RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 TOR1AIP1Q5JTV8 583 aa16.37■□□□□ 0.21
SHKBP1-203ENST00000594298 LIPJQ5W064 366 aa16.37■□□□□ 0.21
SHKBP1-203ENST00000594298 GTF2H2CQ6P1K8 395 aa16.37■□□□□ 0.21
SHKBP1-203ENST00000594298 MED27Q6P2C8 311 aa16.37■□□□□ 0.21
SHKBP1-203ENST00000594298 NCCRP1Q6ZVX7 275 aaPredicted RBP16.37■□□□□ 0.21
SHKBP1-203ENST00000594298 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.37■□□□□ 0.21
SHKBP1-203ENST00000594298 ATP6V1E2Q96A05 226 aa16.37■□□□□ 0.21
SHKBP1-203ENST00000594298 TMEM125Q96AQ2 219 aa16.37■□□□□ 0.21
SHKBP1-203ENST00000594298 REPS1Q96D71 796 aa16.37■□□□□ 0.21
SHKBP1-203ENST00000594298 PHF21BQ96EK2 531 aa16.37■□□□□ 0.21
SHKBP1-203ENST00000594298 TREX2Q9BQ50 279 aaPredicted RBP16.37■□□□□ 0.21
SHKBP1-203ENST00000594298 PARD6BQ9BYG5 372 aa16.37■□□□□ 0.21
SHKBP1-203ENST00000594298 ACTR8Q9H981 624 aa16.37■□□□□ 0.21
SHKBP1-203ENST00000594298 PRDM9Q9NQV7 894 aa16.37■□□□□ 0.21
SHKBP1-203ENST00000594298 ZNF490Q9ULM2 529 aaPredicted RBP16.37■□□□□ 0.21
SHKBP1-203ENST00000594298 KLF13Q9Y2Y9 288 aaPredicted RBP16.37■□□□□ 0.21
SHKBP1-203ENST00000594298 FCHO1O14526 889 aa16.36■□□□□ 0.21
SHKBP1-203ENST00000594298 NUDT17P0C025 328 aa16.36■□□□□ 0.21
SHKBP1-203ENST00000594298 SMIM10L1P0DMW3 83 aa16.36■□□□□ 0.21
SHKBP1-203ENST00000594298 SLCO1A2P46721 670 aa16.36■□□□□ 0.21
SHKBP1-203ENST00000594298 CCT5P48643 541 aa16.36■□□□□ 0.21
SHKBP1-203ENST00000594298 PHEXP78562 749 aa16.36■□□□□ 0.21
SHKBP1-203ENST00000594298 HYAL2Q12891 473 aa16.36■□□□□ 0.21
SHKBP1-203ENST00000594298 GRHL2Q6ISB3 625 aa16.36■□□□□ 0.21
SHKBP1-203ENST00000594298 CYP4X1Q8N118 509 aa16.36■□□□□ 0.21
SHKBP1-203ENST00000594298 RIBC1Q8N443 379 aaPredicted RBP16.36■□□□□ 0.21
SHKBP1-203ENST00000594298 SRFBP1Q8NEF9 429 aaKnown RBP16.36■□□□□ 0.21
SHKBP1-203ENST00000594298 MZB1Q8WU39 189 aa16.36■□□□□ 0.21
SHKBP1-203ENST00000594298 GAL3ST3Q96A11 431 aa16.36■□□□□ 0.21
SHKBP1-203ENST00000594298 SMIM10Q96HG1 83 aa16.36■□□□□ 0.21
SHKBP1-203ENST00000594298 ROPN1BQ9BZX4 212 aaPredicted RBP16.36■□□□□ 0.21
SHKBP1-203ENST00000594298 IPPKQ9H8X2 491 aa16.36■□□□□ 0.21
SHKBP1-203ENST00000594298 ROPN1Q9HAT0 212 aaPredicted RBP16.36■□□□□ 0.21
SHKBP1-203ENST00000594298 PCDHGA11Q9Y5H2 935 aa16.36■□□□□ 0.21
SHKBP1-203ENST00000594298 TLDC2A0PJX2 215 aa16.35■□□□□ 0.21
SHKBP1-203ENST00000594298 LRIT2A6NDA9 550 aa16.35■□□□□ 0.21
SHKBP1-203ENST00000594298 SMIM23A6NLE4 172 aa16.35■□□□□ 0.21
SHKBP1-203ENST00000594298 KLRC4-KLRK1H3BQV0 150 aa16.35■□□□□ 0.21
SHKBP1-203ENST00000594298 GOLGA8RI6L899 631 aa16.35■□□□□ 0.21
SHKBP1-203ENST00000594298 ZNHIT1O43257 154 aa16.35■□□□□ 0.21
SHKBP1-203ENST00000594298 PRAMEF4O60810 478 aa16.35■□□□□ 0.21
SHKBP1-203ENST00000594298 GLRA3O75311 464 aa16.35■□□□□ 0.21
SHKBP1-203ENST00000594298 RNH1P13489 461 aaKnown RBP16.35■□□□□ 0.21
SHKBP1-203ENST00000594298 MAOAP21397 527 aa16.35■□□□□ 0.21
SHKBP1-203ENST00000594298 PTGER1P34995 402 aa16.35■□□□□ 0.21
SHKBP1-203ENST00000594298 DEKP35659 375 aaKnown RBP16.35■□□□□ 0.21
SHKBP1-203ENST00000594298 KRTAP10-9P60411 292 aa16.35■□□□□ 0.21
SHKBP1-203ENST00000594298 RAB8AP61006 207 aa16.35■□□□□ 0.21
SHKBP1-203ENST00000594298 TERF2Q15554 542 aa16.35■□□□□ 0.21
SHKBP1-203ENST00000594298 TESK1Q15569 626 aa16.35■□□□□ 0.21
SHKBP1-203ENST00000594298 PRAMEF9Q5VWM5 478 aa16.35■□□□□ 0.21
SHKBP1-203ENST00000594298 TRIM40Q6P9F5 258 aa16.35■□□□□ 0.21
SHKBP1-203ENST00000594298 CHSY3Q70JA7 882 aa16.35■□□□□ 0.21
SHKBP1-203ENST00000594298 GOLGA7Q7Z5G4 137 aa16.35■□□□□ 0.21
SHKBP1-203ENST00000594298 MYLK4Q86YV6 388 aaPredicted RBP16.35■□□□□ 0.21
SHKBP1-203ENST00000594298 LAS2Q8IYD9 372 aa16.35■□□□□ 0.21
SHKBP1-203ENST00000594298 APCDD1LQ8NCL9 501 aa16.35■□□□□ 0.21
SHKBP1-203ENST00000594298 ARMC2Q8NEN0 867 aa16.35■□□□□ 0.21
SHKBP1-203ENST00000594298 C16orf52Q8NHV5 167 aa16.35■□□□□ 0.21
SHKBP1-203ENST00000594298 CA5BP1Q8WTZ4 195 aa16.35■□□□□ 0.21
SHKBP1-203ENST00000594298 DEFB126Q9BYW3 111 aa16.35■□□□□ 0.21
SHKBP1-203ENST00000594298 ROGDIQ9GZN7 287 aa16.35■□□□□ 0.21
SHKBP1-203ENST00000594298 REXO4Q9GZR2 422 aaKnown RBP16.35■□□□□ 0.21
SHKBP1-203ENST00000594298 KLHL31Q9H511 634 aa16.35■□□□□ 0.21
SHKBP1-203ENST00000594298 NECTIN3Q9NQS3 549 aa16.35■□□□□ 0.21
SHKBP1-203ENST00000594298 COQ3Q9NZJ6 369 aa16.35■□□□□ 0.21
SHKBP1-203ENST00000594298 TMEM216Q9P0N5 145 aa16.35■□□□□ 0.21
SHKBP1-203ENST00000594298 PPT2Q9UMR5 302 aa16.35■□□□□ 0.21
SHKBP1-203ENST00000594298 PPIEQ9UNP9 301 aaKnown RBP16.35■□□□□ 0.21
SHKBP1-203ENST00000594298 PSMD12O00232 456 aaPredicted RBP16.34■□□□□ 0.21
SHKBP1-203ENST00000594298 SIX3O95343 332 aaPredicted RBP16.34■□□□□ 0.21
SHKBP1-203ENST00000594298 CLDN9O95484 217 aa16.34■□□□□ 0.21
SHKBP1-203ENST00000594298 PCNAP12004 261 aa16.34■□□□□ 0.21
SHKBP1-203ENST00000594298 CD22P20273 847 aa16.34■□□□□ 0.21
SHKBP1-203ENST00000594298 PTGS2P35354 604 aa16.34■□□□□ 0.21
SHKBP1-203ENST00000594298 ARL1P40616 181 aaPredicted RBP16.34■□□□□ 0.21
SHKBP1-203ENST00000594298 MEOX1P50221 254 aa16.34■□□□□ 0.21
SHKBP1-203ENST00000594298 CCNG1P51959 295 aa16.34■□□□□ 0.21
SHKBP1-203ENST00000594298 TMEM35AQ53FP2 167 aa16.34■□□□□ 0.21
SHKBP1-203ENST00000594298 C3P1Q6ZMU1 363 aa16.34■□□□□ 0.21
SHKBP1-203ENST00000594298 SLC22A9Q8IVM8 553 aa16.34■□□□□ 0.21
SHKBP1-203ENST00000594298 SULF2Q8IWU5 870 aa16.34■□□□□ 0.21
SHKBP1-203ENST00000594298 B3GNT7Q8NFL0 401 aa16.34■□□□□ 0.21
SHKBP1-203ENST00000594298 OR2L5Q8NG80 312 aa16.34■□□□□ 0.21
SHKBP1-203ENST00000594298 OR7G3Q8NG95 312 aa16.34■□□□□ 0.21
SHKBP1-203ENST00000594298 FAM57AQ8TBR7 257 aa16.34■□□□□ 0.21
SHKBP1-203ENST00000594298 EPS8L3Q8TE67 593 aaKnown RBP16.34■□□□□ 0.21
SHKBP1-203ENST00000594298 CHTF18Q8WVB6 975 aa16.34■□□□□ 0.21
SHKBP1-203ENST00000594298 SDCCAG3Q96C92 435 aa16.34■□□□□ 0.21
SHKBP1-203ENST00000594298 MS4A6EQ96DS6 147 aa16.34■□□□□ 0.21
SHKBP1-203ENST00000594298 CMTM7Q96FZ5 175 aa16.34■□□□□ 0.21
SHKBP1-203ENST00000594298 CENPKQ9BS16 269 aa16.34■□□□□ 0.21
SHKBP1-203ENST00000594298 NPLQ9BXD5 320 aaPredicted RBP16.34■□□□□ 0.21
SHKBP1-203ENST00000594298 NOL11Q9H8H0 719 aaKnown RBP16.34■□□□□ 0.21
SHKBP1-203ENST00000594298 MCCC2Q9HCC0 563 aa16.34■□□□□ 0.21
SHKBP1-203ENST00000594298 ITGB1BP2Q9UKP3 347 aa16.34■□□□□ 0.21
SHKBP1-203ENST00000594298 RAB21Q9UL25 225 aa16.34■□□□□ 0.21
SHKBP1-203ENST00000594298 GRID1Q9ULK0 1009 aa16.34■□□□□ 0.21
SHKBP1-203ENST00000594298 TSC22D4Q9Y3Q8 395 aa16.34■□□□□ 0.21
SHKBP1-203ENST00000594298 MMACHCQ9Y4U1 282 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms