RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 UMODP07911 640 aa17.74■□□□□ 0.43
CCDC9-205ENST00000600117 CD63P08962 238 aa17.74■□□□□ 0.43
CCDC9-205ENST00000600117 PRR35P0CG20 571 aa17.74■□□□□ 0.43
CCDC9-205ENST00000600117 ALOX15P16050 662 aaPredicted RBP17.74■□□□□ 0.43
CCDC9-205ENST00000600117 WT1P19544 449 aaPredicted RBP17.74■□□□□ 0.43
CCDC9-205ENST00000600117 IL10P22301 178 aa17.74■□□□□ 0.43
CCDC9-205ENST00000600117 HNRNPFP52597 415 aaKnown RBP17.74■□□□□ 0.43
CCDC9-205ENST00000600117 GYS2P54840 703 aa17.74■□□□□ 0.43
CCDC9-205ENST00000600117 RPS15P62841 145 aaKnown RBP17.74■□□□□ 0.43
CCDC9-205ENST00000600117 FOXK1P85037 733 aa17.74■□□□□ 0.43
CCDC9-205ENST00000600117 OCA2Q04671 838 aa17.74■□□□□ 0.43
CCDC9-205ENST00000600117 RFTN2Q52LD8 501 aaPredicted RBP17.74■□□□□ 0.43
CCDC9-205ENST00000600117 C6orf136Q5SQH8 315 aa17.74■□□□□ 0.43
CCDC9-205ENST00000600117 SHISA6Q6ZSJ9 500 aa17.74■□□□□ 0.43
CCDC9-205ENST00000600117 LAPTM4BQ86VI4 370 aa17.74■□□□□ 0.43
CCDC9-205ENST00000600117 TMEM52Q8NDY8 209 aa17.74■□□□□ 0.43
CCDC9-205ENST00000600117 OR2Y1Q8NGV0 311 aa17.74■□□□□ 0.43
CCDC9-205ENST00000600117 KIAA1143Q96AT1 154 aaPredicted RBP17.74■□□□□ 0.43
CCDC9-205ENST00000600117 MIEF2Q96C03 454 aa17.74■□□□□ 0.43
CCDC9-205ENST00000600117 TUBGCP3Q96CW5 907 aa17.74■□□□□ 0.43
CCDC9-205ENST00000600117 PPP3R2Q96LZ3 170 aa17.74■□□□□ 0.43
CCDC9-205ENST00000600117 EPN3Q9H201 632 aa17.74■□□□□ 0.43
CCDC9-205ENST00000600117 ACTL8Q9H568 366 aa17.74■□□□□ 0.43
CCDC9-205ENST00000600117 SOX17Q9H6I2 414 aaPredicted RBP17.74■□□□□ 0.43
CCDC9-205ENST00000600117 KCND3Q9UK17 655 aa17.74■□□□□ 0.43
CCDC9-205ENST00000600117 TCFL5Q9UL49 500 aa17.74■□□□□ 0.43
CCDC9-205ENST00000600117 MAN2B2Q9Y2E5 1009 aa17.74■□□□□ 0.43
CCDC9-205ENST00000600117 PTRH2Q9Y3E5 179 aaKnown RBP17.74■□□□□ 0.43
CCDC9-205ENST00000600117 POLR3HQ9Y535 204 aaPredicted RBP17.74■□□□□ 0.43
CCDC9-205ENST00000600117 USH1CQ9Y6N9 552 aa17.74■□□□□ 0.43
CCDC9-205ENST00000600117 A0A1W2PR48 441 aa17.73■□□□□ 0.43
CCDC9-205ENST00000600117 PROM1O43490 865 aa17.73■□□□□ 0.43
CCDC9-205ENST00000600117 PEX11AO75192 247 aa17.73■□□□□ 0.43
CCDC9-205ENST00000600117 FHP07954 510 aa17.73■□□□□ 0.43
CCDC9-205ENST00000600117 MAPK12P53778 367 aa17.73■□□□□ 0.43
CCDC9-205ENST00000600117 RPL38P63173 70 aaKnown RBP17.73■□□□□ 0.43
CCDC9-205ENST00000600117 KLC1Q07866 573 aa17.73■□□□□ 0.43
CCDC9-205ENST00000600117 TUBB8Q3ZCM7 444 aa17.73■□□□□ 0.43
CCDC9-205ENST00000600117 GALNTL6Q49A17 601 aa17.73■□□□□ 0.43
CCDC9-205ENST00000600117 VWA5B1Q5TIE3 1220 aa17.73■□□□□ 0.43
CCDC9-205ENST00000600117 NOXRED1Q6NXP6 359 aa17.73■□□□□ 0.43
CCDC9-205ENST00000600117 CYP20A1Q6UW02 462 aa17.73■□□□□ 0.43
CCDC9-205ENST00000600117 GPR180Q86V85 440 aa17.73■□□□□ 0.43
CCDC9-205ENST00000600117 PRSS58Q8IYP2 241 aa17.73■□□□□ 0.43
CCDC9-205ENST00000600117 FAM47BQ8NA70 645 aa17.73■□□□□ 0.43
CCDC9-205ENST00000600117 ADAMTS18Q8TE60 1221 aa17.73■□□□□ 0.43
CCDC9-205ENST00000600117 TM4SF18Q96CE8 201 aa17.73■□□□□ 0.43
CCDC9-205ENST00000600117 MAELQ96JY0 434 aaKnown RBP17.73■□□□□ 0.43
CCDC9-205ENST00000600117 EBPLQ9BY08 206 aa17.73■□□□□ 0.43
CCDC9-205ENST00000600117 AKTIPQ9H8T0 292 aa17.73■□□□□ 0.43
CCDC9-205ENST00000600117 TEX10Q9NXF1 929 aaPredicted RBP17.73■□□□□ 0.43
CCDC9-205ENST00000600117 PHF11Q9UIL8 331 aa17.73■□□□□ 0.43
CCDC9-205ENST00000600117 DLGAP4Q9Y2H0 992 aa17.73■□□□□ 0.43
CCDC9-205ENST00000600117 PADI2Q9Y2J8 665 aa17.73■□□□□ 0.43
CCDC9-205ENST00000600117 SCN2AQ99250 2005 aa17.72■□□□□ 0.43
CCDC9-205ENST00000600117 ARHGAP10A1A4S6 786 aa17.72■□□□□ 0.43
CCDC9-205ENST00000600117 OR2W5A6NFC9 320 aa17.72■□□□□ 0.43
CCDC9-205ENST00000600117 TRPC5OSA6NMA1 111 aa17.72■□□□□ 0.43
CCDC9-205ENST00000600117 PSMD12O00232 456 aaPredicted RBP17.72■□□□□ 0.43
CCDC9-205ENST00000600117 RECKO95980 971 aa17.72■□□□□ 0.43
CCDC9-205ENST00000600117 ANXA4P09525 319 aaPredicted RBP17.72■□□□□ 0.43
CCDC9-205ENST00000600117 CPN2P22792 545 aa17.72■□□□□ 0.43
CCDC9-205ENST00000600117 TRA2BP62995 288 aaKnown RBP17.72■□□□□ 0.43
CCDC9-205ENST00000600117 RHAGQ02094 409 aa17.72■□□□□ 0.43
CCDC9-205ENST00000600117 TNFRSF17Q02223 184 aa17.72■□□□□ 0.43
CCDC9-205ENST00000600117 SLC9B1Q4ZJI4 515 aa17.72■□□□□ 0.43
CCDC9-205ENST00000600117 ATP6AP1LQ52LC2 224 aa17.72■□□□□ 0.43
CCDC9-205ENST00000600117 C4orf17Q53FE4 359 aa17.72■□□□□ 0.43
CCDC9-205ENST00000600117 C18orf63Q68DL7 685 aa17.72■□□□□ 0.43
CCDC9-205ENST00000600117 LARP4Q71RC2 724 aaKnown RBP eCLIP17.72■□□□□ 0.43
CCDC9-205ENST00000600117 PTRH1Q86Y79 214 aaKnown RBP17.72■□□□□ 0.43
CCDC9-205ENST00000600117 EFCAB3Q8N7B9 438 aa17.72■□□□□ 0.43
CCDC9-205ENST00000600117 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.72■□□□□ 0.43
CCDC9-205ENST00000600117 C16orf78Q8WTQ4 265 aa17.72■□□□□ 0.43
CCDC9-205ENST00000600117 SLC45A3Q96JT2 553 aa17.72■□□□□ 0.43
CCDC9-205ENST00000600117 ZNF317Q96PQ6 595 aaPredicted RBP17.72■□□□□ 0.43
CCDC9-205ENST00000600117 PSMG3-AS1Q96PY0 264 aa17.72■□□□□ 0.43
CCDC9-205ENST00000600117 EFHD1Q9BUP0 239 aa17.72■□□□□ 0.43
CCDC9-205ENST00000600117 VN1R1Q9GZP7 353 aa17.72■□□□□ 0.43
CCDC9-205ENST00000600117 MS4A12Q9NXJ0 267 aa17.72■□□□□ 0.43
CCDC9-205ENST00000600117 TMED5Q9Y3A6 229 aa17.72■□□□□ 0.43
CCDC9-205ENST00000600117 ANKRD17O75179 2603 aaKnown RBP17.71■□□□□ 0.43
CCDC9-205ENST00000600117 IDSB3KWA1 339 aa17.71■□□□□ 0.43
CCDC9-205ENST00000600117 B4GALT2O60909 372 aa17.71■□□□□ 0.43
CCDC9-205ENST00000600117 VPS4BO75351 444 aa17.71■□□□□ 0.43
CCDC9-205ENST00000600117 CREG1O75629 220 aa17.71■□□□□ 0.43
CCDC9-205ENST00000600117 AIFM1O95831 613 aa17.71■□□□□ 0.43
CCDC9-205ENST00000600117 SDC1P18827 310 aa17.71■□□□□ 0.43
CCDC9-205ENST00000600117 JAK1P23458 1154 aa17.71■□□□□ 0.43
CCDC9-205ENST00000600117 TACR1P25103 407 aa17.71■□□□□ 0.43
CCDC9-205ENST00000600117 EPHA3P29320 983 aa17.71■□□□□ 0.43
CCDC9-205ENST00000600117 FOLR3P41439 243 aa17.71■□□□□ 0.43
CCDC9-205ENST00000600117 SMU1Q2TAY7 513 aa17.71■□□□□ 0.43
CCDC9-205ENST00000600117 EPGNQ6UW88 154 aa17.71■□□□□ 0.43
CCDC9-205ENST00000600117 RIPOR1Q6ZS17 1223 aa17.71■□□□□ 0.43
CCDC9-205ENST00000600117 LRRC34Q8IZ02 419 aa17.71■□□□□ 0.43
CCDC9-205ENST00000600117 STARD8Q92502 1023 aa17.71■□□□□ 0.43
CCDC9-205ENST00000600117 UCN3Q969E3 161 aa17.71■□□□□ 0.43
CCDC9-205ENST00000600117 CRB3Q9BUF7 120 aa17.71■□□□□ 0.43
CCDC9-205ENST00000600117 WDR55Q9H6Y2 383 aaPredicted RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms