RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 IGLV3-21P80748 117 aaPredicted RBP10.42□□□□□ -0.74
VRK3-210ENST00000596121 TNFRSF17Q02223 184 aa10.42□□□□□ -0.74
VRK3-210ENST00000596121 BEND6Q5SZJ8 279 aaPredicted RBP10.42□□□□□ -0.74
VRK3-210ENST00000596121 CES4AQ5XG92 561 aa10.42□□□□□ -0.74
VRK3-210ENST00000596121 NUDT13Q86X67 352 aa10.42□□□□□ -0.74
VRK3-210ENST00000596121 CRLF3Q8IUI8 442 aa10.42□□□□□ -0.74
VRK3-210ENST00000596121 MMP21Q8N119 569 aa10.42□□□□□ -0.74
VRK3-210ENST00000596121 ZADH2Q8N4Q0 377 aa10.42□□□□□ -0.74
VRK3-210ENST00000596121 EFCAB3Q8N7B9 438 aa10.42□□□□□ -0.74
VRK3-210ENST00000596121 ZNF321PQ8N8H1 164 aa10.42□□□□□ -0.74
VRK3-210ENST00000596121 CCDC63Q8NA47 563 aa10.42□□□□□ -0.74
VRK3-210ENST00000596121 APCDD1LQ8NCL9 501 aa10.42□□□□□ -0.74
VRK3-210ENST00000596121 ADAMTS18Q8TE60 1221 aa10.42□□□□□ -0.74
VRK3-210ENST00000596121 DOK4Q8TEW6 326 aa10.42□□□□□ -0.74
VRK3-210ENST00000596121 PNPLA2Q96AD5 504 aa10.42□□□□□ -0.74
VRK3-210ENST00000596121 CCDC126Q96EE4 140 aa10.42□□□□□ -0.74
VRK3-210ENST00000596121 C19orf60Q96EN9 201 aa10.42□□□□□ -0.74
VRK3-210ENST00000596121 ALOXE3Q9BYJ1 711 aa10.42□□□□□ -0.74
VRK3-210ENST00000596121 SLC29A3Q9BZD2 475 aa10.42□□□□□ -0.74
VRK3-210ENST00000596121 ACPTQ9BZG2 426 aa10.42□□□□□ -0.74
VRK3-210ENST00000596121 KCNK13Q9HB14 408 aa10.42□□□□□ -0.74
VRK3-210ENST00000596121 MID1IP1Q9NPA3 183 aa10.42□□□□□ -0.74
VRK3-210ENST00000596121 TEX10Q9NXF1 929 aaPredicted RBP10.42□□□□□ -0.74
VRK3-210ENST00000596121 G3BP2Q9UN86 482 aaKnown RBP10.42□□□□□ -0.74
VRK3-210ENST00000596121 SNX6Q9UNH7 406 aa10.42□□□□□ -0.74
VRK3-210ENST00000596121 PPIEQ9UNP9 301 aaKnown RBP10.42□□□□□ -0.74
VRK3-210ENST00000596121 TENM4Q6N022 2769 aa10.42□□□□□ -0.74
VRK3-210ENST00000596121 PGRMC2O15173 223 aa10.41□□□□□ -0.74
VRK3-210ENST00000596121 PRKNO60260 465 aaPredicted RBP10.41□□□□□ -0.74
VRK3-210ENST00000596121 AIFM1O95831 613 aa10.41□□□□□ -0.74
VRK3-210ENST00000596121 TUBBP07437 444 aa10.41□□□□□ -0.74
VRK3-210ENST00000596121 HMGCS1Q01581 520 aa10.41□□□□□ -0.74
VRK3-210ENST00000596121 FOLH1Q04609 750 aa10.41□□□□□ -0.74
VRK3-210ENST00000596121 INPP5JQ15735 1006 aaPredicted RBP10.41□□□□□ -0.74
VRK3-210ENST00000596121 EXT1Q16394 746 aa10.41□□□□□ -0.74
VRK3-210ENST00000596121 ACER2Q5QJU3 275 aa10.41□□□□□ -0.74
VRK3-210ENST00000596121 CEP85LQ5SZL2 805 aa10.41□□□□□ -0.74
VRK3-210ENST00000596121 C10orf62Q5T681 223 aaPredicted RBP10.41□□□□□ -0.74
VRK3-210ENST00000596121 ZNF468Q5VIY5 522 aaPredicted RBP10.41□□□□□ -0.74
VRK3-210ENST00000596121 IRAK1BP1Q5VVH5 260 aa10.41□□□□□ -0.74
VRK3-210ENST00000596121 LIPMQ5VYY2 423 aa10.41□□□□□ -0.74
VRK3-210ENST00000596121 COMMD6Q7Z4G1 85 aa10.41□□□□□ -0.74
VRK3-210ENST00000596121 HPS6Q86YV9 775 aa10.41□□□□□ -0.74
VRK3-210ENST00000596121 C1orf52Q8N6N3 182 aaKnown RBP10.41□□□□□ -0.74
VRK3-210ENST00000596121 OR6Y1Q8NGX8 325 aa10.41□□□□□ -0.74
VRK3-210ENST00000596121 DNAJB14Q8TBM8 379 aa10.41□□□□□ -0.74
VRK3-210ENST00000596121 CHTF18Q8WVB6 975 aa10.41□□□□□ -0.74
VRK3-210ENST00000596121 SREK1Q8WXA9 508 aaKnown RBP10.41□□□□□ -0.74
VRK3-210ENST00000596121 PPWD1Q96BP3 646 aaKnown RBP10.41□□□□□ -0.74
VRK3-210ENST00000596121 TM4SF18Q96CE8 201 aa10.41□□□□□ -0.74
VRK3-210ENST00000596121 APIPQ96GX9 242 aa10.41□□□□□ -0.74
VRK3-210ENST00000596121 RPF2Q9H7B2 306 aaKnown RBP10.41□□□□□ -0.74
VRK3-210ENST00000596121 BRF2Q9HAW0 419 aa10.41□□□□□ -0.74
VRK3-210ENST00000596121 LYARQ9NX58 379 aaKnown RBP10.41□□□□□ -0.74
VRK3-210ENST00000596121 STMN3Q9NZ72 180 aa10.41□□□□□ -0.74
VRK3-210ENST00000596121 VTI1BQ9UEU0 232 aa10.41□□□□□ -0.74
VRK3-210ENST00000596121 B3GNT3Q9Y2A9 372 aa10.41□□□□□ -0.74
VRK3-210ENST00000596121 NTNG1Q9Y2I2 539 aa10.41□□□□□ -0.74
VRK3-210ENST00000596121 PCDHGA10Q9Y5H3 936 aa10.41□□□□□ -0.74
VRK3-210ENST00000596121 PTGDR2Q9Y5Y4 395 aa10.41□□□□□ -0.74
VRK3-210ENST00000596121 SHANK1Q9Y566 2161 aa10.41□□□□□ -0.74
VRK3-210ENST00000596121 TMEM200CA6NKL6 621 aa10.4□□□□□ -0.74
VRK3-210ENST00000596121 HRKO00198 91 aa10.4□□□□□ -0.74
VRK3-210ENST00000596121 RGS16O15492 202 aaPredicted RBP10.4□□□□□ -0.74
VRK3-210ENST00000596121 KLHL41O60662 606 aa10.4□□□□□ -0.74
VRK3-210ENST00000596121 TRIM13O60858 407 aa10.4□□□□□ -0.74
VRK3-210ENST00000596121 ULK1O75385 1050 aa10.4□□□□□ -0.74
VRK3-210ENST00000596121 DDAH2O95865 285 aa10.4□□□□□ -0.74
VRK3-210ENST00000596121 KRT6AP02538 564 aa10.4□□□□□ -0.74
VRK3-210ENST00000596121 KRT6BP04259 564 aa10.4□□□□□ -0.74
VRK3-210ENST00000596121 ENO1P06733 434 aaKnown RBP10.4□□□□□ -0.74
VRK3-210ENST00000596121 CHRNGP07510 517 aa10.4□□□□□ -0.74
VRK3-210ENST00000596121 HMOX2P30519 316 aa10.4□□□□□ -0.74
VRK3-210ENST00000596121 KRT6CP48668 564 aa10.4□□□□□ -0.74
VRK3-210ENST00000596121 FOXK1P85037 733 aa10.4□□□□□ -0.74
VRK3-210ENST00000596121 ZNF33BQ06732 778 aa10.4□□□□□ -0.74
VRK3-210ENST00000596121 RCN2Q14257 317 aa10.4□□□□□ -0.74
VRK3-210ENST00000596121 TERF2Q15554 542 aa10.4□□□□□ -0.74
VRK3-210ENST00000596121 ELAVL1Q15717 326 aaKnown RBP10.4□□□□□ -0.74
VRK3-210ENST00000596121 ZNF750Q32MQ0 723 aa10.4□□□□□ -0.74
VRK3-210ENST00000596121 CCNYL2Q5T2Q4 361 aa10.4□□□□□ -0.74
VRK3-210ENST00000596121 CLEC6AQ6EIG7 209 aa10.4□□□□□ -0.74
VRK3-210ENST00000596121 CYP20A1Q6UW02 462 aa10.4□□□□□ -0.74
VRK3-210ENST00000596121 C16orf47Q6ZP98 133 aaPredicted RBP10.4□□□□□ -0.74
VRK3-210ENST00000596121 ZCCHC23Q6ZST2 131 aa10.4□□□□□ -0.74
VRK3-210ENST00000596121 ZNF227Q86WZ6 799 aa10.4□□□□□ -0.74
VRK3-210ENST00000596121 BEST3Q8N1M1 668 aa10.4□□□□□ -0.74
VRK3-210ENST00000596121 CISD2Q8N5K1 135 aaKnown RBP10.4□□□□□ -0.74
VRK3-210ENST00000596121 B3GNT7Q8NFL0 401 aa10.4□□□□□ -0.74
VRK3-210ENST00000596121 HAS2Q92819 552 aa10.4□□□□□ -0.74
VRK3-210ENST00000596121 NCLNQ969V3 563 aa10.4□□□□□ -0.74
VRK3-210ENST00000596121 MIB2Q96AX9 1013 aa10.4□□□□□ -0.74
VRK3-210ENST00000596121 C11orf24Q96F05 449 aaPredicted RBP10.4□□□□□ -0.74
VRK3-210ENST00000596121 SMC6Q96SB8 1091 aa10.4□□□□□ -0.74
VRK3-210ENST00000596121 CENPKQ9BS16 269 aa10.4□□□□□ -0.74
VRK3-210ENST00000596121 CDCP1Q9H5V8 836 aa10.4□□□□□ -0.74
VRK3-210ENST00000596121 ADAP2Q9NPF8 381 aa10.4□□□□□ -0.74
VRK3-210ENST00000596121 MS4A12Q9NXJ0 267 aa10.4□□□□□ -0.74
VRK3-210ENST00000596121 VPS29Q9UBQ0 182 aa10.4□□□□□ -0.74
VRK3-210ENST00000596121 PHF11Q9UIL8 331 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms