RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 CD3GP09693 182 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 GPX6P59796 221 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 ARSJQ5FYB0 599 aaPredicted RBP9.25□□□□□ -0.93
CSMD1-217ENST00000602723 COMMD7Q86VX2 200 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 OR8J3Q8NGG0 315 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 P2RY13Q9BPV8 354 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 STRA6Q9BX79 667 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 LDAHQ9H6V9 325 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 CHD5Q8TDI0 1954 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 SH3PXD2BA1X283 911 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 PCDH17O14917 1159 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 TBX18O95935 607 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 PFKLP17858 780 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 PRKXP51817 358 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 ACTR1AP61163 376 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 POU4F2Q12837 409 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 DUS1LQ6P1R4 473 aaKnown RBP9.25□□□□□ -0.93
CSMD1-217ENST00000602723 TMIGD1Q6UXZ0 262 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 ANKRD13BQ86YJ7 626 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 TICAM1Q8IUC6 712 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 SMOC2Q9H3U7 446 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 UPK3BL1B0FP48 263 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 ANKRD66B4E2M5 251 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 UPK3BL2E5RIL1 263 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 BOLA2-SMG1P6H3BVE0 249 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 ACTA2P62736 377 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 ACTG2P63267 376 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 GINS1Q14691 196 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 SOWAHAQ2M3V2 549 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 C2orf27AQ580R0 203 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 ZNF550Q7Z398 422 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 MAF1Q9H063 256 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 SAV1Q9H4B6 383 aaPredicted RBP9.25□□□□□ -0.93
CSMD1-217ENST00000602723 GALPQ9UBC7 116 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 MRPS17Q9Y2R5 130 aaKnown RBP9.25□□□□□ -0.93
CSMD1-217ENST00000602723 PCDHB11Q9Y5F2 797 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 PIGBOS1A0A0B4J2F0 54 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 C1orf196B1AJZ1 125 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 GRID2O43424 1007 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 AHSA1O95433 338 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 ATP4BP51164 291 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 OC90Q02509 493 aaPredicted RBP9.25□□□□□ -0.93
CSMD1-217ENST00000602723 SYPL2Q5VXT5 272 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 PRSS55Q6UWB4 352 aaPredicted RBP9.25□□□□□ -0.93
CSMD1-217ENST00000602723 MMAAQ8IVH4 418 aaKnown RBP9.25□□□□□ -0.93
CSMD1-217ENST00000602723 ACTL8Q9H568 366 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 PABPC4LP0CB38 370 aaKnown RBP9.25□□□□□ -0.93
CSMD1-217ENST00000602723 THEGLP0DJG4 465 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 VIPR1P32241 457 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 PDGFRLQ15198 375 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 RAB11BQ15907 218 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 CYP27C1Q4G0S4 372 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 ARHGAP40Q5TG30 622 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 FBXL22Q6P050 247 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 ESX1Q8N693 406 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 SLC25A44Q96H78 314 aaPredicted RBP9.25□□□□□ -0.93
CSMD1-217ENST00000602723 HSD3B7Q9H2F3 369 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 XPNPEP1Q9NQW7 623 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 RALGAPA1Q6GYQ0 2036 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 CD8B2A6NJW9 211 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 SLC16A8O95907 504 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 CD8BP10966 210 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 AGXTP21549 392 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 GDF5P43026 501 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 MAGEA6P43360 314 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 TMEM151AQ8N4L1 468 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 POLMQ9NP87 494 aaPredicted RBP9.25□□□□□ -0.93
CSMD1-217ENST00000602723 OR2S2Q9NQN1 319 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 EPHA6Q9UF33 1036 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 HS3ST4Q9Y661 456 aa9.25□□□□□ -0.93
CSMD1-217ENST00000602723 RIMBP3CA6NJZ7 1639 aa9.24□□□□□ -0.93
CSMD1-217ENST00000602723 RIMBP3BA6NNM3 1639 aa9.24□□□□□ -0.93
CSMD1-217ENST00000602723 RIMBP3Q9UFD9 1639 aa9.24□□□□□ -0.93
CSMD1-217ENST00000602723 LOC730098B7Z3J9 87 aa9.24□□□□□ -0.93
CSMD1-217ENST00000602723 RFPL2O75678 378 aa9.24□□□□□ -0.93
CSMD1-217ENST00000602723 RBBP9O75884 186 aa9.24□□□□□ -0.93
CSMD1-217ENST00000602723 CCNOP22674 350 aa9.24□□□□□ -0.93
CSMD1-217ENST00000602723 MFSD13AQ14CX5 517 aa9.24□□□□□ -0.93
CSMD1-217ENST00000602723 C10orf62Q5T681 223 aaPredicted RBP9.24□□□□□ -0.93
CSMD1-217ENST00000602723 CMASQ8NFW8 434 aaPredicted RBP9.24□□□□□ -0.93
CSMD1-217ENST00000602723 POLDIP3Q9BY77 421 aaKnown RBP9.24□□□□□ -0.93
CSMD1-217ENST00000602723 OR51B5Q9H339 312 aa9.24□□□□□ -0.93
CSMD1-217ENST00000602723 KCNJ13O60928 360 aa9.24□□□□□ -0.93
CSMD1-217ENST00000602723 ZNF35P13682 527 aa9.24□□□□□ -0.93
CSMD1-217ENST00000602723 SOX2P48431 317 aa9.24□□□□□ -0.93
CSMD1-217ENST00000602723 OLIG2Q13516 323 aa9.24□□□□□ -0.93
CSMD1-217ENST00000602723 LRIF1Q5T3J3 769 aa9.24□□□□□ -0.93
CSMD1-217ENST00000602723 UGT2A3Q6UWM9 527 aa9.24□□□□□ -0.93
CSMD1-217ENST00000602723 TIFABQ6ZNK6 161 aa9.24□□□□□ -0.93
CSMD1-217ENST00000602723 DCUN1D3Q8IWE4 304 aa9.24□□□□□ -0.93
CSMD1-217ENST00000602723 OR6N1Q8NGY5 312 aa9.24□□□□□ -0.93
CSMD1-217ENST00000602723 ASB6Q9NWX5 421 aa9.24□□□□□ -0.93
CSMD1-217ENST00000602723 ERVK13-1Q9NX77 482 aa9.24□□□□□ -0.93
CSMD1-217ENST00000602723 CACNG4Q9UBN1 327 aa9.24□□□□□ -0.93
CSMD1-217ENST00000602723 BCL9LQ86UU0 1499 aa9.24□□□□□ -0.93
CSMD1-217ENST00000602723 ALPK2Q86TB3 2170 aa9.24□□□□□ -0.93
CSMD1-217ENST00000602723 PI4KAP42356 2102 aa9.24□□□□□ -0.93
CSMD1-217ENST00000602723 CACNA1SQ13698 1873 aa9.24□□□□□ -0.93
CSMD1-217ENST00000602723 HMX3A6NHT5 357 aa9.24□□□□□ -0.93
CSMD1-217ENST00000602723 SSX4O60224 188 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms