RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 C17orf105B2RV13 164 aa17.01■□□□□ 0.31
CCDC43-204ENST00000588687 LDB3O75112 727 aa17.01■□□□□ 0.31
CCDC43-204ENST00000588687 SCELO95171 688 aa17.01■□□□□ 0.31
CCDC43-204ENST00000588687 NADKO95544 446 aaPredicted RBP17.01■□□□□ 0.31
CCDC43-204ENST00000588687 IGKV3-11P04433 115 aa17.01■□□□□ 0.31
CCDC43-204ENST00000588687 IFNA16P05015 189 aa17.01■□□□□ 0.31
CCDC43-204ENST00000588687 NCF1P14598 390 aaPredicted RBP17.01■□□□□ 0.31
CCDC43-204ENST00000588687 HOXB4P17483 251 aaPredicted RBP17.01■□□□□ 0.31
CCDC43-204ENST00000588687 ZFP36L2P47974 494 aaKnown RBP17.01■□□□□ 0.31
CCDC43-204ENST00000588687 IGLV3-21P80748 117 aaPredicted RBP17.01■□□□□ 0.31
CCDC43-204ENST00000588687 MGAT5Q09328 741 aa17.01■□□□□ 0.31
CCDC43-204ENST00000588687 EFTUD2Q15029 972 aaKnown RBP eCLIP17.01■□□□□ 0.312e-8■■■■□ 22.7
CCDC43-204ENST00000588687 ZNF791Q3KP31 576 aaPredicted RBP17.01■□□□□ 0.31
CCDC43-204ENST00000588687 FBXO48Q5FWF7 155 aa17.01■□□□□ 0.31
CCDC43-204ENST00000588687 FAM47EQ6ZV65 393 aa17.01■□□□□ 0.31
CCDC43-204ENST00000588687 SEM1Q6ZVN7 128 aa17.01■□□□□ 0.31
CCDC43-204ENST00000588687 FRA10AC1Q70Z53 315 aa17.01■□□□□ 0.31
CCDC43-204ENST00000588687 SLC35F6Q8N357 371 aa17.01■□□□□ 0.31
CCDC43-204ENST00000588687 ANKRD9Q96BM1 317 aaPredicted RBP17.01■□□□□ 0.31
CCDC43-204ENST00000588687 F2RL3Q96RI0 385 aa17.01■□□□□ 0.31
CCDC43-204ENST00000588687 MAPKAP1Q9BPZ7 522 aa17.01■□□□□ 0.31
CCDC43-204ENST00000588687 CNPPD1Q9BV87 410 aa17.01■□□□□ 0.31
CCDC43-204ENST00000588687 DERL2Q9GZP9 239 aa17.01■□□□□ 0.31
CCDC43-204ENST00000588687 LIME1Q9H400 295 aa17.01■□□□□ 0.31
CCDC43-204ENST00000588687 RHOJQ9H4E5 214 aa17.01■□□□□ 0.31
CCDC43-204ENST00000588687 SACM1LQ9NTJ5 587 aa17.01■□□□□ 0.31
CCDC43-204ENST00000588687 ANKDD1BA6NHY2 528 aa17■□□□□ 0.31
CCDC43-204ENST00000588687 LRRC3CA6NJW4 275 aa17■□□□□ 0.31
CCDC43-204ENST00000588687 WDR1O75083 606 aa17■□□□□ 0.31
CCDC43-204ENST00000588687 H2AFYO75367 372 aaKnown RBP17■□□□□ 0.31
CCDC43-204ENST00000588687 ZWINTO95229 277 aa17■□□□□ 0.31
CCDC43-204ENST00000588687 KCNC1P48547 511 aa17■□□□□ 0.31
CCDC43-204ENST00000588687 DOC2AQ14183 400 aa17■□□□□ 0.31
CCDC43-204ENST00000588687 MPEG1Q2M385 716 aa17■□□□□ 0.31
CCDC43-204ENST00000588687 SLC25A35Q3KQZ1 300 aa17■□□□□ 0.31
CCDC43-204ENST00000588687 C1orf185Q5T7R7 199 aa17■□□□□ 0.31
CCDC43-204ENST00000588687 TGIF2LYQ8IUE0 185 aa17■□□□□ 0.31
CCDC43-204ENST00000588687 C9orf40Q8IXQ3 194 aa17■□□□□ 0.31
CCDC43-204ENST00000588687 ESAMQ96AP7 390 aa17■□□□□ 0.31
CCDC43-204ENST00000588687 PTCD3Q96EY7 689 aaKnown RBP17■□□□□ 0.31
CCDC43-204ENST00000588687 VPS39Q96JC1 886 aa17■□□□□ 0.31
CCDC43-204ENST00000588687 KCNC2Q96PR1 638 aa17■□□□□ 0.31
CCDC43-204ENST00000588687 MS4A8Q9BY19 250 aa17■□□□□ 0.31
CCDC43-204ENST00000588687 COPS7BQ9H9Q2 264 aaPredicted RBP17■□□□□ 0.31
CCDC43-204ENST00000588687 PROK2Q9HC23 129 aa17■□□□□ 0.31
CCDC43-204ENST00000588687 SMYD2Q9NRG4 433 aa17■□□□□ 0.31
CCDC43-204ENST00000588687 DNAJC11Q9NVH1 559 aa17■□□□□ 0.31
CCDC43-204ENST00000588687 ABCA2Q9BZC7 2435 aa17■□□□□ 0.31
CCDC43-204ENST00000588687 ATP6AP2A0A1C7CYW4 349 aa16.99■□□□□ 0.31
CCDC43-204ENST00000588687 E7ESA3 106 aa16.99■□□□□ 0.31
CCDC43-204ENST00000588687 FGF17O60258 216 aa16.99■□□□□ 0.31
CCDC43-204ENST00000588687 HCN1O60741 890 aa16.99■□□□□ 0.31
CCDC43-204ENST00000588687 ATP6AP2O75787 350 aa16.99■□□□□ 0.31
CCDC43-204ENST00000588687 SEC31AO94979 1220 aaKnown RBP16.99■□□□□ 0.31
CCDC43-204ENST00000588687 RFPL3SP0C7P2 107 aa16.99■□□□□ 0.31
CCDC43-204ENST00000588687 CD99P14209 185 aa16.99■□□□□ 0.31
CCDC43-204ENST00000588687 ATP5A1P25705 553 aaKnown RBP16.99■□□□□ 0.31
CCDC43-204ENST00000588687 HPDP32754 393 aaPredicted RBP16.99■□□□□ 0.31
CCDC43-204ENST00000588687 PIGAP37287 484 aa16.99■□□□□ 0.31
CCDC43-204ENST00000588687 MAN2A2P49641 1150 aa16.99■□□□□ 0.31
CCDC43-204ENST00000588687 ID2Q02363 134 aa16.99■□□□□ 0.31
CCDC43-204ENST00000588687 FOLH1Q04609 750 aa16.99■□□□□ 0.31
CCDC43-204ENST00000588687 STX4Q12846 297 aa16.99■□□□□ 0.31
CCDC43-204ENST00000588687 SERTAD2Q14140 314 aa16.99■□□□□ 0.31
CCDC43-204ENST00000588687 PIGGQ5H8A4 983 aa16.99■□□□□ 0.31
CCDC43-204ENST00000588687 RIPPLY2Q5TAB7 128 aa16.99■□□□□ 0.31
CCDC43-204ENST00000588687 OPN5Q6U736 354 aa16.99■□□□□ 0.31
CCDC43-204ENST00000588687 ANKMY2Q8IV38 441 aa16.99■□□□□ 0.31
CCDC43-204ENST00000588687 SPATA6LQ8N4H0 392 aa16.99■□□□□ 0.31
CCDC43-204ENST00000588687 RELL2Q8NC24 303 aaPredicted RBP16.99■□□□□ 0.31
CCDC43-204ENST00000588687 PDPRQ8NCN5 879 aa16.99■□□□□ 0.31
CCDC43-204ENST00000588687 OR10Q1Q8NGQ4 319 aa16.99■□□□□ 0.31
CCDC43-204ENST00000588687 NUBPLQ8TB37 319 aa16.99■□□□□ 0.31
CCDC43-204ENST00000588687 PAQR8Q8TEZ7 354 aa16.99■□□□□ 0.31
CCDC43-204ENST00000588687 KIAA1191Q96A73 305 aa16.99■□□□□ 0.31
CCDC43-204ENST00000588687 EFCAB11Q9BUY7 163 aa16.99■□□□□ 0.31
CCDC43-204ENST00000588687 CAPS2Q9BXY5 557 aa16.99■□□□□ 0.31
CCDC43-204ENST00000588687 DLL4Q9NR61 685 aa16.99■□□□□ 0.31
CCDC43-204ENST00000588687 CCM2LQ9NUG4 571 aaPredicted RBP16.99■□□□□ 0.31
CCDC43-204ENST00000588687 TRMT1Q9NXH9 659 aaKnown RBP16.99■□□□□ 0.31
CCDC43-204ENST00000588687 DNAJB12Q9NXW2 375 aaKnown RBP16.99■□□□□ 0.31
CCDC43-204ENST00000588687 ST6GALNAC2Q9UJ37 374 aa16.99■□□□□ 0.31
CCDC43-204ENST00000588687 HRKO00198 91 aa16.98■□□□□ 0.31
CCDC43-204ENST00000588687 RTCAO00442 366 aaKnown RBP16.98■□□□□ 0.31
CCDC43-204ENST00000588687 PIAS1O75925 651 aa16.98■□□□□ 0.31
CCDC43-204ENST00000588687 HSPA7P48741 367 aa16.98■□□□□ 0.31
CCDC43-204ENST00000588687 ASPHQ12797 758 aa16.98■□□□□ 0.31
CCDC43-204ENST00000588687 CBLBQ13191 982 aa16.98■□□□□ 0.31
CCDC43-204ENST00000588687 SNTB1Q13884 538 aaKnown RBP16.98■□□□□ 0.31
CCDC43-204ENST00000588687 RCN2Q14257 317 aa16.98■□□□□ 0.31
CCDC43-204ENST00000588687 OR4D1Q15615 310 aa16.98■□□□□ 0.31
CCDC43-204ENST00000588687 CDKL4Q5MAI5 379 aa16.98■□□□□ 0.31
CCDC43-204ENST00000588687 ARSKQ6UWY0 536 aa16.98■□□□□ 0.31
CCDC43-204ENST00000588687 DGAT2L6Q6ZPD8 337 aa16.98■□□□□ 0.31
CCDC43-204ENST00000588687 ZZZ3Q8IYH5 903 aa16.98■□□□□ 0.31
CCDC43-204ENST00000588687 LRRC25Q8N386 305 aaPredicted RBP16.98■□□□□ 0.31
CCDC43-204ENST00000588687 TCAIMQ8N3R3 496 aa16.98■□□□□ 0.31
CCDC43-204ENST00000588687 ACOT4Q8N9L9 421 aa16.98■□□□□ 0.31
CCDC43-204ENST00000588687 FBXO36Q8NEA4 188 aa16.98■□□□□ 0.31
CCDC43-204ENST00000588687 MYRIPQ8NFW9 859 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms