RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 FAM227AF5H4B4 570 aa16.55■□□□□ 0.24
SREK1-216ENST00000612404 H0YIG0 161 aa16.55■□□□□ 0.24
SREK1-216ENST00000612404 RNASET2O00584 256 aaKnown RBP16.55■□□□□ 0.24
SREK1-216ENST00000612404 DSCR3O14972 297 aa16.55■□□□□ 0.24
SREK1-216ENST00000612404 GSC2O15499 205 aa16.55■□□□□ 0.24
SREK1-216ENST00000612404 SCN2BO60939 215 aa16.55■□□□□ 0.24
SREK1-216ENST00000612404 SCRG1O75711 98 aa16.55■□□□□ 0.24
SREK1-216ENST00000612404 TIAF1O95411 115 aa16.55■□□□□ 0.24
SREK1-216ENST00000612404 GSNP06396 782 aa16.55■□□□□ 0.24
SREK1-216ENST00000612404 CCL4P13236 92 aa16.55■□□□□ 0.24
SREK1-216ENST00000612404 RNH1P13489 461 aaKnown RBP16.55■□□□□ 0.24
SREK1-216ENST00000612404 OR1D4P47884 311 aa16.55■□□□□ 0.24
SREK1-216ENST00000612404 RAB38P57729 211 aa16.55■□□□□ 0.24
SREK1-216ENST00000612404 PSME3P61289 254 aa16.55■□□□□ 0.24
SREK1-216ENST00000612404 KCNJ2P63252 427 aa16.55■□□□□ 0.24
SREK1-216ENST00000612404 CYB5D1Q6P9G0 228 aa16.55■□□□□ 0.24
SREK1-216ENST00000612404 GLRX5Q86SX6 157 aa16.55■□□□□ 0.24
SREK1-216ENST00000612404 MVB12AQ96EY5 273 aa16.55■□□□□ 0.24
SREK1-216ENST00000612404 PEX11GQ96HA9 241 aa16.55■□□□□ 0.24
SREK1-216ENST00000612404 CMKLR1Q99788 373 aa16.55■□□□□ 0.24
SREK1-216ENST00000612404 YIPF2Q9BWQ6 316 aa16.55■□□□□ 0.24
SREK1-216ENST00000612404 RBCK1Q9BYM8 510 aa16.55■□□□□ 0.24
SREK1-216ENST00000612404 SLC35C2Q9NQQ7 365 aa16.55■□□□□ 0.24
SREK1-216ENST00000612404 PSME2Q9UL46 239 aa16.55■□□□□ 0.24
SREK1-216ENST00000612404 PCDHGA7Q9Y5G6 932 aa16.55■□□□□ 0.24
SREK1-216ENST00000612404 PTPRZ1P23471 2315 aaPredicted RBP16.55■□□□□ 0.24
SREK1-216ENST00000612404 KIF26BQ2KJY2 2108 aa16.55■□□□□ 0.24
SREK1-216ENST00000612404 COL27A1Q8IZC6 1860 aaPredicted RBP16.55■□□□□ 0.24
SREK1-216ENST00000612404 A0A1B0GX78 115 aa16.55■□□□□ 0.24
SREK1-216ENST00000612404 A0A1W2PRB8 838 aa16.55■□□□□ 0.24
SREK1-216ENST00000612404 POLR1CO15160 346 aaPredicted RBP16.55■□□□□ 0.24
SREK1-216ENST00000612404 C6orf47O95873 294 aa16.55■□□□□ 0.24
SREK1-216ENST00000612404 ABCB1P08183 1280 aaPredicted RBP16.55■□□□□ 0.24
SREK1-216ENST00000612404 PGM1P36871 562 aa16.55■□□□□ 0.24
SREK1-216ENST00000612404 CDKN2CP42773 168 aa16.55■□□□□ 0.24
SREK1-216ENST00000612404 GCGRP47871 477 aa16.55■□□□□ 0.24
SREK1-216ENST00000612404 LIMK1P53667 647 aa16.55■□□□□ 0.24
SREK1-216ENST00000612404 IL11RAQ14626 422 aa16.55■□□□□ 0.24
SREK1-216ENST00000612404 OR52E8Q6IFG1 317 aa16.55■□□□□ 0.24
SREK1-216ENST00000612404 DLEU7Q6UYE1 221 aa16.55■□□□□ 0.24
SREK1-216ENST00000612404 KIAA2013Q8IYS2 634 aa16.55■□□□□ 0.24
SREK1-216ENST00000612404 OR4A15Q8NGL6 344 aa16.55■□□□□ 0.24
SREK1-216ENST00000612404 DNAJB14Q8TBM8 379 aa16.55■□□□□ 0.24
SREK1-216ENST00000612404 COL26A1Q96A83 441 aa16.55■□□□□ 0.24
SREK1-216ENST00000612404 ZNF764Q96H86 408 aaPredicted RBP16.55■□□□□ 0.24
SREK1-216ENST00000612404 BBS4Q96RK4 519 aa16.55■□□□□ 0.24
SREK1-216ENST00000612404 TAS2R7Q9NYW3 318 aa16.55■□□□□ 0.24
SREK1-216ENST00000612404 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.55■□□□□ 0.24
SREK1-216ENST00000612404 CES1P1Q9UKY3 287 aa16.55■□□□□ 0.24
SREK1-216ENST00000612404 PCDHGB4Q9UN71 923 aa16.55■□□□□ 0.24
SREK1-216ENST00000612404 CDC14AQ9UNH5 594 aa16.55■□□□□ 0.24
SREK1-216ENST00000612404 MAN2B2Q9Y2E5 1009 aa16.55■□□□□ 0.24
SREK1-216ENST00000612404 FXYD1O00168 92 aa16.54■□□□□ 0.24
SREK1-216ENST00000612404 CYR61O00622 381 aa16.54■□□□□ 0.24
SREK1-216ENST00000612404 NVLO15381 856 aaKnown RBP16.54■□□□□ 0.24
SREK1-216ENST00000612404 NPPAP01160 153 aa16.54■□□□□ 0.24
SREK1-216ENST00000612404 C8orf89P0DMQ9 161 aa16.54■□□□□ 0.24
SREK1-216ENST00000612404 ISXQ2M1V0 245 aa16.54■□□□□ 0.24
SREK1-216ENST00000612404 SLCO6A1Q86UG4 719 aa16.54■□□□□ 0.24
SREK1-216ENST00000612404 NATD1Q8N6N6 113 aa16.54■□□□□ 0.24
SREK1-216ENST00000612404 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.54■□□□□ 0.24
SREK1-216ENST00000612404 CLIP3Q96DZ5 547 aa16.54■□□□□ 0.24
SREK1-216ENST00000612404 CCDC115Q96NT0 180 aa16.54■□□□□ 0.24
SREK1-216ENST00000612404 CDRT15Q96T59 188 aa16.54■□□□□ 0.24
SREK1-216ENST00000612404 HOPXQ9BPY8 73 aaPredicted RBP16.54■□□□□ 0.24
SREK1-216ENST00000612404 PAIP1Q9H074 479 aaKnown RBP16.54■□□□□ 0.24
SREK1-216ENST00000612404 SLC6A13Q9NSD5 602 aa16.54■□□□□ 0.24
SREK1-216ENST00000612404 GIMAP4Q9NUV9 329 aa16.54■□□□□ 0.24
SREK1-216ENST00000612404 ADA2Q9NZK5 511 aa16.54■□□□□ 0.24
SREK1-216ENST00000612404 BTNL2Q9UIR0 455 aa16.54■□□□□ 0.24
SREK1-216ENST00000612404 ENTPD4Q9Y227 616 aa16.54■□□□□ 0.24
SREK1-216ENST00000612404 ZNF780BQ9Y6R6 833 aa16.54■□□□□ 0.24
SREK1-216ENST00000612404 WDFY3Q8IZQ1 3526 aa16.54■□□□□ 0.24
SREK1-216ENST00000612404 CFAP54Q96N23 3096 aa16.54■□□□□ 0.24
SREK1-216ENST00000612404 A0A096LPI6 279 aa16.54■□□□□ 0.24
SREK1-216ENST00000612404 SPAARA0A1B0GVQ0 90 aa16.54■□□□□ 0.24
SREK1-216ENST00000612404 CSO75390 466 aaKnown RBP16.54■□□□□ 0.24
SREK1-216ENST00000612404 ERN1O75460 977 aaKnown RBP16.54■□□□□ 0.24
SREK1-216ENST00000612404 MT-CO3P00414 261 aa16.54■□□□□ 0.24
SREK1-216ENST00000612404 NTRK1P04629 796 aa16.54■□□□□ 0.24
SREK1-216ENST00000612404 NTSP30990 170 aa16.54■□□□□ 0.24
SREK1-216ENST00000612404 HNRNPFP52597 415 aaKnown RBP16.54■□□□□ 0.24
SREK1-216ENST00000612404 MANFP55145 182 aaKnown RBP16.54■□□□□ 0.24
SREK1-216ENST00000612404 LRRC74AQ0VAA2 488 aa16.54■□□□□ 0.24
SREK1-216ENST00000612404 CDCP2Q5VXM1 449 aa16.54■□□□□ 0.24
SREK1-216ENST00000612404 BNC2Q6ZN30 1099 aaPredicted RBP16.54■□□□□ 0.24
SREK1-216ENST00000612404 ZNF621Q6ZSS3 439 aa16.54■□□□□ 0.24
SREK1-216ENST00000612404 BPHLQ86WA6 291 aaPredicted RBP16.54■□□□□ 0.24
SREK1-216ENST00000612404 BMPERQ8N8U9 685 aa16.54■□□□□ 0.24
SREK1-216ENST00000612404 TMEM52Q8NDY8 209 aa16.54■□□□□ 0.24
SREK1-216ENST00000612404 OR51Q1Q8NH59 317 aa16.54■□□□□ 0.24
SREK1-216ENST00000612404 DNAJB8Q8NHS0 232 aa16.54■□□□□ 0.24
SREK1-216ENST00000612404 CLPTM1LQ96KA5 538 aa16.54■□□□□ 0.24
SREK1-216ENST00000612404 CGREF1Q99674 301 aa16.54■□□□□ 0.24
SREK1-216ENST00000612404 TRIM8Q9BZR9 551 aa16.54■□□□□ 0.24
SREK1-216ENST00000612404 CLK4Q9HAZ1 481 aaKnown RBP16.54■□□□□ 0.24
SREK1-216ENST00000612404 ZNF304Q9HCX3 659 aa16.54■□□□□ 0.24
SREK1-216ENST00000612404 VAPAQ9P0L0 249 aa16.54■□□□□ 0.24
SREK1-216ENST00000612404 PCDHB14Q9Y5E9 798 aa16.54■□□□□ 0.24
SREK1-216ENST00000612404 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms