RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 C11orf24Q96F05 449 aaPredicted RBP18.93■□□□□ 0.62
DDX39A-207ENST00000588542 MYOCOSA0A1B0GUC4 107 aa18.92■□□□□ 0.62
DDX39A-207ENST00000588542 FGF4P08620 206 aa18.92■□□□□ 0.62
DDX39A-207ENST00000588542 ITGAMP11215 1152 aa18.92■□□□□ 0.62
DDX39A-207ENST00000588542 ICAM2P13598 275 aa18.92■□□□□ 0.62
DDX39A-207ENST00000588542 WDR4P57081 412 aaKnown RBP18.92■□□□□ 0.62
DDX39A-207ENST00000588542 RAE1P78406 368 aaKnown RBP18.92■□□□□ 0.62
DDX39A-207ENST00000588542 CCNYL2Q5T2Q4 361 aa18.92■□□□□ 0.62
DDX39A-207ENST00000588542 VWA5B1Q5TIE3 1220 aa18.92■□□□□ 0.62
DDX39A-207ENST00000588542 KANK2Q63ZY3 851 aa18.92■□□□□ 0.62
DDX39A-207ENST00000588542 RIPOR1Q6ZS17 1223 aa18.92■□□□□ 0.62
DDX39A-207ENST00000588542 ASB18Q6ZVZ8 466 aa18.92■□□□□ 0.62
DDX39A-207ENST00000588542 ANKRD42Q8N9B4 389 aa18.92■□□□□ 0.62
DDX39A-207ENST00000588542 NFAM1Q8NET5 270 aaPredicted RBP18.92■□□□□ 0.62
DDX39A-207ENST00000588542 APIPQ96GX9 242 aa18.92■□□□□ 0.62
DDX39A-207ENST00000588542 LPAR4Q99677 370 aa18.92■□□□□ 0.62
DDX39A-207ENST00000588542 RPF2Q9H7B2 306 aaKnown RBP18.92■□□□□ 0.62
DDX39A-207ENST00000588542 VIPAS39Q9H9C1 493 aa18.92■□□□□ 0.62
DDX39A-207ENST00000588542 TEX10Q9NXF1 929 aaPredicted RBP18.92■□□□□ 0.62
DDX39A-207ENST00000588542 CCL27Q9Y4X3 112 aa18.92■□□□□ 0.62
DDX39A-207ENST00000588542 PCDHGB7Q9Y5F8 929 aa18.92■□□□□ 0.62
DDX39A-207ENST00000588542 SPTA1P02549 2419 aa18.91■□□□□ 0.62
DDX39A-207ENST00000588542 SAGE2PA6NJ88 616 aa18.91■□□□□ 0.62
DDX39A-207ENST00000588542 WASHC1A8K0Z3 465 aa18.91■□□□□ 0.62
DDX39A-207ENST00000588542 A8MUA0 341 aa18.91■□□□□ 0.62
DDX39A-207ENST00000588542 TMEM233B4DJY2 109 aa18.91■□□□□ 0.62
DDX39A-207ENST00000588542 FGF17O60258 216 aa18.91■□□□□ 0.62
DDX39A-207ENST00000588542 AIFM1O95831 613 aa18.91■□□□□ 0.62
DDX39A-207ENST00000588542 BUD31P41223 144 aaPredicted RBP18.91■□□□□ 0.62
DDX39A-207ENST00000588542 SLC18A1P54219 525 aa18.91■□□□□ 0.62
DDX39A-207ENST00000588542 SLC26A5P58743 744 aa18.91■□□□□ 0.62
DDX39A-207ENST00000588542 IGLV3-21P80748 117 aaPredicted RBP18.91■□□□□ 0.62
DDX39A-207ENST00000588542 ID2Q02363 134 aa18.91■□□□□ 0.62
DDX39A-207ENST00000588542 CHI3L2Q15782 390 aa18.91■□□□□ 0.62
DDX39A-207ENST00000588542 BTBD16Q32M84 506 aa18.91■□□□□ 0.62
DDX39A-207ENST00000588542 UGT3A2Q3SY77 523 aa18.91■□□□□ 0.62
DDX39A-207ENST00000588542 RNF165Q6ZSG1 346 aa18.91■□□□□ 0.62
DDX39A-207ENST00000588542 ZNF843Q8N446 348 aa18.91■□□□□ 0.62
DDX39A-207ENST00000588542 M1APQ8TC57 530 aa18.91■□□□□ 0.62
DDX39A-207ENST00000588542 SH3GL2Q99962 352 aa18.91■□□□□ 0.62
DDX39A-207ENST00000588542 ALOXE3Q9BYJ1 711 aa18.91■□□□□ 0.62
DDX39A-207ENST00000588542 TUBB1Q9H4B7 451 aa18.91■□□□□ 0.62
DDX39A-207ENST00000588542 EML4Q9HC35 981 aaKnown RBP18.91■□□□□ 0.62
DDX39A-207ENST00000588542 ZBTB20Q9HC78 741 aaPredicted RBP18.91■□□□□ 0.62
DDX39A-207ENST00000588542 G3BP2Q9UN86 482 aaKnown RBP18.91■□□□□ 0.62
DDX39A-207ENST00000588542 FIS1Q9Y3D6 152 aa18.91■□□□□ 0.62
DDX39A-207ENST00000588542 ZNF451Q9Y4E5 1061 aa18.91■□□□□ 0.62
DDX39A-207ENST00000588542 TRAF6Q9Y4K3 522 aa18.91■□□□□ 0.62
DDX39A-207ENST00000588542 DNAJC15Q9Y5T4 150 aa18.91■□□□□ 0.62
DDX39A-207ENST00000588542 PTGDR2Q9Y5Y4 395 aa18.91■□□□□ 0.62
DDX39A-207ENST00000588542 GLOD5A6NK44 160 aa18.9■□□□□ 0.62
DDX39A-207ENST00000588542 PGRMC2O15173 223 aa18.9■□□□□ 0.62
DDX39A-207ENST00000588542 ITM2AO43736 263 aa18.9■□□□□ 0.62
DDX39A-207ENST00000588542 SERPINE1P05121 402 aa18.9■□□□□ 0.62
DDX39A-207ENST00000588542 NR2F6P10588 404 aa18.9■□□□□ 0.62
DDX39A-207ENST00000588542 TLX1P31314 330 aaPredicted RBP18.9■□□□□ 0.62
DDX39A-207ENST00000588542 MAPK12P53778 367 aa18.9■□□□□ 0.62
DDX39A-207ENST00000588542 BTKQ06187 659 aa18.9■□□□□ 0.62
DDX39A-207ENST00000588542 NFATC3Q12968 1075 aa18.9■□□□□ 0.62
DDX39A-207ENST00000588542 EXT1Q16394 746 aa18.9■□□□□ 0.62
DDX39A-207ENST00000588542 SPIN4Q56A73 249 aa18.9■□□□□ 0.62
DDX39A-207ENST00000588542 TTMPQ5BVD1 217 aa18.9■□□□□ 0.62
DDX39A-207ENST00000588542 OR4N5Q8IXE1 308 aa18.9■□□□□ 0.62
DDX39A-207ENST00000588542 CLYBLQ8N0X4 340 aa18.9■□□□□ 0.62
DDX39A-207ENST00000588542 BRIX1Q8TDN6 353 aaKnown RBP18.9■□□□□ 0.62
DDX39A-207ENST00000588542 TANKQ92844 425 aa18.9■□□□□ 0.62
DDX39A-207ENST00000588542 TM4SF18Q96CE8 201 aa18.9■□□□□ 0.62
DDX39A-207ENST00000588542 ZNF395Q9H8N7 513 aaPredicted RBP18.9■□□□□ 0.62
DDX39A-207ENST00000588542 PNO1Q9NRX1 252 aaKnown RBP18.9■□□□□ 0.62
DDX39A-207ENST00000588542 SIRT5Q9NXA8 310 aa18.9■□□□□ 0.62
DDX39A-207ENST00000588542 C5AR2Q9P296 337 aa18.9■□□□□ 0.62
DDX39A-207ENST00000588542 VTI1BQ9UEU0 232 aa18.9■□□□□ 0.62
DDX39A-207ENST00000588542 ZDHHC2Q9UIJ5 367 aa18.9■□□□□ 0.62
DDX39A-207ENST00000588542 MCM8Q9UJA3 840 aa18.9■□□□□ 0.62
DDX39A-207ENST00000588542 CNTRLQ7Z7A1 2325 aa18.89■□□□□ 0.61
DDX39A-207ENST00000588542 ARHGAP10A1A4S6 786 aa18.89■□□□□ 0.61
DDX39A-207ENST00000588542 SYNDIG1LA6NDD5 238 aa18.89■□□□□ 0.61
DDX39A-207ENST00000588542 KLHL41O60662 606 aa18.89■□□□□ 0.61
DDX39A-207ENST00000588542 LYPLA1O75608 230 aaPredicted RBP18.89■□□□□ 0.61
DDX39A-207ENST00000588542 SASH3O75995 380 aa18.89■□□□□ 0.61
DDX39A-207ENST00000588542 BGNP21810 368 aa18.89■□□□□ 0.61
DDX39A-207ENST00000588542 SOX11P35716 441 aa18.89■□□□□ 0.61
DDX39A-207ENST00000588542 FOLH1Q04609 750 aa18.89■□□□□ 0.61
DDX39A-207ENST00000588542 ACSM2AQ08AH3 577 aa18.89■□□□□ 0.61
DDX39A-207ENST00000588542 STX4Q12846 297 aa18.89■□□□□ 0.61
DDX39A-207ENST00000588542 SERTAD2Q14140 314 aa18.89■□□□□ 0.61
DDX39A-207ENST00000588542 TERF2Q15554 542 aa18.89■□□□□ 0.61
DDX39A-207ENST00000588542 SH2D4BQ5SQS7 431 aa18.89■□□□□ 0.61
DDX39A-207ENST00000588542 NDUFAF5Q5TEU4 345 aa18.89■□□□□ 0.61
DDX39A-207ENST00000588542 AGAP7PQ5VUJ5 663 aa18.89■□□□□ 0.61
DDX39A-207ENST00000588542 ACSM2BQ68CK6 577 aa18.89■□□□□ 0.61
DDX39A-207ENST00000588542 H3F3CQ6NXT2 135 aa18.89■□□□□ 0.61
DDX39A-207ENST00000588542 JMJD6Q6NYC1 403 aaPredicted RBP18.89■□□□□ 0.61
DDX39A-207ENST00000588542 GALNT18Q6P9A2 607 aa18.89■□□□□ 0.61
DDX39A-207ENST00000588542 IGFL2Q6UWQ7 119 aa18.89■□□□□ 0.61
DDX39A-207ENST00000588542 Q6ZSR9 355 aa18.89■□□□□ 0.61
DDX39A-207ENST00000588542 PTRH1Q86Y79 214 aaKnown RBP18.89■□□□□ 0.61
DDX39A-207ENST00000588542 SIRT6Q8N6T7 355 aa18.89■□□□□ 0.61
DDX39A-207ENST00000588542 PPP1R14CQ8TAE6 165 aa18.89■□□□□ 0.61
DDX39A-207ENST00000588542 DNAJB14Q8TBM8 379 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms