RNA–Protein interactions for RNA: ENST00000622433.4

MECP2-213, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 1,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-213ENST00000622433 ZNF781Q8N8C0 355 aa12.67□□□□□ -0.38
MECP2-213ENST00000622433 CLEC1AQ8NC01 280 aa12.67□□□□□ -0.38
MECP2-213ENST00000622433 UBL7Q96S82 380 aaPredicted RBP12.67□□□□□ -0.38
MECP2-213ENST00000622433 WDR77Q9BQA1 342 aaPredicted RBP12.67□□□□□ -0.38
MECP2-213ENST00000622433 TRIM55Q9BYV6 548 aa12.67□□□□□ -0.38
MECP2-213ENST00000622433 RPF2Q9H7B2 306 aaKnown RBP12.67□□□□□ -0.38
MECP2-213ENST00000622433 MANSC1Q9H8J5 431 aa12.67□□□□□ -0.38
MECP2-213ENST00000622433 PFDN4Q9NQP4 134 aa12.67□□□□□ -0.38
MECP2-213ENST00000622433 THAP1Q9NVV9 213 aa12.67□□□□□ -0.38
MECP2-213ENST00000622433 C1orf109Q9NX04 203 aa12.67□□□□□ -0.38
MECP2-213ENST00000622433 TUBD1Q9UJT1 453 aa12.67□□□□□ -0.38
MECP2-213ENST00000622433 CACNA1BQ00975 2339 aa12.66□□□□□ -0.38
MECP2-213ENST00000622433 NSG1A0A0A6YYJ2 146 aa12.66□□□□□ -0.38
MECP2-213ENST00000622433 TGFBR3LH3BV60 316 aa12.66□□□□□ -0.38
MECP2-213ENST00000622433 PIP5K1BO14986 540 aa12.66□□□□□ -0.38
MECP2-213ENST00000622433 PCDH7O60245 1069 aa12.66□□□□□ -0.38
MECP2-213ENST00000622433 RPL14P50914 215 aaKnown RBP12.66□□□□□ -0.38
MECP2-213ENST00000622433 CHAF1BQ13112 559 aa12.66□□□□□ -0.38
MECP2-213ENST00000622433 SERTAD2Q14140 314 aa12.66□□□□□ -0.38
MECP2-213ENST00000622433 KIAA0040Q15053 153 aa12.66□□□□□ -0.38
MECP2-213ENST00000622433 TERF2Q15554 542 aa12.66□□□□□ -0.38
MECP2-213ENST00000622433 C18orf63Q68DL7 685 aa12.66□□□□□ -0.38
MECP2-213ENST00000622433 OR52E8Q6IFG1 317 aa12.66□□□□□ -0.38
MECP2-213ENST00000622433 DDIASQ8IXT1 998 aa12.66□□□□□ -0.38
MECP2-213ENST00000622433 LSM14AQ8ND56 463 aaKnown RBP12.66□□□□□ -0.38
MECP2-213ENST00000622433 OR2T11Q8NH01 316 aa12.66□□□□□ -0.38
MECP2-213ENST00000622433 AGR3Q8TD06 166 aa12.66□□□□□ -0.38
MECP2-213ENST00000622433 ANKRD9Q96BM1 317 aaPredicted RBP12.66□□□□□ -0.38
MECP2-213ENST00000622433 TM4SF18Q96CE8 201 aa12.66□□□□□ -0.38
MECP2-213ENST00000622433 FCRL1Q96LA6 429 aa12.66□□□□□ -0.38
MECP2-213ENST00000622433 IMMP1LQ96LU5 166 aa12.66□□□□□ -0.38
MECP2-213ENST00000622433 LPAR4Q99677 370 aa12.66□□□□□ -0.38
MECP2-213ENST00000622433 ARHGAP9Q9BRR9 750 aa12.66□□□□□ -0.38
MECP2-213ENST00000622433 LRTM1Q9HBL6 345 aa12.66□□□□□ -0.38
MECP2-213ENST00000622433 ZNF160Q9HCG1 818 aa12.66□□□□□ -0.38
MECP2-213ENST00000622433 TEX10Q9NXF1 929 aaPredicted RBP12.66□□□□□ -0.38
MECP2-213ENST00000622433 WBP11Q9Y2W2 641 aaKnown RBP12.66□□□□□ -0.38
MECP2-213ENST00000622433 PCDHA9Q9Y5H5 950 aa12.66□□□□□ -0.38
MECP2-213ENST00000622433 PTGDR2Q9Y5Y4 395 aa12.66□□□□□ -0.38
MECP2-213ENST00000622433 ITPR1Q14643 2758 aa12.66□□□□□ -0.38
MECP2-213ENST00000622433 C1orf226A1L170 272 aa12.65□□□□□ -0.38
MECP2-213ENST00000622433 LSM1O15116 133 aaKnown RBP12.65□□□□□ -0.38
MECP2-213ENST00000622433 KLHL41O60662 606 aa12.65□□□□□ -0.38
MECP2-213ENST00000622433 MYO1DO94832 1006 aa12.65□□□□□ -0.38
MECP2-213ENST00000622433 SEC24DO94855 1032 aaPredicted RBP12.65□□□□□ -0.38
MECP2-213ENST00000622433 LINC00032P0C843 101 aa12.65□□□□□ -0.38
MECP2-213ENST00000622433 ICAM2P13598 275 aa12.65□□□□□ -0.38
MECP2-213ENST00000622433 NR1D1P20393 614 aa12.65□□□□□ -0.38
MECP2-213ENST00000622433 AP2B1P63010 937 aa12.65□□□□□ -0.38
MECP2-213ENST00000622433 OCRLQ01968 901 aa12.65□□□□□ -0.38
MECP2-213ENST00000622433 BTKQ06187 659 aa12.65□□□□□ -0.38
MECP2-213ENST00000622433 ACTN3Q08043 901 aaPredicted RBP12.65□□□□□ -0.38
MECP2-213ENST00000622433 STX4Q12846 297 aa12.65□□□□□ -0.38
MECP2-213ENST00000622433 NR6A1Q15406 480 aa12.65□□□□□ -0.38
MECP2-213ENST00000622433 EXT1Q16394 746 aa12.65□□□□□ -0.38
MECP2-213ENST00000622433 NDUFAF5Q5TEU4 345 aa12.65□□□□□ -0.38
MECP2-213ENST00000622433 PLAG1Q6DJT9 500 aa12.65□□□□□ -0.38
MECP2-213ENST00000622433 PAPD4Q6PIY7 484 aaKnown RBP12.65□□□□□ -0.38
MECP2-213ENST00000622433 PCSK4Q6UW60 755 aa12.65□□□□□ -0.38
MECP2-213ENST00000622433 RIPOR1Q6ZS17 1223 aa12.65□□□□□ -0.38
MECP2-213ENST00000622433 CLNKQ7Z7G1 428 aa12.65□□□□□ -0.38
MECP2-213ENST00000622433 GALNT16Q8N428 558 aa12.65□□□□□ -0.38
MECP2-213ENST00000622433 ZNF75CPQ92670 426 aaPredicted RBP12.65□□□□□ -0.38
MECP2-213ENST00000622433 FAIM2Q9BWQ8 316 aa12.65□□□□□ -0.38
MECP2-213ENST00000622433 ALOXE3Q9BYJ1 711 aa12.65□□□□□ -0.38
MECP2-213ENST00000622433 ADAP2Q9NPF8 381 aa12.65□□□□□ -0.38
MECP2-213ENST00000622433 MED4Q9NPJ6 270 aa12.65□□□□□ -0.38
MECP2-213ENST00000622433 INTS9Q9NV88 658 aaKnown RBP12.65□□□□□ -0.38
MECP2-213ENST00000622433 TMED5Q9Y3A6 229 aa12.65□□□□□ -0.38
MECP2-213ENST00000622433 PCDHGA9Q9Y5G4 932 aaKnown RBP12.65□□□□□ -0.38
MECP2-213ENST00000622433 CFAP47Q6ZTR5 3102 aa12.64□□□□□ -0.39
MECP2-213ENST00000622433 IGHV3-20A0A0C4DH32 117 aa12.64□□□□□ -0.39
MECP2-213ENST00000622433 GNG14A0A1W2PPG7 69 aa12.64□□□□□ -0.39
MECP2-213ENST00000622433 SAGE2PA6NJ88 616 aa12.64□□□□□ -0.39
MECP2-213ENST00000622433 MKRN2OSH3BPM6 223 aa12.64□□□□□ -0.39
MECP2-213ENST00000622433 ATXN7O15265 892 aaPredicted RBP12.64□□□□□ -0.39
MECP2-213ENST00000622433 FGF17O60258 216 aa12.64□□□□□ -0.39
MECP2-213ENST00000622433 LDB3O75112 727 aa12.64□□□□□ -0.39
MECP2-213ENST00000622433 SEC22BO75396 215 aa12.64□□□□□ -0.39
MECP2-213ENST00000622433 SKAP2O75563 359 aaPredicted RBP12.64□□□□□ -0.39
MECP2-213ENST00000622433 PRKRAO75569 313 aaKnown RBP12.64□□□□□ -0.39
MECP2-213ENST00000622433 DNAJB5O75953 348 aa12.64□□□□□ -0.39
MECP2-213ENST00000622433 GPR75O95800 540 aa12.64□□□□□ -0.39
MECP2-213ENST00000622433 SERPINA7P05543 415 aa12.64□□□□□ -0.39
MECP2-213ENST00000622433 ANXA4P09525 319 aaPredicted RBP12.64□□□□□ -0.39
MECP2-213ENST00000622433 SFTPCP11686 197 aa12.64□□□□□ -0.39
MECP2-213ENST00000622433 DRD2P14416 443 aa12.64□□□□□ -0.39
MECP2-213ENST00000622433 CCL11P51671 97 aa12.64□□□□□ -0.39
MECP2-213ENST00000622433 ZNF763Q0D2J5 394 aa12.64□□□□□ -0.39
MECP2-213ENST00000622433 Q0VFX4 171 aa12.64□□□□□ -0.39
MECP2-213ENST00000622433 KCNAB2Q13303 367 aa12.64□□□□□ -0.39
MECP2-213ENST00000622433 MYBPC3Q14896 1274 aa12.64□□□□□ -0.39
MECP2-213ENST00000622433 ELAVL1Q15717 326 aaKnown RBP12.64□□□□□ -0.39
MECP2-213ENST00000622433 HSP90B2PQ58FF3 399 aa12.64□□□□□ -0.39
MECP2-213ENST00000622433 NOXRED1Q6NXP6 359 aa12.64□□□□□ -0.39
MECP2-213ENST00000622433 JMJD6Q6NYC1 403 aaPredicted RBP12.64□□□□□ -0.39
MECP2-213ENST00000622433 KBTBD2Q8IY47 623 aa12.64□□□□□ -0.39
MECP2-213ENST00000622433 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.64□□□□□ -0.392e-6■■□□□ 13.5
MECP2-213ENST00000622433 DNAJB14Q8TBM8 379 aa12.64□□□□□ -0.39
MECP2-213ENST00000622433 M1APQ8TC57 530 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms