RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 OR4C6Q8NH72 309 aa8.65□□□□□ -1.02
HDAC9-229ENST00000622668 THOC3Q96J01 351 aaKnown RBP8.65□□□□□ -1.02
HDAC9-229ENST00000622668 SORBS1Q9BX66 1292 aaKnown RBP8.65□□□□□ -1.02
HDAC9-229ENST00000622668 ZNF717Q9BY31 904 aaPredicted RBP8.65□□□□□ -1.02
HDAC9-229ENST00000622668 CHST8Q9H2A9 424 aa8.65□□□□□ -1.02
HDAC9-229ENST00000622668 ZNF71Q9NQZ8 489 aaPredicted RBP8.65□□□□□ -1.02
HDAC9-229ENST00000622668 ZDHHC2Q9UIJ5 367 aa8.65□□□□□ -1.02
HDAC9-229ENST00000622668 OR51B4Q9Y5P0 310 aa8.65□□□□□ -1.02
HDAC9-229ENST00000622668 SASH3O75995 380 aa8.65□□□□□ -1.03
HDAC9-229ENST00000622668 TGDSO95455 350 aa8.65□□□□□ -1.03
HDAC9-229ENST00000622668 FTH1P19P0C7X4 201 aa8.65□□□□□ -1.03
HDAC9-229ENST00000622668 PCSK2P16519 638 aa8.65□□□□□ -1.03
HDAC9-229ENST00000622668 MATN1P21941 496 aa8.65□□□□□ -1.03
HDAC9-229ENST00000622668 TAZQ16635 292 aa8.65□□□□□ -1.03
HDAC9-229ENST00000622668 CCSMST1Q4G0I0 132 aa8.65□□□□□ -1.03
HDAC9-229ENST00000622668 EIPR1Q53HC9 387 aa8.65□□□□□ -1.03
HDAC9-229ENST00000622668 WLSQ5T9L3 541 aa8.65□□□□□ -1.03
HDAC9-229ENST00000622668 TMEM225Q6GV28 225 aa8.65□□□□□ -1.03
HDAC9-229ENST00000622668 TYW3Q6IPR3 259 aaKnown RBP8.65□□□□□ -1.03
HDAC9-229ENST00000622668 NEK10Q6ZWH5 1172 aa8.65□□□□□ -1.03
HDAC9-229ENST00000622668 SYVN1Q86TM6 617 aa8.65□□□□□ -1.03
HDAC9-229ENST00000622668 LNX2Q8N448 690 aa8.65□□□□□ -1.03
HDAC9-229ENST00000622668 ZNF740Q8NDX6 193 aa8.65□□□□□ -1.03
HDAC9-229ENST00000622668 CATSPER1Q8NEC5 780 aa8.65□□□□□ -1.03
HDAC9-229ENST00000622668 SLC38A4Q969I6 547 aa8.65□□□□□ -1.03
HDAC9-229ENST00000622668 TAAR9Q96RI9 348 aa8.65□□□□□ -1.03
HDAC9-229ENST00000622668 RRP15Q9Y3B9 282 aaKnown RBP8.65□□□□□ -1.03
HDAC9-229ENST00000622668 PRORSD1PA6NEY8 169 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 MEN1O00255 615 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 OPN1SWP03999 348 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 RPSAP08865 295 aaKnown RBP8.64□□□□□ -1.03
HDAC9-229ENST00000622668 GDF1P27539 372 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 UGT2B15P54855 530 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 MRPS35P82673 323 aaKnown RBP8.64□□□□□ -1.03
HDAC9-229ENST00000622668 CHAF1BQ13112 559 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 ZNF311Q5JNZ3 666 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 CTSL3PQ5NE16 218 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 DEPDC1Q5TB30 811 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 ERICH5Q6P6B1 374 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 HMGN2P46Q86SG4 172 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 TMEM234Q8WY98 164 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 PPP1R14AQ96A00 147 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 ZNF419Q96HQ0 510 aaPredicted RBP8.64□□□□□ -1.03
HDAC9-229ENST00000622668 LYSMD1Q96S90 227 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 CCDC28BQ9BUN5 200 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 RNF121Q9H920 327 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 USE1Q9NZ43 259 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 BLOC1S6Q9UL45 172 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 TRIP11Q15643 1979 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 IGHV3-20A0A0C4DH32 117 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 ELOVL7A1L3X0 281 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 ITM2AO43736 263 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 AKAP8O43823 692 aaKnown RBP8.64□□□□□ -1.03
HDAC9-229ENST00000622668 FCGR1AP12314 374 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 IMPA1P29218 277 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 IL5RAQ01344 420 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 CD47Q08722 323 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 RSPO4Q2I0M5 234 aaPredicted RBP8.64□□□□□ -1.03
HDAC9-229ENST00000622668 BCL7AQ4VC05 210 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 DENND5AQ6IQ26 1287 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 OPN5Q6U736 354 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 ENPP6Q6UWR7 440 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 ZNF551Q7Z340 670 aaPredicted RBP8.64□□□□□ -1.03
HDAC9-229ENST00000622668 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.64□□□□□ -1.03
HDAC9-229ENST00000622668 ALG14Q96F25 216 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 COL25A1Q9BXS0 654 aaPredicted RBP8.64□□□□□ -1.03
HDAC9-229ENST00000622668 TMEM185BQ9H7F4 350 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 SPHK1Q9NYA1 384 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 PRAMEF33A0A0G2JMD5 474 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 FAM234BA2RU67 622 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 BHMG1C9JSJ3 638 aaPredicted RBP8.64□□□□□ -1.03
HDAC9-229ENST00000622668 SERPINA6P08185 405 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 CELA2BP08218 269 aaPredicted RBP8.64□□□□□ -1.03
HDAC9-229ENST00000622668 HSD3B1P14060 373 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 HSD3B2P26439 372 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 GPR3P46089 330 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 SFT2D3Q587I9 215 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 PRAMEF20Q5VT98 475 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 FRMD7Q6ZUT3 714 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.64□□□□□ -1.03
HDAC9-229ENST00000622668 GHDCQ8N2G8 530 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 VWA5B2Q8N398 1253 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 RASSF5Q8WWW0 418 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 FATE1Q969F0 183 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 NMUR2Q9GZQ4 415 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 TIGARQ9NQ88 270 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 CSNK1G3Q9Y6M4 447 aa8.64□□□□□ -1.03
HDAC9-229ENST00000622668 ZNF318Q5VUA4 2279 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 MROH6A6NGR9 719 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 M0R3G1 203 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 HYAL3O43820 417 aaPredicted RBP8.63□□□□□ -1.03
HDAC9-229ENST00000622668 PGRP06401 933 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 PEPDP12955 493 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 PTNP21246 168 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 SH3BP2P78314 561 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 DNASE1L3Q13609 305 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 STEAP4Q687X5 459 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 FCRLBQ6BAA4 426 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 FAM180AQ6UWF9 173 aa8.63□□□□□ -1.03
HDAC9-229ENST00000622668 FAM83HQ6ZRV2 1179 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms