RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 UPK1BO75841 260 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 NAT2P11245 290 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 CD38P28907 300 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 PRDX3P30048 256 aaKnown RBP10.38□□□□□ -0.75
FAM3A-221ENST00000612856 HNRNPKP61978 463 aaKnown RBP eCLIP10.38□□□□□ -0.75
FAM3A-221ENST00000612856 PPP2R2BQ00005 443 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 GRB7Q14451 532 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 ATP6AP1Q15904 470 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 TMEM164Q5U3C3 297 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 KCTD11Q693B1 232 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 RETREG3Q86VR2 466 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 GKN2Q86XP6 184 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 DCUN1D3Q8IWE4 304 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 MFSD2AQ8NA29 543 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 ASB2Q96Q27 587 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 MALT1Q9UDY8 824 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 TRPM6Q9BX84 2022 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 TMEM202A6NGA9 273 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 SLC28A1O00337 649 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 CACNG3O60359 315 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 WBP4O75554 376 aaKnown RBP10.38□□□□□ -0.75
FAM3A-221ENST00000612856 BMP1P13497 986 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 NDUFV2P19404 249 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 CRHBPP24387 322 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 GSTM2P28161 218 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 ALDH3A2P51648 485 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 POU6F2P78424 691 aaPredicted RBP10.38□□□□□ -0.75
FAM3A-221ENST00000612856 LILRA6Q6PI73 481 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 UBE2Q1Q7Z7E8 422 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 TIGD4Q8IY51 512 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 ADGRG5Q8IZF4 528 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 CPXM2Q8N436 756 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 OR13H1Q8NG92 308 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 OR6Q1Q8NGQ2 317 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 RAB8BQ92930 207 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 ZNF689Q96CS4 500 aaPredicted RBP10.38□□□□□ -0.75
FAM3A-221ENST00000612856 Q96MT0 163 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 NELL2Q99435 816 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 NDC1Q9BTX1 674 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 UGT2B28Q9BY64 529 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 CMTM6Q9NX76 183 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 ENPP5Q9UJA9 477 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 SPG11Q96JI7 2443 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 MT-ND2P03891 347 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 HTR6P50406 440 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 HERVK_113P63132 956 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 SIM1P81133 766 aaPredicted RBP10.37□□□□□ -0.75
FAM3A-221ENST00000612856 ZXDBP98169 803 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 EMX1Q04741 257 aaPredicted RBP10.37□□□□□ -0.75
FAM3A-221ENST00000612856 RAPSNQ13702 412 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 TMEM196Q5HYL7 178 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 RBM48Q5RL73 367 aaKnown RBP10.37□□□□□ -0.75
FAM3A-221ENST00000612856 CCDC116Q8IYX3 515 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 METTL4Q8N3J2 472 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 ZNF707Q96C28 371 aaPredicted RBP10.37□□□□□ -0.75
FAM3A-221ENST00000612856 ERVK-6Q9BXR3 956 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 TEX12Q9BXU0 123 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 GPN2Q9H9Y4 310 aaPredicted RBP10.37□□□□□ -0.75
FAM3A-221ENST00000612856 FAM86C1Q9NVL1 165 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 VPS29Q9UBQ0 182 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 SPATA2Q9UM82 520 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 DLGAP4Q9Y2H0 992 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 SIP14410 1827 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 KERAO60938 352 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 MITFO75030 526 aaPredicted RBP10.37□□□□□ -0.75
FAM3A-221ENST00000612856 B3GALT4O96024 378 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 IL6P05231 212 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 CAPN3P20807 821 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 IGFBP5P24593 272 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 CD6P30203 668 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 HTRA4P83105 476 aaPredicted RBP10.37□□□□□ -0.75
FAM3A-221ENST00000612856 IFITM2Q01629 132 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 TOP3AQ13472 1001 aaPredicted RBP10.37□□□□□ -0.75
FAM3A-221ENST00000612856 TOR1AIP1Q5JTV8 583 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 LYPD8Q6UX82 237 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 TRAM1L1Q8N609 369 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 RAB7BQ96AH8 199 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 PDXPQ96GD0 296 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 MED30Q96HR3 178 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 PKMYT1Q99640 499 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 SORBS1Q9BX66 1292 aaKnown RBP10.37□□□□□ -0.75
FAM3A-221ENST00000612856 YTHDF1Q9BYJ9 559 aaKnown RBP10.37□□□□□ -0.75
FAM3A-221ENST00000612856 RANGRFQ9HD47 186 aaPredicted RBP10.37□□□□□ -0.75
FAM3A-221ENST00000612856 FARSBQ9NSD9 589 aaKnown RBP10.37□□□□□ -0.75
FAM3A-221ENST00000612856 C1orf109Q9NX04 203 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 SLAMF8Q9P0V8 285 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 LEF1Q9UJU2 399 aaPredicted RBP10.37□□□□□ -0.75
FAM3A-221ENST00000612856 POLR1DQ9Y2S0 133 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 ARID1AO14497 2285 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 SLC1A7O00341 560 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 AP3D1O14617 1153 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 PSIP1O75475 530 aaKnown RBP10.37□□□□□ -0.75
FAM3A-221ENST00000612856 UROSP10746 265 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 SLC6A2P23975 617 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 CCR7P32248 378 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 POLR2JP52435 117 aaKnown RBP10.37□□□□□ -0.75
FAM3A-221ENST00000612856 OR4D2P58180 307 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 RAB14P61106 215 aa10.37□□□□□ -0.75
FAM3A-221ENST00000612856 RPS14P62263 151 aaKnown RBP10.37□□□□□ -0.75
FAM3A-221ENST00000612856 CDK3Q00526 305 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms