RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 SRSF11Q05519 484 aaKnown RBP9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 IFT88Q13099 833 aa9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 CPSF6Q16630 551 aaKnown RBP eCLIP9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 UBAP2Q5T6F2 1119 aaKnown RBP9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 DEPDC1Q5TB30 811 aa9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 PRAMEF9Q5VWM5 478 aa9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 OR4C11Q6IEV9 310 aa9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 CYP20A1Q6UW02 462 aa9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 ZNF793Q6ZN11 406 aa9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 NUDT13Q86X67 352 aa9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 GPALPP1Q8IXQ4 340 aa9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 ZCCHC7Q8N3Z6 543 aaKnown RBP9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 TMEM156Q8N614 296 aa9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 L3MBTL4Q8NA19 623 aa9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 MORN4Q8NDC4 146 aa9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 NFAM1Q8NET5 270 aaPredicted RBP9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 UHMK1Q8TAS1 419 aaKnown RBP9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 NCLNQ969V3 563 aa9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 PHF21BQ96EK2 531 aa9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 SCMH1Q96GD3 660 aa9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 MAGED4Q96JG8 741 aa9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 ART5Q96L15 291 aa9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 GPR78Q96P69 363 aa9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 DGAT2Q96PD7 388 aa9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 TAAR6Q96RI8 345 aa9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 MTERF1Q99551 399 aaKnown RBP9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 SERPINI1Q99574 410 aa9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 PELOQ9BRX2 385 aaKnown RBP9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 PRDM7Q9NQW5 492 aa9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 KLHL1Q9NR64 748 aa9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 ANKRD10Q9NXR5 420 aa9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 PSMC3IPQ9P2W1 217 aaPredicted RBP9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 PPT2Q9UMR5 302 aa9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 KLF13Q9Y2Y9 288 aaPredicted RBP9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 SPG11Q96JI7 2443 aa9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 DNAJC13O75165 2243 aa9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 NCOA6Q14686 2063 aaPredicted RBP9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 ARHGAP10A1A4S6 786 aa9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 SAP18O00422 153 aaKnown RBP9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 RTCAO00442 366 aaKnown RBP9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 CYR61O00622 381 aa9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 RIPK2O43353 540 aa9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 NME2P1O60361 137 aa9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 SH3BGRLO75368 114 aa9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 SIX3O95343 332 aaPredicted RBP9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 SP1P08047 785 aa9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 RHOXF2BP0C7M4 288 aa9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 ZNF24P17028 368 aa9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 NME2P22392 152 aa9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 TRHRP34981 398 aaPredicted RBP9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 CD96P40200 585 aa9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 HLCSP50747 726 aa9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 SSR4P51571 173 aa9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 HNRNPFP52597 415 aaKnown RBP9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 RPS13P62277 151 aaKnown RBP9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 SLAMF1Q13291 335 aa9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 CUL3Q13618 768 aa9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 GGTA1PQ4G0N0 100 aa9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 C6orf163Q5TEZ5 329 aa9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 ZNF324BQ6AW86 544 aaPredicted RBP9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 SLC25A25Q6KCM7 469 aa9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 MTFR2Q6P444 385 aa9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 HSDL2Q6YN16 418 aa9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 PAGE2Q7Z2X7 111 aa9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 GPR180Q86V85 440 aa9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 CYP4Z2PQ8N1L4 340 aa9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 PLD6Q8N2A8 252 aaKnown RBP9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 POGLUT1Q8NBL1 392 aa9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 APCDD1LQ8NCL9 501 aa9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 TMEM52Q8NDY8 209 aa9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 SIGLEC12Q96PQ1 595 aa9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 NPAS2Q99743 824 aa9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 MAPKAP1Q9BPZ7 522 aa9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 RHOXF2Q9BQY4 288 aa9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 ALOXE3Q9BYJ1 711 aa9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 OR51B5Q9H339 312 aa9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 ELOVL6Q9H5J4 265 aa9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 RPF2Q9H7B2 306 aaKnown RBP9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 NOL11Q9H8H0 719 aaKnown RBP9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 PSD3Q9NYI0 1048 aa9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 AHSPQ9NZD4 102 aa9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 FETUBQ9UGM5 382 aa9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 PCTPQ9UKL6 214 aa9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 PPIEQ9UNP9 301 aaKnown RBP9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 STK38LQ9Y2H1 464 aa9.88□□□□□ -0.83
CLPTM1-211ENST00000589347 CACNA1CQ13936 2221 aa9.87□□□□□ -0.83
CLPTM1-211ENST00000589347 PHF3Q92576 2039 aaKnown RBP9.87□□□□□ -0.83
CLPTM1-211ENST00000589347 ASPDHA6ND91 283 aa9.87□□□□□ -0.83
CLPTM1-211ENST00000589347 A8MVJ9 347 aa9.87□□□□□ -0.83
CLPTM1-211ENST00000589347 C17orf105B2RV13 164 aa9.87□□□□□ -0.83
CLPTM1-211ENST00000589347 FOXE1O00358 373 aaPredicted RBP9.87□□□□□ -0.83
CLPTM1-211ENST00000589347 PLPP1O14494 284 aa9.87□□□□□ -0.83
CLPTM1-211ENST00000589347 LDB3O75112 727 aa9.87□□□□□ -0.83
CLPTM1-211ENST00000589347 ITGA10O75578 1167 aa9.87□□□□□ -0.83
CLPTM1-211ENST00000589347 SEMA3DO95025 777 aa9.87□□□□□ -0.83
CLPTM1-211ENST00000589347 UNC5CO95185 931 aa9.87□□□□□ -0.83
CLPTM1-211ENST00000589347 OTCP00480 354 aa9.87□□□□□ -0.83
CLPTM1-211ENST00000589347 RPS17P08708 135 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms