RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 DNASE1L2Q92874 299 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 C12orf43Q96C57 262 aaKnown RBP14.92□□□□□ -0.02
NR1H3-235ENST00000616973 KCNC2Q96PR1 638 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 PSD2Q9BQI7 771 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 TWSG1Q9GZX9 223 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 KLHL31Q9H511 634 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 FANCEQ9HB96 536 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 TIMMDC1Q9NPL8 285 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 EBF1Q9UH73 591 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 KLF15Q9UIH9 416 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 TRIM64BA6NI03 449 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 MAN2B1O00754 1011 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 ANGPTL1O95841 491 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 CHRM5P08912 532 aaPredicted RBP14.92□□□□□ -0.02
NR1H3-235ENST00000616973 NDUFV2P19404 249 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 HIST1H1TP22492 207 aaPredicted RBP14.92□□□□□ -0.02
NR1H3-235ENST00000616973 HTR1BP28222 390 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 ACSL1P33121 698 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 XCR1P46094 333 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 HMGA2P52926 109 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 NUP107P57740 925 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 YPEL5P62699 121 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 IL1RL1Q01638 556 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 HSPB3Q12988 150 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 KIAA1324Q6UXG2 1013 aaKnown RBP14.92□□□□□ -0.02
NR1H3-235ENST00000616973 TMEM92Q6UXU6 159 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 ZNF605Q86T29 641 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 FAM20CQ8IXL6 584 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 TMEM145Q8NBT3 493 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 SLC38A5Q8WUX1 472 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 SLC35C2Q9NQQ7 365 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 C5AR2Q9P296 337 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 RAB23Q9ULC3 237 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 CDC14AQ9UNH5 594 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 TESMINQ9Y4I5 508 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 ASB4Q9Y574 426 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 PCDHGB1Q9Y5G3 927 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 PCDHGA2Q9Y5H1 932 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 ENPP4Q9Y6X5 453 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 F5P12259 2224 aa14.91□□□□□ -0.02
NR1H3-235ENST00000616973 A0A0G2JN53 185 aa14.91□□□□□ -0.02
NR1H3-235ENST00000616973 LRRC72A6NJI9 287 aa14.91□□□□□ -0.02
NR1H3-235ENST00000616973 C10orf142B7Z368 130 aa14.91□□□□□ -0.02
NR1H3-235ENST00000616973 C5orf58C9J3I9 102 aa14.91□□□□□ -0.02
NR1H3-235ENST00000616973 PPM1DO15297 605 aa14.91□□□□□ -0.02
NR1H3-235ENST00000616973 PRAMEF10O60809 474 aa14.91□□□□□ -0.02
NR1H3-235ENST00000616973 B4GALT2O60909 372 aa14.91□□□□□ -0.02
NR1H3-235ENST00000616973 PDE9AO76083 593 aa14.91□□□□□ -0.02
NR1H3-235ENST00000616973 TFPTP0C1Z6 253 aa14.91□□□□□ -0.02
NR1H3-235ENST00000616973 TNFRSF1BP20333 461 aa14.91□□□□□ -0.02
NR1H3-235ENST00000616973 ATP5A1P25705 553 aaKnown RBP14.91□□□□□ -0.02
NR1H3-235ENST00000616973 OR1E2P47887 323 aa14.91□□□□□ -0.02
NR1H3-235ENST00000616973 CCT3P49368 545 aaKnown RBP14.91□□□□□ -0.02
NR1H3-235ENST00000616973 TPMTP51580 245 aa14.91□□□□□ -0.02
NR1H3-235ENST00000616973 SPIBQ01892 262 aa14.91□□□□□ -0.02
NR1H3-235ENST00000616973 MICAQ29983 383 aa14.91□□□□□ -0.02
NR1H3-235ENST00000616973 SPDYE7PQ495Y7 208 aa14.91□□□□□ -0.02
NR1H3-235ENST00000616973 FBXO43Q4G163 708 aa14.91□□□□□ -0.02
NR1H3-235ENST00000616973 TOR1AIP1Q5JTV8 583 aa14.91□□□□□ -0.02
NR1H3-235ENST00000616973 GTF2IRD2BQ6EKJ0 949 aa14.91□□□□□ -0.02
NR1H3-235ENST00000616973 GTF2IRD2Q86UP8 949 aa14.91□□□□□ -0.02
NR1H3-235ENST00000616973 CNIH3Q8TBE1 160 aa14.91□□□□□ -0.02
NR1H3-235ENST00000616973 LCN9Q8WX39 176 aa14.91□□□□□ -0.02
NR1H3-235ENST00000616973 HRASLS5Q96KN8 279 aa14.91□□□□□ -0.02
NR1H3-235ENST00000616973 AMDHD1Q96NU7 426 aa14.91□□□□□ -0.02
NR1H3-235ENST00000616973 PIP5K1AQ99755 562 aa14.91□□□□□ -0.02
NR1H3-235ENST00000616973 EXD2Q9NVH0 621 aa14.91□□□□□ -0.02
NR1H3-235ENST00000616973 ZNF624Q9P2J8 865 aaPredicted RBP14.91□□□□□ -0.02
NR1H3-235ENST00000616973 SNX5Q9Y5X3 404 aa14.91□□□□□ -0.02
NR1H3-235ENST00000616973 DGKBQ9Y6T7 804 aa14.91□□□□□ -0.02
NR1H3-235ENST00000616973 ISM1B1AKI9 464 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 HMGN4O00479 90 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 SCAMP1O15126 338 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 ERI3O43414 337 aaKnown RBP14.9□□□□□ -0.02
NR1H3-235ENST00000616973 MRPS14O60783 128 aaKnown RBP14.9□□□□□ -0.02
NR1H3-235ENST00000616973 EML2O95834 649 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 CYP4B1P13584 511 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 RHCEP18577 417 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 LIMS1P48059 325 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 TMBIM6P55061 237 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 KCNC4Q03721 635 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 MAD2L1BPQ15013 274 aaPredicted RBP14.9□□□□□ -0.02
NR1H3-235ENST00000616973 TPRG1LQ5T0D9 272 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 GPR107Q5VW38 600 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 TMEM64Q6YI46 380 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 B3GNT8Q7Z7M8 397 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 PAQR7Q86WK9 346 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 ACOT4Q8N9L9 421 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 OR10G2Q8NGC3 310 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 RPLP0P6Q8NHW5 317 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 APOBEC4Q8WW27 367 aaKnown RBP14.9□□□□□ -0.02
NR1H3-235ENST00000616973 SGCDQ92629 289 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 UCN3Q969E3 161 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 SLC22A18Q96BI1 424 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 NODALQ96S42 347 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 GLIPR2Q9H4G4 154 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 DUSP21Q9H596 190 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 PAK1IP1Q9NWT1 392 aaPredicted RBP14.9□□□□□ -0.02
NR1H3-235ENST00000616973 TPRKBQ9Y3C4 175 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 A6NCN8 305 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms