RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 SHANK1Q9Y566 2161 aa20.38■□□□□ 0.85
SCN1B-206ENST00000638536 SAGE2PA6NJ88 616 aa20.37■□□□□ 0.85
SCN1B-206ENST00000638536 A8MUI8 341 aa20.37■□□□□ 0.85
SCN1B-206ENST00000638536 DPM1O60762 260 aa20.37■□□□□ 0.85
SCN1B-206ENST00000638536 ULK1O75385 1050 aa20.37■□□□□ 0.85
SCN1B-206ENST00000638536 MYO1DO94832 1006 aa20.37■□□□□ 0.85
SCN1B-206ENST00000638536 F10P00742 488 aa20.37■□□□□ 0.85
SCN1B-206ENST00000638536 KRT6AP02538 564 aa20.37■□□□□ 0.85
SCN1B-206ENST00000638536 KRT6BP04259 564 aa20.37■□□□□ 0.85
SCN1B-206ENST00000638536 ICAM2P13598 275 aa20.37■□□□□ 0.85
SCN1B-206ENST00000638536 ARRB2P32121 409 aa20.37■□□□□ 0.85
SCN1B-206ENST00000638536 KRT6CP48668 564 aa20.37■□□□□ 0.85
SCN1B-206ENST00000638536 TNFRSF17Q02223 184 aa20.37■□□□□ 0.85
SCN1B-206ENST00000638536 MPP2Q14168 576 aa20.37■□□□□ 0.85
SCN1B-206ENST00000638536 PLEKHN1Q494U1 663 aaPredicted RBP20.37■□□□□ 0.85
SCN1B-206ENST00000638536 CYP20A1Q6UW02 462 aa20.37■□□□□ 0.85
SCN1B-206ENST00000638536 LRIG3Q6UXM1 1119 aa20.37■□□□□ 0.85
SCN1B-206ENST00000638536 M1APQ8TC57 530 aa20.37■□□□□ 0.85
SCN1B-206ENST00000638536 RPF2Q9H7B2 306 aaKnown RBP20.37■□□□□ 0.85
SCN1B-206ENST00000638536 MID2Q9UJV3 735 aa20.37■□□□□ 0.85
SCN1B-206ENST00000638536 TENM4Q6N022 2769 aa20.36■□□□□ 0.85
SCN1B-206ENST00000638536 A0A1W2PS29 197 aa20.36■□□□□ 0.85
SCN1B-206ENST00000638536 ERLIN1O75477 346 aa20.36■□□□□ 0.85
SCN1B-206ENST00000638536 AIFM1O95831 613 aa20.36■□□□□ 0.85
SCN1B-206ENST00000638536 ENO1P06733 434 aaKnown RBP20.36■□□□□ 0.85
SCN1B-206ENST00000638536 CHRNGP07510 517 aa20.36■□□□□ 0.85
SCN1B-206ENST00000638536 PLA2G2AP14555 144 aa20.36■□□□□ 0.85
SCN1B-206ENST00000638536 MLLT10P55197 1068 aa20.36■□□□□ 0.85
SCN1B-206ENST00000638536 RCN2Q14257 317 aa20.36■□□□□ 0.85
SCN1B-206ENST00000638536 CLEC6AQ6EIG7 209 aa20.36■□□□□ 0.85
SCN1B-206ENST00000638536 CATSPER1Q8NEC5 780 aa20.36■□□□□ 0.85
SCN1B-206ENST00000638536 ELP5Q8TE02 316 aa20.36■□□□□ 0.85
SCN1B-206ENST00000638536 MMP25Q9NPA2 562 aa20.36■□□□□ 0.85
SCN1B-206ENST00000638536 SENP1Q9P0U3 644 aa20.36■□□□□ 0.85
SCN1B-206ENST00000638536 VPS29Q9UBQ0 182 aa20.36■□□□□ 0.85
SCN1B-206ENST00000638536 STK38LQ9Y2H1 464 aa20.36■□□□□ 0.85
SCN1B-206ENST00000638536 SVILO95425 2214 aa20.36■□□□□ 0.85
SCN1B-206ENST00000638536 PGRMC2O15173 223 aa20.35■□□□□ 0.85
SCN1B-206ENST00000638536 CASRP41180 1078 aa20.35■□□□□ 0.85
SCN1B-206ENST00000638536 STX4Q12846 297 aa20.35■□□□□ 0.85
SCN1B-206ENST00000638536 MFAP5Q13361 173 aa20.35■□□□□ 0.85
SCN1B-206ENST00000638536 EXT1Q16394 746 aa20.35■□□□□ 0.85
SCN1B-206ENST00000638536 CRB2Q5IJ48 1285 aa20.35■□□□□ 0.85
SCN1B-206ENST00000638536 CES4AQ5XG92 561 aa20.35■□□□□ 0.85
SCN1B-206ENST00000638536 H3F3CQ6NXT2 135 aa20.35■□□□□ 0.85
SCN1B-206ENST00000638536 MMP21Q8N119 569 aa20.35■□□□□ 0.85
SCN1B-206ENST00000638536 C1orf52Q8N6N3 182 aaKnown RBP20.35■□□□□ 0.85
SCN1B-206ENST00000638536 APCDD1LQ8NCL9 501 aa20.35■□□□□ 0.85
SCN1B-206ENST00000638536 CHTF18Q8WVB6 975 aa20.35■□□□□ 0.85
SCN1B-206ENST00000638536 APIPQ96GX9 242 aa20.35■□□□□ 0.85
SCN1B-206ENST00000638536 PKNOX2Q96KN3 472 aa20.35■□□□□ 0.85
SCN1B-206ENST00000638536 KCNK13Q9HB14 408 aa20.35■□□□□ 0.85
SCN1B-206ENST00000638536 LYARQ9NX58 379 aaKnown RBP20.35■□□□□ 0.85
SCN1B-206ENST00000638536 PHF11Q9UIL8 331 aa20.35■□□□□ 0.85
SCN1B-206ENST00000638536 ZNF223Q9UK11 482 aaPredicted RBP20.35■□□□□ 0.85
SCN1B-206ENST00000638536 PTGDR2Q9Y5Y4 395 aa20.35■□□□□ 0.85
SCN1B-206ENST00000638536 SPACA6W5XKT8 324 aa20.35■□□□□ 0.85
SCN1B-206ENST00000638536 MYO18BQ8IUG5 2567 aa20.35■□□□□ 0.85
SCN1B-206ENST00000638536 GPR143P51810 404 aa20.35■□□□□ 0.85
SCN1B-206ENST00000638536 RAE1P78406 368 aaKnown RBP20.35■□□□□ 0.85
SCN1B-206ENST00000638536 FOLH1Q04609 750 aa20.35■□□□□ 0.85
SCN1B-206ENST00000638536 CCNYL2Q5T2Q4 361 aa20.35■□□□□ 0.85
SCN1B-206ENST00000638536 DGAT2L6Q6ZPD8 337 aa20.35■□□□□ 0.85
SCN1B-206ENST00000638536 ZADH2Q8N4Q0 377 aa20.35■□□□□ 0.85
SCN1B-206ENST00000638536 DOK4Q8TEW6 326 aa20.35■□□□□ 0.85
SCN1B-206ENST00000638536 PTPMT1Q8WUK0 201 aaPredicted RBP20.35■□□□□ 0.85
SCN1B-206ENST00000638536 PGM2Q96G03 612 aa20.35■□□□□ 0.85
SCN1B-206ENST00000638536 MS4A12Q9NXJ0 267 aa20.35■□□□□ 0.85
SCN1B-206ENST00000638536 VTI1BQ9UEU0 232 aa20.35■□□□□ 0.85
SCN1B-206ENST00000638536 CTIFO43310 598 aaKnown RBP20.34■□□□□ 0.85
SCN1B-206ENST00000638536 SORBS2O94875 1100 aaKnown RBP20.34■□□□□ 0.85
SCN1B-206ENST00000638536 IFNA16P05015 189 aa20.34■□□□□ 0.85
SCN1B-206ENST00000638536 BPGMP07738 259 aa20.34■□□□□ 0.85
SCN1B-206ENST00000638536 TLE1Q04724 770 aa20.34■□□□□ 0.85
SCN1B-206ENST00000638536 BTKQ06187 659 aa20.34■□□□□ 0.85
SCN1B-206ENST00000638536 CSTF3Q12996 717 aaKnown RBP20.34■□□□□ 0.85
SCN1B-206ENST00000638536 PRR30Q53SZ7 412 aaPredicted RBP20.34■□□□□ 0.85
SCN1B-206ENST00000638536 Q6ZS92 163 aa20.34■□□□□ 0.85
SCN1B-206ENST00000638536 CUZD1Q86UP6 607 aa20.34■□□□□ 0.85
SCN1B-206ENST00000638536 CRLF3Q8IUI8 442 aa20.34■□□□□ 0.85
SCN1B-206ENST00000638536 ZNF321PQ8N8H1 164 aa20.34■□□□□ 0.85
SCN1B-206ENST00000638536 PPWD1Q96BP3 646 aaKnown RBP20.34■□□□□ 0.85
SCN1B-206ENST00000638536 LMF1Q96S06 567 aa20.34■□□□□ 0.85
SCN1B-206ENST00000638536 AHSPQ9NZD4 102 aa20.34■□□□□ 0.85
SCN1B-206ENST00000638536 ADAM29Q9UKF5 820 aa20.34■□□□□ 0.85
SCN1B-206ENST00000638536 KLHL41O60662 606 aa20.33■□□□□ 0.84
SCN1B-206ENST00000638536 HSD3B1P14060 373 aa20.33■□□□□ 0.84
SCN1B-206ENST00000638536 HSD3B2P26439 372 aa20.33■□□□□ 0.84
SCN1B-206ENST00000638536 NAA20P61599 178 aa20.33■□□□□ 0.84
SCN1B-206ENST00000638536 IGLV3-21P80748 117 aaPredicted RBP20.33■□□□□ 0.84
SCN1B-206ENST00000638536 ZNF33BQ06732 778 aa20.33■□□□□ 0.84
SCN1B-206ENST00000638536 CASP8Q14790 479 aa20.33■□□□□ 0.84
SCN1B-206ENST00000638536 B3GNT7Q8NFL0 401 aa20.33■□□□□ 0.84
SCN1B-206ENST00000638536 OR6Y1Q8NGX8 325 aa20.33■□□□□ 0.84
SCN1B-206ENST00000638536 DNAJB14Q8TBM8 379 aa20.33■□□□□ 0.84
SCN1B-206ENST00000638536 SREK1Q8WXA9 508 aaKnown RBP20.33■□□□□ 0.84
SCN1B-206ENST00000638536 PNPLA2Q96AD5 504 aa20.33■□□□□ 0.84
SCN1B-206ENST00000638536 TM4SF18Q96CE8 201 aa20.33■□□□□ 0.84
SCN1B-206ENST00000638536 CNDP1Q96KN2 507 aa20.33■□□□□ 0.84
SCN1B-206ENST00000638536 EPS8L2Q9H6S3 715 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms