RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 IDSP22304 550 aa9.92□□□□□ -0.82
CTCFL-216ENST00000608263 CA5AP35218 305 aa9.92□□□□□ -0.82
CTCFL-216ENST00000608263 CBSP35520 551 aa9.92□□□□□ -0.82
CTCFL-216ENST00000608263 ITGA1P56199 1179 aa9.92□□□□□ -0.82
CTCFL-216ENST00000608263 RAB8AP61006 207 aa9.92□□□□□ -0.82
CTCFL-216ENST00000608263 SPIN4Q56A73 249 aa9.92□□□□□ -0.82
CTCFL-216ENST00000608263 COMMD6Q7Z4G1 85 aa9.92□□□□□ -0.82
CTCFL-216ENST00000608263 B3GNT7Q8NFL0 401 aa9.92□□□□□ -0.82
CTCFL-216ENST00000608263 POP5Q969H6 163 aaKnown RBP9.92□□□□□ -0.82
CTCFL-216ENST00000608263 TMCO6Q96DC7 493 aa9.92□□□□□ -0.82
CTCFL-216ENST00000608263 C11orf24Q96F05 449 aaPredicted RBP9.92□□□□□ -0.82
CTCFL-216ENST00000608263 SCRN2Q96FV2 425 aa9.92□□□□□ -0.82
CTCFL-216ENST00000608263 ZFP3Q96NJ6 502 aa9.92□□□□□ -0.82
CTCFL-216ENST00000608263 NTMT1Q9BV86 223 aa9.92□□□□□ -0.82
CTCFL-216ENST00000608263 SAGE1Q9NXZ1 904 aa9.92□□□□□ -0.82
CTCFL-216ENST00000608263 MED16Q9Y2X0 877 aa9.92□□□□□ -0.82
CTCFL-216ENST00000608263 PCDHGB6Q9Y5F9 930 aa9.92□□□□□ -0.82
CTCFL-216ENST00000608263 CPED1A4D0V7 1026 aa9.92□□□□□ -0.82
CTCFL-216ENST00000608263 ARHGEF33A8MVX0 844 aa9.92□□□□□ -0.82
CTCFL-216ENST00000608263 LATO43561 262 aa9.92□□□□□ -0.82
CTCFL-216ENST00000608263 HOXB6P17509 224 aaKnown RBP9.92□□□□□ -0.82
CTCFL-216ENST00000608263 ACVR1Q04771 509 aa9.92□□□□□ -0.82
CTCFL-216ENST00000608263 GINS1Q14691 196 aa9.92□□□□□ -0.82
CTCFL-216ENST00000608263 MBTPS1Q14703 1052 aa9.92□□□□□ -0.82
CTCFL-216ENST00000608263 ANGPT1Q15389 498 aa9.92□□□□□ -0.82
CTCFL-216ENST00000608263 PRAMEF13Q5VWM6 474 aa9.92□□□□□ -0.82
CTCFL-216ENST00000608263 STEAP3Q658P3 488 aa9.92□□□□□ -0.82
CTCFL-216ENST00000608263 LIMS2Q7Z4I7 341 aa9.92□□□□□ -0.82
CTCFL-216ENST00000608263 OXR1Q8N573 874 aa9.92□□□□□ -0.82
CTCFL-216ENST00000608263 MRPL43Q8N983 215 aaKnown RBP9.92□□□□□ -0.82
CTCFL-216ENST00000608263 RHOXF1Q8NHV9 184 aa9.92□□□□□ -0.82
CTCFL-216ENST00000608263 SMARCD2Q92925 531 aa9.92□□□□□ -0.82
CTCFL-216ENST00000608263 NEIL2Q969S2 332 aa9.92□□□□□ -0.82
CTCFL-216ENST00000608263 LMLNQ96KR4 655 aa9.92□□□□□ -0.82
CTCFL-216ENST00000608263 QRFPRQ96P65 431 aa9.92□□□□□ -0.82
CTCFL-216ENST00000608263 TMEM246Q9BRR3 403 aa9.92□□□□□ -0.82
CTCFL-216ENST00000608263 WACQ9BTA9 647 aa9.92□□□□□ -0.82
CTCFL-216ENST00000608263 TSSK6Q9BXA6 273 aa9.92□□□□□ -0.82
CTCFL-216ENST00000608263 SLC12A9Q9BXP2 914 aa9.92□□□□□ -0.82
CTCFL-216ENST00000608263 XKR8Q9H6D3 395 aa9.92□□□□□ -0.82
CTCFL-216ENST00000608263 RLIMQ9NVW2 624 aa9.92□□□□□ -0.82
CTCFL-216ENST00000608263 TAS2R9Q9NYW1 312 aa9.92□□□□□ -0.82
CTCFL-216ENST00000608263 SNX7Q9UNH6 387 aa9.92□□□□□ -0.82
CTCFL-216ENST00000608263 SCAMP2O15127 329 aaKnown RBP9.91□□□□□ -0.82
CTCFL-216ENST00000608263 KAT7O95251 611 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 BMP1P13497 986 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 PRG2P13727 222 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 KELP23276 732 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 AOAHP28039 575 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 SMIM11AP58511 58 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 HBA1P69905 142 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 PCDH1Q08174 1060 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 DSC1Q08554 894 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 MTAPQ13126 283 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 PIN1Q13526 163 aaPredicted RBP9.91□□□□□ -0.82
CTCFL-216ENST00000608263 C1orf61Q13536 156 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 UGT8Q16880 541 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 INAVAQ3KP66 663 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 SLC35F1Q5T1Q4 408 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 IDNKQ5T6J7 187 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.91□□□□□ -0.82
CTCFL-216ENST00000608263 RIMKLAQ8IXN7 391 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 CELF2-AS1Q8N7Q2 184 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 ZNF740Q8NDX6 193 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 GGHQ92820 318 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 FGF13Q92913 245 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 C12orf66Q96MD2 445 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 MACROD1Q9BQ69 325 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 FZD3Q9NPG1 666 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 RP1P56715 2156 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 GFRA2O00451 464 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 FRS3O43559 492 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 UPK1BO75841 260 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 KCNK5O95279 499 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 KLF8O95600 359 aaPredicted RBP9.91□□□□□ -0.82
CTCFL-216ENST00000608263 OR12D1P0DN82 309 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 PRKAR1AP10644 381 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 BMP7P18075 431 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 CELP19835 753 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 CCT3P49368 545 aaKnown RBP9.91□□□□□ -0.82
CTCFL-216ENST00000608263 NCBP2P52298 156 aaKnown RBP eCLIP9.91□□□□□ -0.82
CTCFL-216ENST00000608263 SNRPD2P62316 118 aaKnown RBP9.91□□□□□ -0.82
CTCFL-216ENST00000608263 TIAL1Q01085 375 aaKnown RBP eCLIP9.91□□□□□ -0.82
CTCFL-216ENST00000608263 CSTF1Q05048 431 aaKnown RBP9.91□□□□□ -0.82
CTCFL-216ENST00000608263 DHCR24Q15392 516 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 SPHARQ15513 63 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 MINDY4Q4G0A6 757 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 COX20Q5RI15 118 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 C9orf50Q5SZB4 431 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 CDC73Q6P1J9 531 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 MARCH9Q86YJ5 346 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 ALDH16A1Q8IZ83 802 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 MINDY2Q8NBR6 621 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 ADAMTS15Q8TE58 950 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 SLC35G5Q96KT7 338 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 OR5M11Q96RB7 305 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 NIPSNAP1Q9BPW8 284 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 SLC46A2Q9BY10 475 aa9.91□□□□□ -0.82
CTCFL-216ENST00000608263 TP63Q9H3D4 680 aaPredicted RBP9.91□□□□□ -0.82
CTCFL-216ENST00000608263 SFXN1Q9H9B4 322 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms