RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 UBFD1O14562 309 aaKnown RBP12.95□□□□□ -0.34
UPF1-205ENST00000598209 RGS16O15492 202 aaPredicted RBP12.95□□□□□ -0.34
UPF1-205ENST00000598209 PROM1O43490 865 aa12.95□□□□□ -0.34
UPF1-205ENST00000598209 PRKRAO75569 313 aaKnown RBP12.95□□□□□ -0.34
UPF1-205ENST00000598209 IFNA16P05015 189 aa12.95□□□□□ -0.34
UPF1-205ENST00000598209 KLK1P06870 262 aa12.95□□□□□ -0.34
UPF1-205ENST00000598209 HSD3B1P14060 373 aa12.95□□□□□ -0.34
UPF1-205ENST00000598209 CREB1P16220 341 aa12.95□□□□□ -0.34
UPF1-205ENST00000598209 HSD3B2P26439 372 aa12.95□□□□□ -0.34
UPF1-205ENST00000598209 BUD31P41223 144 aaPredicted RBP12.95□□□□□ -0.34
UPF1-205ENST00000598209 TAS2R50P59544 299 aa12.95□□□□□ -0.34
UPF1-205ENST00000598209 ARG2P78540 354 aa12.95□□□□□ -0.34
UPF1-205ENST00000598209 SERTAD2Q14140 314 aa12.95□□□□□ -0.34
UPF1-205ENST00000598209 TERF2Q15554 542 aa12.95□□□□□ -0.34
UPF1-205ENST00000598209 PAGE2Q7Z2X7 111 aa12.95□□□□□ -0.34
UPF1-205ENST00000598209 CUZD1Q86UP6 607 aa12.95□□□□□ -0.34
UPF1-205ENST00000598209 CRLF3Q8IUI8 442 aa12.95□□□□□ -0.34
UPF1-205ENST00000598209 METTL4Q8N3J2 472 aa12.95□□□□□ -0.34
UPF1-205ENST00000598209 KIF2BQ8N4N8 673 aa12.95□□□□□ -0.34
UPF1-205ENST00000598209 B3GNT7Q8NFL0 401 aa12.95□□□□□ -0.34
UPF1-205ENST00000598209 ELP5Q8TE02 316 aa12.95□□□□□ -0.34
UPF1-205ENST00000598209 ANKRD9Q96BM1 317 aaPredicted RBP12.95□□□□□ -0.34
UPF1-205ENST00000598209 ZNF354BQ96LW1 612 aa12.95□□□□□ -0.34
UPF1-205ENST00000598209 FAM111AQ96PZ2 611 aa12.95□□□□□ -0.34
UPF1-205ENST00000598209 KCNA7Q96RP8 456 aa12.95□□□□□ -0.34
UPF1-205ENST00000598209 NMRK1Q9NWW6 199 aa12.95□□□□□ -0.34
UPF1-205ENST00000598209 STMN3Q9NZ72 180 aa12.95□□□□□ -0.34
UPF1-205ENST00000598209 SLC17A7Q9P2U7 560 aa12.95□□□□□ -0.34
UPF1-205ENST00000598209 ADAM29Q9UKF5 820 aa12.95□□□□□ -0.34
UPF1-205ENST00000598209 TIMM22Q9Y584 194 aa12.95□□□□□ -0.34
UPF1-205ENST00000598209 A0A1W2PR48 441 aa12.94□□□□□ -0.34
UPF1-205ENST00000598209 ARHGAP10A1A4S6 786 aa12.94□□□□□ -0.34
UPF1-205ENST00000598209 CCDC151A5D8V7 595 aa12.94□□□□□ -0.34
UPF1-205ENST00000598209 H3BQF6 201 aa12.94□□□□□ -0.34
UPF1-205ENST00000598209 FGF17O60258 216 aa12.94□□□□□ -0.34
UPF1-205ENST00000598209 TRIM13O60858 407 aa12.94□□□□□ -0.34
UPF1-205ENST00000598209 ULK1O75385 1050 aa12.94□□□□□ -0.34
UPF1-205ENST00000598209 AIFM1O95831 613 aa12.94□□□□□ -0.34
UPF1-205ENST00000598209 WDPCPO95876 746 aa12.94□□□□□ -0.34
UPF1-205ENST00000598209 F10P00742 488 aa12.94□□□□□ -0.34
UPF1-205ENST00000598209 NR2F6P10588 404 aa12.94□□□□□ -0.34
UPF1-205ENST00000598209 TPP2P29144 1249 aaPredicted RBP12.94□□□□□ -0.34
UPF1-205ENST00000598209 HTR6P50406 440 aa12.94□□□□□ -0.34
UPF1-205ENST00000598209 GALNT1Q10472 559 aaPredicted RBP12.94□□□□□ -0.34
UPF1-205ENST00000598209 TBL3Q12788 808 aaKnown RBP12.94□□□□□ -0.34
UPF1-205ENST00000598209 CSTF3Q12996 717 aaKnown RBP12.94□□□□□ -0.34
UPF1-205ENST00000598209 ZNF169Q14929 603 aaPredicted RBP12.94□□□□□ -0.34
UPF1-205ENST00000598209 TLR1Q15399 786 aa12.94□□□□□ -0.34
UPF1-205ENST00000598209 ELAVL1Q15717 326 aaKnown RBP12.94□□□□□ -0.34
UPF1-205ENST00000598209 IGFBP7Q16270 282 aa12.94□□□□□ -0.34
UPF1-205ENST00000598209 MEP1AQ16819 746 aa12.94□□□□□ -0.34
UPF1-205ENST00000598209 PRR30Q53SZ7 412 aaPredicted RBP12.94□□□□□ -0.34
UPF1-205ENST00000598209 ACER2Q5QJU3 275 aa12.94□□□□□ -0.34
UPF1-205ENST00000598209 CEP85LQ5SZL2 805 aa12.94□□□□□ -0.34
UPF1-205ENST00000598209 CCNYL2Q5T2Q4 361 aa12.94□□□□□ -0.34
UPF1-205ENST00000598209 COMMD6Q7Z4G1 85 aa12.94□□□□□ -0.34
UPF1-205ENST00000598209 OR4N5Q8IXE1 308 aa12.94□□□□□ -0.34
UPF1-205ENST00000598209 IQCKQ8N0W5 287 aa12.94□□□□□ -0.34
UPF1-205ENST00000598209 TMEM132CQ8N3T6 1108 aa12.94□□□□□ -0.34
UPF1-205ENST00000598209 SLC5A8Q8N695 610 aa12.94□□□□□ -0.34
UPF1-205ENST00000598209 APCDD1LQ8NCL9 501 aa12.94□□□□□ -0.34
UPF1-205ENST00000598209 CATSPER1Q8NEC5 780 aa12.94□□□□□ -0.34
UPF1-205ENST00000598209 CPT1CQ8TCG5 803 aa12.94□□□□□ -0.34
UPF1-205ENST00000598209 TCP10LQ8TDR4 215 aa12.94□□□□□ -0.34
UPF1-205ENST00000598209 HAS2Q92819 552 aa12.94□□□□□ -0.34
UPF1-205ENST00000598209 TANKQ92844 425 aa12.94□□□□□ -0.34
UPF1-205ENST00000598209 ZIM3Q96PE6 472 aa12.94□□□□□ -0.34
UPF1-205ENST00000598209 NPAS2Q99743 824 aa12.94□□□□□ -0.34
UPF1-205ENST00000598209 GATA5Q9BWX5 397 aaPredicted RBP12.94□□□□□ -0.34
UPF1-205ENST00000598209 RNF32Q9H0A6 362 aa12.94□□□□□ -0.34
UPF1-205ENST00000598209 WDR41Q9HAD4 459 aa12.94□□□□□ -0.34
UPF1-205ENST00000598209 SENP1Q9P0U3 644 aa12.94□□□□□ -0.34
UPF1-205ENST00000598209 VPS29Q9UBQ0 182 aa12.94□□□□□ -0.34
UPF1-205ENST00000598209 VTI1BQ9UEU0 232 aa12.94□□□□□ -0.34
UPF1-205ENST00000598209 PCDHGA10Q9Y5H3 936 aa12.94□□□□□ -0.34
UPF1-205ENST00000598209 TRBV11-1A0A0K0K1C0 115 aa12.93□□□□□ -0.34
UPF1-205ENST00000598209 GLOD5A6NK44 160 aa12.93□□□□□ -0.34
UPF1-205ENST00000598209 MAN1A2O60476 641 aa12.93□□□□□ -0.34
UPF1-205ENST00000598209 ERLIN1O75477 346 aa12.93□□□□□ -0.34
UPF1-205ENST00000598209 CHN1P15882 459 aa12.93□□□□□ -0.34
UPF1-205ENST00000598209 ALDH3A1P30838 453 aa12.93□□□□□ -0.34
UPF1-205ENST00000598209 TNFSF10P50591 281 aa12.93□□□□□ -0.34
UPF1-205ENST00000598209 CLCN2P51788 898 aa12.93□□□□□ -0.34
UPF1-205ENST00000598209 MAPK12P53778 367 aa12.93□□□□□ -0.34
UPF1-205ENST00000598209 FOXA1P55317 472 aa12.93□□□□□ -0.34
UPF1-205ENST00000598209 IGLV3-21P80748 117 aaPredicted RBP12.93□□□□□ -0.34
UPF1-205ENST00000598209 FOXK1P85037 733 aa12.93□□□□□ -0.34
UPF1-205ENST00000598209 FOLH1Q04609 750 aa12.93□□□□□ -0.34
UPF1-205ENST00000598209 ASPHQ12797 758 aa12.93□□□□□ -0.34
UPF1-205ENST00000598209 INPP5JQ15735 1006 aaPredicted RBP12.93□□□□□ -0.34
UPF1-205ENST00000598209 SCIMPQ6UWF3 145 aa12.93□□□□□ -0.34
UPF1-205ENST00000598209 BEST3Q8N1M1 668 aa12.93□□□□□ -0.34
UPF1-205ENST00000598209 C1orf52Q8N6N3 182 aaKnown RBP12.93□□□□□ -0.34
UPF1-205ENST00000598209 GBP7Q8N8V2 638 aaPredicted RBP12.93□□□□□ -0.34
UPF1-205ENST00000598209 C7orf57Q8NEG2 295 aa12.93□□□□□ -0.34
UPF1-205ENST00000598209 OR14A16Q8NHC5 309 aa12.93□□□□□ -0.34
UPF1-205ENST00000598209 DAZLQ92904 295 aaKnown RBP12.93□□□□□ -0.34
UPF1-205ENST00000598209 UCN3Q969E3 161 aa12.93□□□□□ -0.34
UPF1-205ENST00000598209 NCLNQ969V3 563 aa12.93□□□□□ -0.34
UPF1-205ENST00000598209 MIB2Q96AX9 1013 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms