RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 OR5M9Q8NGP3 310 aa12.19□□□□□ -0.46
RPS28-204ENST00000602140 OR5M3Q8NGP4 307 aa12.19□□□□□ -0.46
RPS28-204ENST00000602140 OR8K3Q8NH51 312 aa12.19□□□□□ -0.46
RPS28-204ENST00000602140 ZNF473Q8WTR7 871 aaKnown RBP12.19□□□□□ -0.46
RPS28-204ENST00000602140 UBXN10Q96LJ8 280 aa12.19□□□□□ -0.46
RPS28-204ENST00000602140 FAM173AQ9BQD7 235 aa12.19□□□□□ -0.46
RPS28-204ENST00000602140 TBCDQ9BTW9 1192 aa12.19□□□□□ -0.46
RPS28-204ENST00000602140 CD244Q9BZW8 370 aa12.19□□□□□ -0.46
RPS28-204ENST00000602140 DPH5Q9H2P9 285 aa12.19□□□□□ -0.46
RPS28-204ENST00000602140 KCNJ16Q9NPI9 418 aa12.19□□□□□ -0.46
RPS28-204ENST00000602140 NPDC1Q9NQX5 325 aaPredicted RBP12.19□□□□□ -0.46
RPS28-204ENST00000602140 PNPLA3Q9NST1 481 aa12.19□□□□□ -0.46
RPS28-204ENST00000602140 SPACA6W5XKT8 324 aa12.19□□□□□ -0.46
RPS28-204ENST00000602140 ANKRD17O75179 2603 aaKnown RBP12.19□□□□□ -0.46
RPS28-204ENST00000602140 F8P00451 2351 aa12.19□□□□□ -0.46
RPS28-204ENST00000602140 HIVEP1P15822 2718 aa12.18□□□□□ -0.46
RPS28-204ENST00000602140 FAM159BA6NKW6 160 aa12.18□□□□□ -0.46
RPS28-204ENST00000602140 SAP18O00422 153 aaKnown RBP12.18□□□□□ -0.46
RPS28-204ENST00000602140 ZNF354AO60765 605 aaPredicted RBP12.18□□□□□ -0.46
RPS28-204ENST00000602140 TOXO94900 526 aa12.18□□□□□ -0.46
RPS28-204ENST00000602140 GLSO94925 669 aaPredicted RBP12.18□□□□□ -0.46
RPS28-204ENST00000602140 ETHE1O95571 254 aa12.18□□□□□ -0.46
RPS28-204ENST00000602140 PCNAP12004 261 aa12.18□□□□□ -0.46
RPS28-204ENST00000602140 HIST1H1TP22492 207 aaPredicted RBP12.18□□□□□ -0.46
RPS28-204ENST00000602140 CPN2P22792 545 aa12.18□□□□□ -0.46
RPS28-204ENST00000602140 GP5P40197 560 aa12.18□□□□□ -0.46
RPS28-204ENST00000602140 CASP2P42575 452 aa12.18□□□□□ -0.46
RPS28-204ENST00000602140 MAGEA5P43359 124 aa12.18□□□□□ -0.46
RPS28-204ENST00000602140 NUP107P57740 925 aa12.18□□□□□ -0.46
RPS28-204ENST00000602140 TFF3Q07654 80 aa12.18□□□□□ -0.46
RPS28-204ENST00000602140 CALCOCO2Q13137 446 aa12.18□□□□□ -0.46
RPS28-204ENST00000602140 ZKSCAN8Q15776 578 aaPredicted RBP12.18□□□□□ -0.46
RPS28-204ENST00000602140 TBCCQ15814 346 aa12.18□□□□□ -0.46
RPS28-204ENST00000602140 AP5B1Q2VPB7 878 aa12.18□□□□□ -0.46
RPS28-204ENST00000602140 TMEM35AQ53FP2 167 aa12.18□□□□□ -0.46
RPS28-204ENST00000602140 NDUFAF5Q5TEU4 345 aa12.18□□□□□ -0.46
RPS28-204ENST00000602140 OPN5Q6U736 354 aa12.18□□□□□ -0.46
RPS28-204ENST00000602140 C3orf62Q6ZUJ4 267 aa12.18□□□□□ -0.46
RPS28-204ENST00000602140 FAM47EQ6ZV65 393 aa12.18□□□□□ -0.46
RPS28-204ENST00000602140 ACAD11Q709F0 780 aa12.18□□□□□ -0.46
RPS28-204ENST00000602140 LRRC70Q7Z2Q7 622 aa12.18□□□□□ -0.46
RPS28-204ENST00000602140 OR4N5Q8IXE1 308 aa12.18□□□□□ -0.46
RPS28-204ENST00000602140 TMEM251Q8N6I4 163 aa12.18□□□□□ -0.46
RPS28-204ENST00000602140 GOLM1Q8NBJ4 401 aa12.18□□□□□ -0.46
RPS28-204ENST00000602140 OR5L2Q8NGL0 311 aa12.18□□□□□ -0.46
RPS28-204ENST00000602140 ZNF721Q8TF20 911 aa12.18□□□□□ -0.46
RPS28-204ENST00000602140 ANKRD9Q96BM1 317 aaPredicted RBP12.18□□□□□ -0.46
RPS28-204ENST00000602140 SGCZQ96LD1 299 aa12.18□□□□□ -0.46
RPS28-204ENST00000602140 SMC6Q96SB8 1091 aa12.18□□□□□ -0.46
RPS28-204ENST00000602140 PHACTR1Q9C0D0 580 aa12.18□□□□□ -0.46
RPS28-204ENST00000602140 ALG9Q9H6U8 611 aa12.18□□□□□ -0.46
RPS28-204ENST00000602140 GRPEL1Q9HAV7 217 aa12.18□□□□□ -0.46
RPS28-204ENST00000602140 IL1RL2Q9HB29 575 aa12.18□□□□□ -0.46
RPS28-204ENST00000602140 SACM1LQ9NTJ5 587 aa12.18□□□□□ -0.46
RPS28-204ENST00000602140 COPS7AQ9UBW8 275 aa12.18□□□□□ -0.46
RPS28-204ENST00000602140 LIPGQ9Y5X9 500 aa12.18□□□□□ -0.46
RPS28-204ENST00000602140 OR14I1A6ND48 311 aa12.17□□□□□ -0.46
RPS28-204ENST00000602140 FOXO6A8MYZ6 492 aa12.17□□□□□ -0.46
RPS28-204ENST00000602140 EIF3HO15372 352 aaKnown RBP eCLIP12.17□□□□□ -0.46
RPS28-204ENST00000602140 FGF17O60258 216 aa12.17□□□□□ -0.46
RPS28-204ENST00000602140 SCELO95171 688 aa12.17□□□□□ -0.46
RPS28-204ENST00000602140 IGHG3P01860 377 aa12.17□□□□□ -0.46
RPS28-204ENST00000602140 C1QAP02745 245 aa12.17□□□□□ -0.46
RPS28-204ENST00000602140 P04436 131 aa12.17□□□□□ -0.46
RPS28-204ENST00000602140 CCL3P10147 92 aa12.17□□□□□ -0.46
RPS28-204ENST00000602140 ACVR2AP27037 513 aa12.17□□□□□ -0.46
RPS28-204ENST00000602140 SPRP35270 261 aaPredicted RBP12.17□□□□□ -0.46
RPS28-204ENST00000602140 SSR2P43308 183 aa12.17□□□□□ -0.46
RPS28-204ENST00000602140 DNASE1L1P49184 302 aa12.17□□□□□ -0.46
RPS28-204ENST00000602140 RIPPLY3P57055 190 aa12.17□□□□□ -0.46
RPS28-204ENST00000602140 E2F2Q14209 437 aa12.17□□□□□ -0.46
RPS28-204ENST00000602140 TESK1Q15569 626 aa12.17□□□□□ -0.46
RPS28-204ENST00000602140 MED27Q6P2C8 311 aa12.17□□□□□ -0.46
RPS28-204ENST00000602140 ZNF585AQ6P3V2 769 aa12.17□□□□□ -0.46
RPS28-204ENST00000602140 RAPH1Q70E73 1250 aa12.17□□□□□ -0.46
RPS28-204ENST00000602140 CHSY3Q70JA7 882 aa12.17□□□□□ -0.46
RPS28-204ENST00000602140 CYS1Q717R9 158 aa12.17□□□□□ -0.46
RPS28-204ENST00000602140 TRILQ7L0X0 811 aa12.17□□□□□ -0.46
RPS28-204ENST00000602140 CTAGE3PQ8IX95 158 aa12.17□□□□□ -0.46
RPS28-204ENST00000602140 LAS2Q8IYD9 372 aa12.17□□□□□ -0.46
RPS28-204ENST00000602140 FAM109AQ8N4B1 249 aa12.17□□□□□ -0.46
RPS28-204ENST00000602140 OR7G3Q8NG95 312 aa12.17□□□□□ -0.46
RPS28-204ENST00000602140 OR10Q1Q8NGQ4 319 aa12.17□□□□□ -0.46
RPS28-204ENST00000602140 STAG3L4Q8TBR4 150 aa12.17□□□□□ -0.46
RPS28-204ENST00000602140 UBE2E3Q969T4 207 aa12.17□□□□□ -0.46
RPS28-204ENST00000602140 ERP44Q9BS26 406 aa12.17□□□□□ -0.46
RPS28-204ENST00000602140 SORBS1Q9BX66 1292 aaKnown RBP12.17□□□□□ -0.46
RPS28-204ENST00000602140 OR51B5Q9H339 312 aa12.17□□□□□ -0.46
RPS28-204ENST00000602140 TUBA8Q9NY65 449 aaPredicted RBP12.17□□□□□ -0.46
RPS28-204ENST00000602140 NUDT4Q9NZJ9 180 aa12.17□□□□□ -0.46
RPS28-204ENST00000602140 WHRNQ9P202 907 aa12.17□□□□□ -0.46
RPS28-204ENST00000602140 TNFRSF10DQ9UBN6 386 aa12.17□□□□□ -0.46
RPS28-204ENST00000602140 RNF14Q9UBS8 474 aa12.17□□□□□ -0.46
RPS28-204ENST00000602140 A0A1B0GVC2 190 aa12.16□□□□□ -0.46
RPS28-204ENST00000602140 ATP6AP2A0A1C7CYW4 349 aa12.16□□□□□ -0.46
RPS28-204ENST00000602140 FAM187AA6NFU0 413 aa12.16□□□□□ -0.46
RPS28-204ENST00000602140 FIGNL2A6NMB9 653 aa12.16□□□□□ -0.46
RPS28-204ENST00000602140 SUPT3HB4E1H0 165 aa12.16□□□□□ -0.46
RPS28-204ENST00000602140 K7EPI3 171 aa12.16□□□□□ -0.46
RPS28-204ENST00000602140 UBXN8O00124 270 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms