RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 RECKO95980 971 aa13.46□□□□□ -0.25
LDB3-209ENST00000623056 HNF1BP35680 557 aa13.46□□□□□ -0.25
LDB3-209ENST00000623056 ATP5C1P36542 298 aaKnown RBP13.46□□□□□ -0.25
LDB3-209ENST00000623056 SPAM1P38567 509 aa13.46□□□□□ -0.25
LDB3-209ENST00000623056 MAPK12P53778 367 aa13.46□□□□□ -0.25
LDB3-209ENST00000623056 PFN3P60673 137 aa13.46□□□□□ -0.25
LDB3-209ENST00000623056 EEF1A2Q05639 463 aaKnown RBP13.46□□□□□ -0.25
LDB3-209ENST00000623056 P2RY14Q15391 338 aa13.46□□□□□ -0.25
LDB3-209ENST00000623056 CDKN3Q16667 212 aa13.46□□□□□ -0.25
LDB3-209ENST00000623056 CRB2Q5IJ48 1285 aa13.46□□□□□ -0.25
LDB3-209ENST00000623056 CCNJQ5T5M9 372 aa13.46□□□□□ -0.25
LDB3-209ENST00000623056 C12orf73Q69YU5 71 aa13.46□□□□□ -0.25
LDB3-209ENST00000623056 CNIH2Q6PI25 160 aa13.46□□□□□ -0.25
LDB3-209ENST00000623056 ZNF730Q6ZMV8 503 aa13.46□□□□□ -0.25
LDB3-209ENST00000623056 CHST9Q7L1S5 443 aa13.46□□□□□ -0.25
LDB3-209ENST00000623056 VRK3Q8IV63 474 aa13.46□□□□□ -0.25
LDB3-209ENST00000623056 SYT14Q8NB59 555 aa13.46□□□□□ -0.25
LDB3-209ENST00000623056 OR4K1Q8NGD4 311 aa13.46□□□□□ -0.25
LDB3-209ENST00000623056 OR52N2Q8NGI0 321 aa13.46□□□□□ -0.25
LDB3-209ENST00000623056 AP3S1Q92572 193 aa13.46□□□□□ -0.25
LDB3-209ENST00000623056 MAGEB10Q96LZ2 347 aaPredicted RBP13.46□□□□□ -0.25
LDB3-209ENST00000623056 MED18Q9BUE0 208 aa13.46□□□□□ -0.25
LDB3-209ENST00000623056 PAK6Q9NQU5 681 aaPredicted RBP13.46□□□□□ -0.25
LDB3-209ENST00000623056 GLTPQ9NZD2 209 aa13.46□□□□□ -0.25
LDB3-209ENST00000623056 COMMD3Q9UBI1 195 aa13.46□□□□□ -0.25
LDB3-209ENST00000623056 EIF3KQ9UBQ5 218 aaKnown RBP13.46□□□□□ -0.25
LDB3-209ENST00000623056 NDOR1Q9UHB4 597 aa13.46□□□□□ -0.25
LDB3-209ENST00000623056 HTTP42858 3142 aa13.46□□□□□ -0.25
LDB3-209ENST00000623056 MGAT4DA6NG13 374 aa13.46□□□□□ -0.26
LDB3-209ENST00000623056 PITPNM1O00562 1244 aa13.46□□□□□ -0.26
LDB3-209ENST00000623056 FFAR1O14842 300 aa13.46□□□□□ -0.26
LDB3-209ENST00000623056 ORC5O43913 435 aa13.46□□□□□ -0.26
LDB3-209ENST00000623056 SLC43A1O75387 559 aa13.46□□□□□ -0.26
LDB3-209ENST00000623056 ADAP00813 363 aa13.46□□□□□ -0.26
LDB3-209ENST00000623056 OR1G1P47890 313 aa13.46□□□□□ -0.26
LDB3-209ENST00000623056 STK19P49842 368 aaPredicted RBP13.46□□□□□ -0.26
LDB3-209ENST00000623056 CAV3P56539 151 aa13.46□□□□□ -0.26
LDB3-209ENST00000623056 PPP3R1P63098 170 aa13.46□□□□□ -0.26
LDB3-209ENST00000623056 ABATP80404 500 aa13.46□□□□□ -0.26
LDB3-209ENST00000623056 B4GALNT1Q00973 533 aa13.46□□□□□ -0.26
LDB3-209ENST00000623056 MRPL28Q13084 256 aaKnown RBP13.46□□□□□ -0.26
LDB3-209ENST00000623056 LIPJQ5W064 366 aa13.46□□□□□ -0.26
LDB3-209ENST00000623056 ADNP2Q6IQ32 1131 aa13.46□□□□□ -0.26
LDB3-209ENST00000623056 CEACAM20Q6UY09 585 aa13.46□□□□□ -0.26
LDB3-209ENST00000623056 SLC51BQ86UW2 128 aa13.46□□□□□ -0.26
LDB3-209ENST00000623056 TMEM145Q8NBT3 493 aa13.46□□□□□ -0.26
LDB3-209ENST00000623056 OR8H1Q8NGG4 311 aa13.46□□□□□ -0.26
LDB3-209ENST00000623056 OR52P1PQ8NH57 321 aa13.46□□□□□ -0.26
LDB3-209ENST00000623056 DNAJA4Q8WW22 397 aaPredicted RBP13.46□□□□□ -0.26
LDB3-209ENST00000623056 DCLRE1CQ96SD1 692 aaKnown RBP13.46□□□□□ -0.26
LDB3-209ENST00000623056 SOSTQ9BQB4 213 aa13.46□□□□□ -0.26
LDB3-209ENST00000623056 MARVELD1Q9BSK0 173 aa13.46□□□□□ -0.26
LDB3-209ENST00000623056 TMEM38AQ9H6F2 299 aa13.46□□□□□ -0.26
LDB3-209ENST00000623056 C1GALT1Q9NS00 363 aa13.46□□□□□ -0.26
LDB3-209ENST00000623056 RAB23Q9ULC3 237 aa13.46□□□□□ -0.26
LDB3-209ENST00000623056 EXO1Q9UQ84 846 aaKnown RBP13.46□□□□□ -0.26
LDB3-209ENST00000623056 PCDHGB7Q9Y5F8 929 aa13.46□□□□□ -0.26
LDB3-209ENST00000623056 SPIN1Q9Y657 262 aaPredicted RBP13.46□□□□□ -0.26
LDB3-209ENST00000623056 ZNF106Q9H2Y7 1883 aaKnown RBP13.45□□□□□ -0.26
LDB3-209ENST00000623056 LOC102723532A0A0G2JNH3 316 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 HEPACAM2A8MVW5 462 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 E7EQ34 232 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 LRRTM2O43300 516 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 SCO1O75880 301 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 C6orf47O95873 294 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 IFNA14P01570 189 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 IFNW1P05000 195 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 IRS1P35568 1242 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 ETV5P41161 510 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 GSTM5P46439 218 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 ETV1P50549 477 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 RPS25P62851 125 aaKnown RBP13.45□□□□□ -0.26
LDB3-209ENST00000623056 ILKQ13418 452 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 ATAT1Q5SQI0 421 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 ZBTB37Q5TC79 503 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 MFSD14CQ5VZR4 134 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 FAM205BPQ63HN1 556 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 CASP12Q6UXS9 341 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 SERINC5Q86VE9 423 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 GRAMD2AQ8IUY3 354 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 FBXL6Q8N531 539 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 TCEANCQ8N8B7 351 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 GPR156Q8NFN8 814 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 CCDC120Q96HB5 630 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 HYLS1Q96M11 299 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 PKP4Q99569 1192 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 TMEM121BQ9BXQ6 578 aaPredicted RBP13.45□□□□□ -0.26
LDB3-209ENST00000623056 C12orf10Q9HB07 376 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 KLHL42Q9P2K6 505 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 KCND3Q9UK17 655 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 NUP50Q9UKX7 468 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 MAP4K5Q9Y4K4 846 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 GNG14A0A1W2PPG7 69 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 OR5K3A6NET4 321 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 H3BN98 237 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 K7ERQ8 282 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 PLOD3O60568 738 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 CORO1AP31146 461 aaKnown RBP13.45□□□□□ -0.26
LDB3-209ENST00000623056 THPOP40225 353 aa13.45□□□□□ -0.26
LDB3-209ENST00000623056 LIM2P55344 173 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms