RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 TGFBR3LH3BV60 316 aa17.82■□□□□ 0.44
CLPTM1-209ENST00000588855 SDHDO14521 159 aa17.82■□□□□ 0.44
CLPTM1-209ENST00000588855 PRMT3O60678 531 aa17.82■□□□□ 0.44
CLPTM1-209ENST00000588855 MYO1DO94832 1006 aa17.82■□□□□ 0.44
CLPTM1-209ENST00000588855 CYC1P08574 325 aa17.82■□□□□ 0.44
CLPTM1-209ENST00000588855 IL3P08700 152 aa17.82■□□□□ 0.44
CLPTM1-209ENST00000588855 TLX1P31314 330 aaPredicted RBP17.82■□□□□ 0.44
CLPTM1-209ENST00000588855 HSD17B7P56937 341 aa17.82■□□□□ 0.44
CLPTM1-209ENST00000588855 ZNF763Q0D2J5 394 aa17.82■□□□□ 0.44
CLPTM1-209ENST00000588855 SLC13A2Q13183 592 aa17.82■□□□□ 0.44
CLPTM1-209ENST00000588855 ATP1A4Q13733 1029 aa17.82■□□□□ 0.44
CLPTM1-209ENST00000588855 C6orf136Q5SQH8 315 aa17.82■□□□□ 0.44
CLPTM1-209ENST00000588855 NDUFAF5Q5TEU4 345 aa17.82■□□□□ 0.44
CLPTM1-209ENST00000588855 VWA5B1Q5TIE3 1220 aa17.82■□□□□ 0.44
CLPTM1-209ENST00000588855 TMEM205Q6UW68 189 aa17.82■□□□□ 0.44
CLPTM1-209ENST00000588855 CDC26Q8NHZ8 85 aa17.82■□□□□ 0.44
CLPTM1-209ENST00000588855 C16orf78Q8WTQ4 265 aa17.82■□□□□ 0.44
CLPTM1-209ENST00000588855 RPF2Q9H7B2 306 aaKnown RBP17.82■□□□□ 0.44
CLPTM1-209ENST00000588855 CLDN16Q9Y5I7 305 aa17.82■□□□□ 0.44
CLPTM1-209ENST00000588855 EPG5Q9HCE0 2579 aa17.82■□□□□ 0.44
CLPTM1-209ENST00000588855 IGKV3D-11A0A0A0MRZ8 115 aa17.82■□□□□ 0.44
CLPTM1-209ENST00000588855 WASHC1A8K0Z3 465 aa17.82■□□□□ 0.44
CLPTM1-209ENST00000588855 CLDN4O14493 209 aa17.82■□□□□ 0.44
CLPTM1-209ENST00000588855 ZNF195O14628 629 aa17.82■□□□□ 0.44
CLPTM1-209ENST00000588855 LDB3O75112 727 aa17.82■□□□□ 0.44
CLPTM1-209ENST00000588855 TACR1P25103 407 aa17.82■□□□□ 0.44
CLPTM1-209ENST00000588855 MDH1P40925 334 aaKnown RBP17.82■□□□□ 0.44
CLPTM1-209ENST00000588855 TAS2R50P59544 299 aa17.82■□□□□ 0.44
CLPTM1-209ENST00000588855 TRA2BP62995 288 aaKnown RBP17.82■□□□□ 0.44
CLPTM1-209ENST00000588855 EEF1A2Q05639 463 aaKnown RBP17.82■□□□□ 0.44
CLPTM1-209ENST00000588855 NSDHLQ15738 373 aa17.82■□□□□ 0.44
CLPTM1-209ENST00000588855 KIRREL2Q6UWL6 708 aa17.82■□□□□ 0.44
CLPTM1-209ENST00000588855 FNDC5Q8NAU1 212 aa17.82■□□□□ 0.44
CLPTM1-209ENST00000588855 METTL21AQ8WXB1 218 aa17.82■□□□□ 0.44
CLPTM1-209ENST00000588855 C1orf50Q9BV19 199 aa17.82■□□□□ 0.44
CLPTM1-209ENST00000588855 AKTIPQ9H8T0 292 aa17.82■□□□□ 0.44
CLPTM1-209ENST00000588855 WDR41Q9HAD4 459 aa17.82■□□□□ 0.44
CLPTM1-209ENST00000588855 TMED5Q9Y3A6 229 aa17.82■□□□□ 0.44
CLPTM1-209ENST00000588855 USH1CQ9Y6N9 552 aa17.82■□□□□ 0.44
CLPTM1-209ENST00000588855 BLACEA4D250 179 aa17.81■□□□□ 0.44
CLPTM1-209ENST00000588855 TRPC5OSA6NMA1 111 aa17.81■□□□□ 0.44
CLPTM1-209ENST00000588855 PGRMC2O15173 223 aa17.81■□□□□ 0.44
CLPTM1-209ENST00000588855 FGF17O60258 216 aa17.81■□□□□ 0.44
CLPTM1-209ENST00000588855 EDF1O60869 148 aaKnown RBP17.81■□□□□ 0.44
CLPTM1-209ENST00000588855 GUCY1B2O75343 617 aa17.81■□□□□ 0.44
CLPTM1-209ENST00000588855 PRR35P0CG20 571 aa17.81■□□□□ 0.44
CLPTM1-209ENST00000588855 ACPPP15309 386 aa17.81■□□□□ 0.44
CLPTM1-209ENST00000588855 SDC1P18827 310 aa17.81■□□□□ 0.44
CLPTM1-209ENST00000588855 ID2Q02363 134 aa17.81■□□□□ 0.44
CLPTM1-209ENST00000588855 OR52E8Q6IFG1 317 aa17.81■□□□□ 0.44
CLPTM1-209ENST00000588855 ANKRD37Q7Z713 158 aa17.81■□□□□ 0.44
CLPTM1-209ENST00000588855 OR11G2Q8NGC1 345 aa17.81■□□□□ 0.44
CLPTM1-209ENST00000588855 NACC2Q96BF6 587 aa17.81■□□□□ 0.44
CLPTM1-209ENST00000588855 ANKRD9Q96BM1 317 aaPredicted RBP17.81■□□□□ 0.44
CLPTM1-209ENST00000588855 WDR55Q9H6Y2 383 aaPredicted RBP17.81■□□□□ 0.44
CLPTM1-209ENST00000588855 P4HTMQ9NXG6 502 aa17.81■□□□□ 0.44
CLPTM1-209ENST00000588855 C5AR2Q9P296 337 aa17.81■□□□□ 0.44
CLPTM1-209ENST00000588855 HEY2Q9UBP5 337 aa17.81■□□□□ 0.44
CLPTM1-209ENST00000588855 PCDHA9Q9Y5H5 950 aa17.81■□□□□ 0.44
CLPTM1-209ENST00000588855 CROCCQ5TZA2 2017 aa17.8■□□□□ 0.44
CLPTM1-209ENST00000588855 LOC102723996A0A087X1L8 192 aa17.8■□□□□ 0.44
CLPTM1-209ENST00000588855 IGHV3-20A0A0C4DH32 117 aa17.8■□□□□ 0.44
CLPTM1-209ENST00000588855 GOLGA8QA0A0J9YX86 632 aa17.8■□□□□ 0.44
CLPTM1-209ENST00000588855 MYOCOSA0A1B0GUC4 107 aa17.8■□□□□ 0.44
CLPTM1-209ENST00000588855 TCRBV16S1A1N1A0A5B0 115 aa17.8■□□□□ 0.44
CLPTM1-209ENST00000588855 GOLGA8OA6NCC3 632 aa17.8■□□□□ 0.44
CLPTM1-209ENST00000588855 GOLGA8NF8WBI6 632 aa17.8■□□□□ 0.44
CLPTM1-209ENST00000588855 CTNSO60931 367 aa17.8■□□□□ 0.44
CLPTM1-209ENST00000588855 EPHA3P29320 983 aa17.8■□□□□ 0.44
CLPTM1-209ENST00000588855 SLC9B1Q4ZJI4 515 aa17.8■□□□□ 0.44
CLPTM1-209ENST00000588855 C19orf48Q6RUI8 117 aa17.8■□□□□ 0.44
CLPTM1-209ENST00000588855 OR4N5Q8IXE1 308 aa17.8■□□□□ 0.44
CLPTM1-209ENST00000588855 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.8■□□□□ 0.44
CLPTM1-209ENST00000588855 DNAJB14Q8TBM8 379 aa17.8■□□□□ 0.44
CLPTM1-209ENST00000588855 SNRNP27Q8WVK2 155 aaKnown RBP17.8■□□□□ 0.44
CLPTM1-209ENST00000588855 THAP4Q8WY91 577 aa17.8■□□□□ 0.44
CLPTM1-209ENST00000588855 TANKQ92844 425 aa17.8■□□□□ 0.44
CLPTM1-209ENST00000588855 EGLN2Q96KS0 407 aa17.8■□□□□ 0.44
CLPTM1-209ENST00000588855 FAIM2Q9BWQ8 316 aa17.8■□□□□ 0.44
CLPTM1-209ENST00000588855 CCDC134Q9H6E4 229 aa17.8■□□□□ 0.44
CLPTM1-209ENST00000588855 MYNNQ9NPC7 610 aa17.8■□□□□ 0.44
CLPTM1-209ENST00000588855 POLHQ9Y253 713 aa17.8■□□□□ 0.44
CLPTM1-209ENST00000588855 MAN2B2Q9Y2E5 1009 aa17.8■□□□□ 0.44
CLPTM1-209ENST00000588855 NBEAQ8NFP9 2946 aa17.8■□□□□ 0.44
CLPTM1-209ENST00000588855 C1orf226A1L170 272 aa17.79■□□□□ 0.44
CLPTM1-209ENST00000588855 MASP2O00187 686 aa17.79■□□□□ 0.44
CLPTM1-209ENST00000588855 COX6A1P12074 109 aa17.79■□□□□ 0.44
CLPTM1-209ENST00000588855 BCKDHAP12694 445 aa17.79■□□□□ 0.44
CLPTM1-209ENST00000588855 PPP2R1BP30154 601 aa17.79■□□□□ 0.44
CLPTM1-209ENST00000588855 GSTM5P46439 218 aa17.79■□□□□ 0.44
CLPTM1-209ENST00000588855 ALDH9A1P49189 494 aa17.79■□□□□ 0.44
CLPTM1-209ENST00000588855 FOLH1Q04609 750 aa17.79■□□□□ 0.44
CLPTM1-209ENST00000588855 DEFB109BQ30KR1 87 aa17.79■□□□□ 0.44
CLPTM1-209ENST00000588855 SFT2D3Q587I9 215 aa17.79■□□□□ 0.44
CLPTM1-209ENST00000588855 LARP4Q71RC2 724 aaKnown RBP eCLIP17.79■□□□□ 0.44
CLPTM1-209ENST00000588855 TMEM132CQ8N3T6 1108 aa17.79■□□□□ 0.44
CLPTM1-209ENST00000588855 CLHC1Q8NHS4 586 aa17.79■□□□□ 0.44
CLPTM1-209ENST00000588855 IP6K3Q96PC2 410 aa17.79■□□□□ 0.44
CLPTM1-209ENST00000588855 TSSK3Q96PN8 268 aa17.79■□□□□ 0.44
CLPTM1-209ENST00000588855 C19orf25Q9UFG5 118 aaPredicted RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms