RNA–Protein interactions for RNA: ENST00000619079.1

UPF3A-212, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-212ENST00000619079 ELAC1Q9H777 363 aaKnown RBP10.34□□□□□ -0.75
UPF3A-212ENST00000619079 HEXA-AS1Q9H8Q6 139 aa10.34□□□□□ -0.75
UPF3A-212ENST00000619079 TPT1P8Q9HAU6 139 aa10.34□□□□□ -0.75
UPF3A-212ENST00000619079 EVA1BQ9NVM1 165 aa10.34□□□□□ -0.75
UPF3A-212ENST00000619079 LYARQ9NX58 379 aaKnown RBP10.34□□□□□ -0.75
UPF3A-212ENST00000619079 ELOVL2Q9NXB9 296 aa10.34□□□□□ -0.75
UPF3A-212ENST00000619079 IGLV3-10A0A075B6K4 115 aa10.34□□□□□ -0.75
UPF3A-212ENST00000619079 GRXCR1A8MXD5 290 aa10.34□□□□□ -0.75
UPF3A-212ENST00000619079 TLR5O60602 858 aa10.34□□□□□ -0.75
UPF3A-212ENST00000619079 PRAMEF11O60813 436 aa10.34□□□□□ -0.75
UPF3A-212ENST00000619079 ENTPD6O75354 484 aa10.34□□□□□ -0.75
UPF3A-212ENST00000619079 WDPCPO95876 746 aa10.34□□□□□ -0.75
UPF3A-212ENST00000619079 B3GALT4O96024 378 aa10.34□□□□□ -0.75
UPF3A-212ENST00000619079 HBQ1P09105 142 aa10.34□□□□□ -0.75
UPF3A-212ENST00000619079 OR56A5P0C7T3 313 aa10.34□□□□□ -0.75
UPF3A-212ENST00000619079 CNR2P34972 360 aa10.34□□□□□ -0.75
UPF3A-212ENST00000619079 GATMP50440 423 aa10.34□□□□□ -0.75
UPF3A-212ENST00000619079 CRYBA2P53672 197 aa10.34□□□□□ -0.75
UPF3A-212ENST00000619079 DSTNP60981 165 aa10.34□□□□□ -0.75
UPF3A-212ENST00000619079 FAM189BP81408 668 aa10.34□□□□□ -0.75
UPF3A-212ENST00000619079 IL18Q14116 193 aa10.34□□□□□ -0.75
UPF3A-212ENST00000619079 DOC2BQ14184 412 aa10.34□□□□□ -0.75
UPF3A-212ENST00000619079 DGKKQ5KSL6 1271 aa10.34□□□□□ -0.75
UPF3A-212ENST00000619079 SPOUT1Q5T280 376 aaKnown RBP10.34□□□□□ -0.75
UPF3A-212ENST00000619079 C22orf42Q6IC83 251 aa10.34□□□□□ -0.75
UPF3A-212ENST00000619079 FRMPD2BQ6IN97 320 aa10.34□□□□□ -0.75
UPF3A-212ENST00000619079 MZT2AQ6P582 158 aa10.34□□□□□ -0.75
UPF3A-212ENST00000619079 TSEN54Q7Z6J9 526 aaKnown RBP10.34□□□□□ -0.75
UPF3A-212ENST00000619079 GLCCI1Q86VQ1 547 aa10.34□□□□□ -0.75
UPF3A-212ENST00000619079 DTX3Q8N9I9 347 aa10.34□□□□□ -0.75
UPF3A-212ENST00000619079 OR8J2Q8NGG1 315 aa10.34□□□□□ -0.75
UPF3A-212ENST00000619079 OR52J3Q8NH60 311 aa10.34□□□□□ -0.75
UPF3A-212ENST00000619079 PHOSPHO2Q8TCD6 241 aa10.34□□□□□ -0.75
UPF3A-212ENST00000619079 UCN3Q969E3 161 aa10.34□□□□□ -0.75
UPF3A-212ENST00000619079 ZFP42Q96MM3 310 aa10.34□□□□□ -0.75
UPF3A-212ENST00000619079 P2RY12Q9H244 342 aa10.34□□□□□ -0.75
UPF3A-212ENST00000619079 ZFP64Q9NPA5 681 aa10.34□□□□□ -0.75
UPF3A-212ENST00000619079 FZD4Q9ULV1 537 aa10.34□□□□□ -0.75
UPF3A-212ENST00000619079 COLQQ9Y215 455 aaPredicted RBP10.34□□□□□ -0.75
UPF3A-212ENST00000619079 SESN1Q9Y6P5 492 aa10.34□□□□□ -0.75
UPF3A-212ENST00000619079 CDH23Q9H251 3354 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 ISM1B1AKI9 464 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 TLR4O00206 839 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 STK25O00506 426 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 SLC30A4O14863 429 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 PPM1BO75688 479 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 LRATO95237 230 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 POMCP01189 267 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 PDYNP01213 254 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 DGKAP23743 735 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 TACR1P25103 407 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 HMGA2P52926 109 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 DBPQ10586 325 aaPredicted RBP10.33□□□□□ -0.76
UPF3A-212ENST00000619079 EXOSC2Q13868 293 aaKnown RBP10.33□□□□□ -0.76
UPF3A-212ENST00000619079 BOP1Q14137 746 aaKnown RBP10.33□□□□□ -0.76
UPF3A-212ENST00000619079 GGTA1PQ4G0N0 100 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 FLYWCH1Q4VC44 716 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 HSD17B12Q53GQ0 312 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 FAM109BQ6ICB4 259 aaPredicted RBP10.33□□□□□ -0.76
UPF3A-212ENST00000619079 TMEM81Q6P7N7 255 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 ADGRD2Q7Z7M1 963 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 PDZD3Q86UT5 571 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 LAS2Q8IYD9 372 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 OR9Q2Q8NGE9 314 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 SCAMP5Q8TAC9 235 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.33□□□□□ -0.76
UPF3A-212ENST00000619079 HGDQ93099 445 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 PIP5K1AQ99755 562 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 RTP3Q9BQQ7 232 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 ACBD6Q9BR61 282 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 KATNB1Q9BVA0 655 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 APOL5Q9BWW9 433 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 CHST8Q9H2A9 424 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 CLEC2DQ9UHP7 191 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 FKBPLQ9UIM3 349 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 MAB21L2Q9Y586 359 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 TIMM13Q9Y5L4 95 aaPredicted RBP10.33□□□□□ -0.76
UPF3A-212ENST00000619079 PRAMEF33A0A0G2JMD5 474 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 LOC102723532A0A0G2JNH3 316 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 A0A1B0GVI7 797 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 C7orf66A4D0T2 115 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 ARL5CA6NH57 179 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 H7C0S8 307 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 PTGESO14684 152 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 KHNYNO15037 678 aaKnown RBP10.33□□□□□ -0.76
UPF3A-212ENST00000619079 PRAMEF10O60809 474 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 GJB3O75712 270 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 STK16O75716 305 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 CLEC2LP0C7M8 214 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 SLC6A1P30531 599 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 GDF5P43026 501 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 EVX1P49640 407 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 CLCNKAP51800 687 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 RPA4Q13156 261 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 ADAM15Q13444 863 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 FGFBP1Q14512 234 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 FCN2Q15485 313 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 SNAPC1Q16533 368 aa10.33□□□□□ -0.76
UPF3A-212ENST00000619079 CPSF6Q16630 551 aaKnown RBP eCLIP10.33□□□□□ -0.76
UPF3A-212ENST00000619079 PLK5Q496M5 336 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms