 aaKnown RBP18.21■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Bloc1s6Q9R0C0 172 aa18.21■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Gm17190V9GX38 357 aa18.21■□□□□ 0.51
Ccdc50-201ENSMUST00000039443 Mamdc4A2AJA7 1228 aa18.2■□□□□ 0.5
Ccdc50-201ENSMUST00000039443 Phox2bO35690 314 aa18.2■□□□□ 0.5
Ccdc50-201ENSMUST00000039443 Stmn3O70166 180 aa18.2■□□□□ 0.5
Ccdc50-201ENSMUST00000039443 Bmp7P23359 430 aa18.2■□□□□ 0.5
Ccdc50-201ENSMUST00000039443 Rps13P62301 151 aaKnown RBP18.2■□□□□ 0.5
Ccdc50-201ENSMUST00000039443 Polr2lP62876 67 aa18.2■□□□□ 0.5
Ccdc50-201ENSMUST00000039443 Kcna7Q17ST2 489 aa18.2■□□□□ 0.5
Ccdc50-201ENSMUST00000039443 Cdk10Q3UMM4 360 aa18.2■□□□□ 0.5
Ccdc50-201ENSMUST00000039443 Nutm2Q3V0C3 733 aa18.2■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 21.6 ms