RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 TCAIMQ8N3R3 496 aa11.2□□□□□ -0.62
SOX2-OT-228ENST00000597828 TMEM251Q8N6I4 163 aa11.2□□□□□ -0.62
SOX2-OT-228ENST00000597828 OR5M3Q8NGP4 307 aa11.2□□□□□ -0.62
SOX2-OT-228ENST00000597828 OR14A16Q8NHC5 309 aa11.2□□□□□ -0.62
SOX2-OT-228ENST00000597828 ZNF721Q8TF20 911 aa11.2□□□□□ -0.62
SOX2-OT-228ENST00000597828 RND1Q92730 232 aa11.2□□□□□ -0.62
SOX2-OT-228ENST00000597828 ANKRD9Q96BM1 317 aaPredicted RBP11.2□□□□□ -0.62
SOX2-OT-228ENST00000597828 WDR34Q96EX3 536 aa11.2□□□□□ -0.62
SOX2-OT-228ENST00000597828 PTCD3Q96EY7 689 aaKnown RBP11.2□□□□□ -0.62
SOX2-OT-228ENST00000597828 SMC6Q96SB8 1091 aa11.2□□□□□ -0.62
SOX2-OT-228ENST00000597828 GPR22Q99680 433 aa11.2□□□□□ -0.62
SOX2-OT-228ENST00000597828 EHD1Q9H4M9 534 aa11.2□□□□□ -0.62
SOX2-OT-228ENST00000597828 SAYSD1Q9NPB0 183 aa11.2□□□□□ -0.62
SOX2-OT-228ENST00000597828 SEMA4BQ9NPR2 832 aaPredicted RBP11.2□□□□□ -0.62
SOX2-OT-228ENST00000597828 NSMCE4AQ9NXX6 385 aa11.2□□□□□ -0.62
SOX2-OT-228ENST00000597828 TUBA8Q9NY65 449 aaPredicted RBP11.2□□□□□ -0.62
SOX2-OT-228ENST00000597828 VTI1BQ9UEU0 232 aa11.2□□□□□ -0.62
SOX2-OT-228ENST00000597828 TCRBV9S1A1TA0A576 114 aa11.19□□□□□ -0.62
SOX2-OT-228ENST00000597828 FGF17O60258 216 aa11.19□□□□□ -0.62
SOX2-OT-228ENST00000597828 ABCB7O75027 752 aa11.19□□□□□ -0.62
SOX2-OT-228ENST00000597828 TGFB1P01137 390 aa11.19□□□□□ -0.62
SOX2-OT-228ENST00000597828 PCNAP12004 261 aa11.19□□□□□ -0.62
SOX2-OT-228ENST00000597828 TNNI3P19429 210 aa11.19□□□□□ -0.62
SOX2-OT-228ENST00000597828 ENDOUP21128 410 aaKnown RBP11.19□□□□□ -0.62
SOX2-OT-228ENST00000597828 ATP5A1P25705 553 aaKnown RBP11.19□□□□□ -0.62
SOX2-OT-228ENST00000597828 RIPPLY3P57055 190 aa11.19□□□□□ -0.62
SOX2-OT-228ENST00000597828 IRF8Q02556 426 aa11.19□□□□□ -0.62
SOX2-OT-228ENST00000597828 EFTUD2Q15029 972 aaKnown RBP eCLIP11.19□□□□□ -0.62
SOX2-OT-228ENST00000597828 ZKSCAN8Q15776 578 aaPredicted RBP11.19□□□□□ -0.62
SOX2-OT-228ENST00000597828 GXYLT1Q4G148 440 aa11.19□□□□□ -0.62
SOX2-OT-228ENST00000597828 RTL6Q6ICC9 239 aa11.19□□□□□ -0.62
SOX2-OT-228ENST00000597828 TMEM211Q6ICI0 200 aa11.19□□□□□ -0.62
SOX2-OT-228ENST00000597828 SULT1C3Q6IMI6 304 aa11.19□□□□□ -0.62
SOX2-OT-228ENST00000597828 ZNF585AQ6P3V2 769 aa11.19□□□□□ -0.62
SOX2-OT-228ENST00000597828 RTL4Q6ZR62 310 aa11.19□□□□□ -0.62
SOX2-OT-228ENST00000597828 FAM47EQ6ZV65 393 aa11.19□□□□□ -0.62
SOX2-OT-228ENST00000597828 CMC1Q7Z7K0 106 aa11.19□□□□□ -0.62
SOX2-OT-228ENST00000597828 C9orf40Q8IXQ3 194 aa11.19□□□□□ -0.62
SOX2-OT-228ENST00000597828 GPALPP1Q8IXQ4 340 aa11.19□□□□□ -0.62
SOX2-OT-228ENST00000597828 ACOT4Q8N9L9 421 aa11.19□□□□□ -0.62
SOX2-OT-228ENST00000597828 MORN4Q8NDC4 146 aa11.19□□□□□ -0.62
SOX2-OT-228ENST00000597828 LILRB4Q8NHJ6 448 aa11.19□□□□□ -0.62
SOX2-OT-228ENST00000597828 ZNF473Q8WTR7 871 aaKnown RBP11.19□□□□□ -0.62
SOX2-OT-228ENST00000597828 ASB5Q8WWX0 329 aa11.19□□□□□ -0.62
SOX2-OT-228ENST00000597828 DAZLQ92904 295 aaKnown RBP11.19□□□□□ -0.62
SOX2-OT-228ENST00000597828 C16orf45Q96MC5 204 aaPredicted RBP11.19□□□□□ -0.62
SOX2-OT-228ENST00000597828 RUNDC3BQ96NL0 473 aa11.19□□□□□ -0.62
SOX2-OT-228ENST00000597828 KCNC2Q96PR1 638 aa11.19□□□□□ -0.62
SOX2-OT-228ENST00000597828 EFCAB11Q9BUY7 163 aa11.19□□□□□ -0.62
SOX2-OT-228ENST00000597828 CAPS2Q9BXY5 557 aa11.19□□□□□ -0.62
SOX2-OT-228ENST00000597828 PITHD1Q9GZP4 211 aaPredicted RBP11.19□□□□□ -0.62
SOX2-OT-228ENST00000597828 ALG9Q9H6U8 611 aa11.19□□□□□ -0.62
SOX2-OT-228ENST00000597828 CNOT10Q9H9A5 744 aaKnown RBP11.19□□□□□ -0.62
SOX2-OT-228ENST00000597828 PRM3Q9NNZ6 103 aa11.19□□□□□ -0.62
SOX2-OT-228ENST00000597828 RNF14Q9UBS8 474 aa11.19□□□□□ -0.62
SOX2-OT-228ENST00000597828 PTBP2Q9UKA9 531 aaKnown RBP11.19□□□□□ -0.62
SOX2-OT-228ENST00000597828 RNF112Q9ULX5 631 aa11.19□□□□□ -0.62
SOX2-OT-228ENST00000597828 ATG4BQ9Y4P1 393 aa11.19□□□□□ -0.62
SOX2-OT-228ENST00000597828 FAM215AQ9Y5M1 114 aa11.19□□□□□ -0.62
SOX2-OT-228ENST00000597828 ZFHX3Q15911 3703 aa11.19□□□□□ -0.62
SOX2-OT-228ENST00000597828 ATP6AP2A0A1C7CYW4 349 aa11.18□□□□□ -0.62
SOX2-OT-228ENST00000597828 SUPT3HB4E1H0 165 aa11.18□□□□□ -0.62
SOX2-OT-228ENST00000597828 CCDC188H7C350 402 aa11.18□□□□□ -0.62
SOX2-OT-228ENST00000597828 UBXN8O00124 270 aa11.18□□□□□ -0.62
SOX2-OT-228ENST00000597828 SUPT3HO75486 399 aa11.18□□□□□ -0.62
SOX2-OT-228ENST00000597828 ATP6AP2O75787 350 aa11.18□□□□□ -0.62
SOX2-OT-228ENST00000597828 LRATO95237 230 aa11.18□□□□□ -0.62
SOX2-OT-228ENST00000597828 IGHG3P01860 377 aa11.18□□□□□ -0.62
SOX2-OT-228ENST00000597828 STMN1P16949 149 aa11.18□□□□□ -0.62
SOX2-OT-228ENST00000597828 CAPN3P20807 821 aa11.18□□□□□ -0.62
SOX2-OT-228ENST00000597828 CNR1P21554 472 aa11.18□□□□□ -0.62
SOX2-OT-228ENST00000597828 CPN2P22792 545 aa11.18□□□□□ -0.62
SOX2-OT-228ENST00000597828 PIGAP37287 484 aa11.18□□□□□ -0.62
SOX2-OT-228ENST00000597828 SSR2P43308 183 aa11.18□□□□□ -0.62
SOX2-OT-228ENST00000597828 HNRNPH2P55795 449 aaKnown RBP11.18□□□□□ -0.62
SOX2-OT-228ENST00000597828 GPX6P59796 221 aa11.18□□□□□ -0.62
SOX2-OT-228ENST00000597828 FOXO1Q12778 655 aa11.18□□□□□ -0.62
SOX2-OT-228ENST00000597828 ASPHQ12797 758 aa11.18□□□□□ -0.62
SOX2-OT-228ENST00000597828 DDX39BQ13838 428 aaKnown RBP11.18□□□□□ -0.62
SOX2-OT-228ENST00000597828 SNTB1Q13884 538 aaKnown RBP11.18□□□□□ -0.62
SOX2-OT-228ENST00000597828 PRAMEF20Q5VT98 475 aa11.18□□□□□ -0.62
SOX2-OT-228ENST00000597828 C18orf63Q68DL7 685 aa11.18□□□□□ -0.62
SOX2-OT-228ENST00000597828 ADGRD1Q6QNK2 874 aa11.18□□□□□ -0.62
SOX2-OT-228ENST00000597828 GK5Q6ZS86 529 aa11.18□□□□□ -0.62
SOX2-OT-228ENST00000597828 TRILQ7L0X0 811 aa11.18□□□□□ -0.62
SOX2-OT-228ENST00000597828 LRRC70Q7Z2Q7 622 aa11.18□□□□□ -0.62
SOX2-OT-228ENST00000597828 SLC22A16Q86VW1 577 aa11.18□□□□□ -0.62
SOX2-OT-228ENST00000597828 TMEM200AQ86VY9 491 aa11.18□□□□□ -0.62
SOX2-OT-228ENST00000597828 LIX1LQ8IVB5 337 aa11.18□□□□□ -0.62
SOX2-OT-228ENST00000597828 DMRTC2Q8IXT2 367 aaPredicted RBP11.18□□□□□ -0.62
SOX2-OT-228ENST00000597828 FAM109AQ8N4B1 249 aa11.18□□□□□ -0.62
SOX2-OT-228ENST00000597828 KIF18AQ8NI77 898 aa11.18□□□□□ -0.62
SOX2-OT-228ENST00000597828 PYROXD1Q8WU10 500 aa11.18□□□□□ -0.62
SOX2-OT-228ENST00000597828 PPWD1Q96BP3 646 aaKnown RBP11.18□□□□□ -0.62
SOX2-OT-228ENST00000597828 TSPAN17Q96FV3 270 aa11.18□□□□□ -0.62
SOX2-OT-228ENST00000597828 CPNE1Q99829 537 aa11.18□□□□□ -0.62
SOX2-OT-228ENST00000597828 FAM173AQ9BQD7 235 aa11.18□□□□□ -0.62
SOX2-OT-228ENST00000597828 CNPPD1Q9BV87 410 aa11.18□□□□□ -0.62
SOX2-OT-228ENST00000597828 CD244Q9BZW8 370 aa11.18□□□□□ -0.62
SOX2-OT-228ENST00000597828 OR51B5Q9H339 312 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms