RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 CES1P1Q9UKY3 287 aa16.48■□□□□ 0.23
CXXC1-212ENST00000589940 PCDHGB4Q9UN71 923 aa16.48■□□□□ 0.23
CXXC1-212ENST00000589940 POMPQ9Y244 141 aa16.48■□□□□ 0.23
CXXC1-212ENST00000589940 HCN4Q9Y3Q4 1203 aa16.48■□□□□ 0.23
CXXC1-212ENST00000589940 A0A0A6YYC8 382 aaPredicted RBP16.47■□□□□ 0.23
CXXC1-212ENST00000589940 I3L1I5 382 aaPredicted RBP16.47■□□□□ 0.23
CXXC1-212ENST00000589940 NVLO15381 856 aaKnown RBP16.47■□□□□ 0.23
CXXC1-212ENST00000589940 RDH16O75452 317 aa16.47■□□□□ 0.23
CXXC1-212ENST00000589940 NSA2O95478 260 aaKnown RBP16.47■□□□□ 0.23
CXXC1-212ENST00000589940 LMNAP02545 664 aaKnown RBP16.47■□□□□ 0.23
CXXC1-212ENST00000589940 ZCCHC18P0CG32 403 aa16.47■□□□□ 0.23
CXXC1-212ENST00000589940 ITGA1P56199 1179 aa16.47■□□□□ 0.23
CXXC1-212ENST00000589940 HBA1P69905 142 aa16.47■□□□□ 0.23
CXXC1-212ENST00000589940 SPIDRQ14159 915 aa16.47■□□□□ 0.23
CXXC1-212ENST00000589940 FAM214AQ32MH5 1076 aa16.47■□□□□ 0.23
CXXC1-212ENST00000589940 C6orf163Q5TEZ5 329 aa16.47■□□□□ 0.23
CXXC1-212ENST00000589940 C1orf146Q5VVC0 180 aa16.47■□□□□ 0.23
CXXC1-212ENST00000589940 ZNF621Q6ZSS3 439 aa16.47■□□□□ 0.23
CXXC1-212ENST00000589940 GPR135Q8IZ08 494 aa16.47■□□□□ 0.23
CXXC1-212ENST00000589940 CA13Q8N1Q1 262 aa16.47■□□□□ 0.23
CXXC1-212ENST00000589940 ZNF501Q96CX3 271 aaPredicted RBP16.47■□□□□ 0.23
CXXC1-212ENST00000589940 ZBED6CLQ96FA7 236 aaPredicted RBP16.47■□□□□ 0.23
CXXC1-212ENST00000589940 PHF12Q96QT6 1004 aa16.47■□□□□ 0.23
CXXC1-212ENST00000589940 CSF3RQ99062 836 aa16.47■□□□□ 0.23
CXXC1-212ENST00000589940 SLAMF7Q9NQ25 335 aa16.47■□□□□ 0.23
CXXC1-212ENST00000589940 SERTAD3Q9UJW9 196 aa16.47■□□□□ 0.23
CXXC1-212ENST00000589940 ASCC3Q8N3C0 2202 aaKnown RBP16.47■□□□□ 0.23
CXXC1-212ENST00000589940 SPTBP11277 2137 aa16.47■□□□□ 0.23
CXXC1-212ENST00000589940 SELPLGQ14242 412 aa16.47■□□□□ 0.23
CXXC1-212ENST00000589940 TLDC1Q6P9B6 456 aa16.47■□□□□ 0.23
CXXC1-212ENST00000589940 WDR60Q8WVS4 1066 aa16.47■□□□□ 0.23
CXXC1-212ENST00000589940 AURKBQ96GD4 344 aaPredicted RBP16.47■□□□□ 0.23
CXXC1-212ENST00000589940 CPPED1Q9BRF8 314 aaPredicted RBP16.47■□□□□ 0.23
CXXC1-212ENST00000589940 ACSS1Q9NUB1 689 aaPredicted RBP16.47■□□□□ 0.23
CXXC1-212ENST00000589940 TAS2R9Q9NYW1 312 aa16.47■□□□□ 0.23
CXXC1-212ENST00000589940 SUCOQ9UBS9 1254 aaKnown RBP16.47■□□□□ 0.23
CXXC1-212ENST00000589940 ZNF282Q9UDV7 671 aaPredicted RBP16.47■□□□□ 0.23
CXXC1-212ENST00000589940 PSME2Q9UL46 239 aa16.47■□□□□ 0.23
CXXC1-212ENST00000589940 VPS4AQ9UN37 437 aa16.47■□□□□ 0.23
CXXC1-212ENST00000589940 WASHC1A8K0Z3 465 aa16.46■□□□□ 0.23
CXXC1-212ENST00000589940 HSD17B1P14061 328 aa16.46■□□□□ 0.23
CXXC1-212ENST00000589940 TCN1P20061 433 aaPredicted RBP16.46■□□□□ 0.23
CXXC1-212ENST00000589940 NBL1P41271 181 aa16.46■□□□□ 0.23
CXXC1-212ENST00000589940 EEFSECP57772 596 aaKnown RBP16.46■□□□□ 0.23
CXXC1-212ENST00000589940 ACY1Q03154 408 aa16.46■□□□□ 0.23
CXXC1-212ENST00000589940 OR52E8Q6IFG1 317 aa16.46■□□□□ 0.23
CXXC1-212ENST00000589940 DTWD1Q8N5C7 304 aa16.46■□□□□ 0.23
CXXC1-212ENST00000589940 FAM156AQ8NDB6 213 aa16.46■□□□□ 0.23
CXXC1-212ENST00000589940 OR5P2Q8WZ92 322 aa16.46■□□□□ 0.23
CXXC1-212ENST00000589940 THUMPD3Q9BV44 507 aaKnown RBP16.46■□□□□ 0.23
CXXC1-212ENST00000589940 ALG2Q9H553 416 aa16.46■□□□□ 0.23
CXXC1-212ENST00000589940 IKZF5Q9H5V7 419 aa16.46■□□□□ 0.23
CXXC1-212ENST00000589940 RPF2Q9H7B2 306 aaKnown RBP16.46■□□□□ 0.23
CXXC1-212ENST00000589940 PARD6AQ9NPB6 346 aa16.46■□□□□ 0.23
CXXC1-212ENST00000589940 CUTCQ9NTM9 273 aa16.46■□□□□ 0.23
CXXC1-212ENST00000589940 FAM86C1Q9NVL1 165 aa16.46■□□□□ 0.23
CXXC1-212ENST00000589940 AP3M1Q9Y2T2 418 aa16.46■□□□□ 0.23
CXXC1-212ENST00000589940 MUC6Q6W4X9 2439 aa16.46■□□□□ 0.23
CXXC1-212ENST00000589940 DNAJA2O60884 412 aa16.46■□□□□ 0.23
CXXC1-212ENST00000589940 CBFA2T3O75081 653 aa16.46■□□□□ 0.23
CXXC1-212ENST00000589940 ERAL1O75616 437 aaKnown RBP16.46■□□□□ 0.23
CXXC1-212ENST00000589940 ABCB1P08183 1280 aaPredicted RBP16.46■□□□□ 0.23
CXXC1-212ENST00000589940 NTSP30990 170 aa16.46■□□□□ 0.23
CXXC1-212ENST00000589940 GCGRP47871 477 aa16.46■□□□□ 0.23
CXXC1-212ENST00000589940 AVPR1BP47901 424 aa16.46■□□□□ 0.23
CXXC1-212ENST00000589940 MANFP55145 182 aaKnown RBP16.46■□□□□ 0.23
CXXC1-212ENST00000589940 LIPEQ05469 1076 aa16.46■□□□□ 0.23
CXXC1-212ENST00000589940 KPNB1Q14974 876 aaKnown RBP16.46■□□□□ 0.23
CXXC1-212ENST00000589940 PHF19Q5T6S3 580 aa16.46■□□□□ 0.23
CXXC1-212ENST00000589940 TRIML2Q8N7C3 387 aa16.46■□□□□ 0.23
CXXC1-212ENST00000589940 CLK4Q9HAZ1 481 aaKnown RBP16.46■□□□□ 0.23
CXXC1-212ENST00000589940 CLCA2Q9UQC9 943 aa16.46■□□□□ 0.23
CXXC1-212ENST00000589940 ENTPD4Q9Y227 616 aa16.46■□□□□ 0.23
CXXC1-212ENST00000589940 ADAMTS20P59510 1910 aa16.46■□□□□ 0.23
CXXC1-212ENST00000589940 H0YIG0 161 aa16.45■□□□□ 0.22
CXXC1-212ENST00000589940 CYR61O00622 381 aa16.45■□□□□ 0.22
CXXC1-212ENST00000589940 CHST10O43529 356 aa16.45■□□□□ 0.22
CXXC1-212ENST00000589940 MSX2P35548 267 aaPredicted RBP16.45■□□□□ 0.22
CXXC1-212ENST00000589940 RAB38P57729 211 aa16.45■□□□□ 0.22
CXXC1-212ENST00000589940 SHC2P98077 582 aa16.45■□□□□ 0.22
CXXC1-212ENST00000589940 GAB1Q13480 694 aa16.45■□□□□ 0.22
CXXC1-212ENST00000589940 TRA2AQ13595 282 aaKnown RBP eCLIP16.45■□□□□ 0.225e-7■□□□□ 10.9
CXXC1-212ENST00000589940 TRIM25Q14258 630 aaKnown RBP16.45■□□□□ 0.22
CXXC1-212ENST00000589940 MLC1Q15049 377 aa16.45■□□□□ 0.22
CXXC1-212ENST00000589940 CYB5D1Q6P9G0 228 aa16.45■□□□□ 0.22
CXXC1-212ENST00000589940 ASB9Q96DX5 294 aa16.45■□□□□ 0.22
CXXC1-212ENST00000589940 MVB12AQ96EY5 273 aa16.45■□□□□ 0.22
CXXC1-212ENST00000589940 CNRIP1Q96F85 164 aaPredicted RBP16.45■□□□□ 0.22
CXXC1-212ENST00000589940 BBS4Q96RK4 519 aa16.45■□□□□ 0.22
CXXC1-212ENST00000589940 ECSITQ9BQ95 431 aa16.45■□□□□ 0.22
CXXC1-212ENST00000589940 NEUROD4Q9HD90 331 aa16.45■□□□□ 0.22
CXXC1-212ENST00000589940 GIMAP4Q9NUV9 329 aa16.45■□□□□ 0.22
CXXC1-212ENST00000589940 C4orf47A7E2U8 309 aa16.45■□□□□ 0.22
CXXC1-212ENST00000589940 MYO1GB0I1T2 1018 aa16.45■□□□□ 0.22
CXXC1-212ENST00000589940 CLIC1O00299 241 aa16.45■□□□□ 0.22
CXXC1-212ENST00000589940 GSK3BP49841 420 aa16.45■□□□□ 0.22
CXXC1-212ENST00000589940 ACTR3P61158 418 aa16.45■□□□□ 0.22
CXXC1-212ENST00000589940 AASDHQ4L235 1098 aaPredicted RBP16.45■□□□□ 0.22
CXXC1-212ENST00000589940 YOD1Q5VVQ6 348 aaPredicted RBP16.45■□□□□ 0.22
CXXC1-212ENST00000589940 TTLL10Q6ZVT0 673 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms