RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 UBQLNLQ8IYU4 475 aa17.71■□□□□ 0.43
DDX39A-206ENST00000587730 APOBEC4Q8WW27 367 aaKnown RBP17.71■□□□□ 0.43
DDX39A-206ENST00000587730 TMEM245Q9H330 911 aa17.71■□□□□ 0.43
DDX39A-206ENST00000587730 IL36AQ9UHA7 158 aa17.71■□□□□ 0.43
DDX39A-206ENST00000587730 SSR3Q9UNL2 185 aa17.71■□□□□ 0.43
DDX39A-206ENST00000587730 C17orf113A0A1B0GUU1 675 aa17.7■□□□□ 0.42
DDX39A-206ENST00000587730 HYKKA2RU49 373 aa17.7■□□□□ 0.42
DDX39A-206ENST00000587730 J3KTA2 159 aa17.7■□□□□ 0.42
DDX39A-206ENST00000587730 MMP20O60882 483 aa17.7■□□□□ 0.42
DDX39A-206ENST00000587730 SH3BGRLO75368 114 aa17.7■□□□□ 0.42
DDX39A-206ENST00000587730 GPX5O75715 221 aa17.7■□□□□ 0.42
DDX39A-206ENST00000587730 POU2F1P14859 743 aa17.7■□□□□ 0.42
DDX39A-206ENST00000587730 MMP12P39900 470 aa17.7■□□□□ 0.42
DDX39A-206ENST00000587730 RPS5P46782 204 aaKnown RBP17.7■□□□□ 0.42
DDX39A-206ENST00000587730 DGKGP49619 791 aa17.7■□□□□ 0.42
DDX39A-206ENST00000587730 MPEG1Q2M385 716 aa17.7■□□□□ 0.42
DDX39A-206ENST00000587730 ARMC4Q5T2S8 1044 aa17.7■□□□□ 0.42
DDX39A-206ENST00000587730 KIAA1211LQ6NV74 962 aa17.7■□□□□ 0.42
DDX39A-206ENST00000587730 CNKSR3Q6P9H4 555 aa17.7■□□□□ 0.42
DDX39A-206ENST00000587730 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.7■□□□□ 0.42
DDX39A-206ENST00000587730 ZNF765Q7L2R6 523 aa17.7■□□□□ 0.42
DDX39A-206ENST00000587730 KIAA0907Q7Z7F0 614 aaPredicted RBP17.7■□□□□ 0.42
DDX39A-206ENST00000587730 ROGDIQ9GZN7 287 aa17.7■□□□□ 0.42
DDX39A-206ENST00000587730 DPEP2Q9H4A9 486 aa17.7■□□□□ 0.42
DDX39A-206ENST00000587730 HHATLQ9HCP6 504 aa17.7■□□□□ 0.42
DDX39A-206ENST00000587730 FBXL12Q9NXK8 326 aa17.7■□□□□ 0.42
DDX39A-206ENST00000587730 TBC1D14Q9P2M4 693 aa17.7■□□□□ 0.42
DDX39A-206ENST00000587730 ACSL6Q9UKU0 697 aa17.7■□□□□ 0.42
DDX39A-206ENST00000587730 ENTPD6O75354 484 aa17.7■□□□□ 0.42
DDX39A-206ENST00000587730 TGFB1P01137 390 aa17.7■□□□□ 0.42
DDX39A-206ENST00000587730 IL1AP01583 271 aa17.7■□□□□ 0.42
DDX39A-206ENST00000587730 KLK1P06870 262 aa17.7■□□□□ 0.42
DDX39A-206ENST00000587730 H1F0P07305 194 aaKnown RBP17.7■□□□□ 0.42
DDX39A-206ENST00000587730 IL3P08700 152 aa17.7■□□□□ 0.42
DDX39A-206ENST00000587730 DDCP20711 480 aa17.7■□□□□ 0.42
DDX39A-206ENST00000587730 CXCR2P25025 360 aa17.7■□□□□ 0.42
DDX39A-206ENST00000587730 GANABQ14697 944 aaKnown RBP17.7■□□□□ 0.42
DDX39A-206ENST00000587730 SOWAHCQ53LP3 525 aaPredicted RBP17.7■□□□□ 0.42
DDX39A-206ENST00000587730 ARSIQ5FYB1 569 aa17.7■□□□□ 0.42
DDX39A-206ENST00000587730 MFSD4BQ5TF39 518 aa17.7■□□□□ 0.42
DDX39A-206ENST00000587730 CD300LDQ6UXZ3 194 aa17.7■□□□□ 0.42
DDX39A-206ENST00000587730 CEACAM20Q6UY09 585 aa17.7■□□□□ 0.42
DDX39A-206ENST00000587730 ADIPOR2Q86V24 386 aa17.7■□□□□ 0.42
DDX39A-206ENST00000587730 RAB43Q86YS6 212 aa17.7■□□□□ 0.42
DDX39A-206ENST00000587730 OR8H2Q8N162 312 aa17.7■□□□□ 0.42
DDX39A-206ENST00000587730 CLDN22Q8N7P3 220 aa17.7■□□□□ 0.42
DDX39A-206ENST00000587730 WDR48Q8TAF3 677 aa17.7■□□□□ 0.42
DDX39A-206ENST00000587730 IRF7Q92985 503 aa17.7■□□□□ 0.42
DDX39A-206ENST00000587730 SCLYQ96I15 445 aa17.7■□□□□ 0.42
DDX39A-206ENST00000587730 SLC46A2Q9BY10 475 aa17.7■□□□□ 0.42
DDX39A-206ENST00000587730 OR51B5Q9H339 312 aa17.7■□□□□ 0.42
DDX39A-206ENST00000587730 RNF167Q9H6Y7 350 aa17.7■□□□□ 0.42
DDX39A-206ENST00000587730 ZSCAN32Q9NX65 697 aa17.7■□□□□ 0.42
DDX39A-206ENST00000587730 REV1Q9UBZ9 1251 aa17.7■□□□□ 0.42
DDX39A-206ENST00000587730 A0A1W2PRU2 124 aa17.69■□□□□ 0.42
DDX39A-206ENST00000587730 SNTNA6NMZ2 147 aa17.69■□□□□ 0.42
DDX39A-206ENST00000587730 NEDD8-MDP1E9PL57 170 aa17.69■□□□□ 0.42
DDX39A-206ENST00000587730 POU1F1P28069 291 aa17.69■□□□□ 0.42
DDX39A-206ENST00000587730 HTR3AP46098 478 aa17.69■□□□□ 0.42
DDX39A-206ENST00000587730 XKP51811 444 aa17.69■□□□□ 0.42
DDX39A-206ENST00000587730 WDR5P61964 334 aaKnown RBP17.69■□□□□ 0.42
DDX39A-206ENST00000587730 MC1RQ01726 317 aa17.69■□□□□ 0.42
DDX39A-206ENST00000587730 TAP2Q03519 686 aa17.69■□□□□ 0.42
DDX39A-206ENST00000587730 SCN1BQ07699 218 aa17.69■□□□□ 0.42
DDX39A-206ENST00000587730 LRRC26Q2I0M4 334 aa17.69■□□□□ 0.42
DDX39A-206ENST00000587730 ASTLQ6HA08 431 aaPredicted RBP17.69■□□□□ 0.42
DDX39A-206ENST00000587730 LCTLQ6UWM7 567 aa17.69■□□□□ 0.42
DDX39A-206ENST00000587730 TMIGD1Q6UXZ0 262 aa17.69■□□□□ 0.42
DDX39A-206ENST00000587730 LIPIQ6XZB0 460 aa17.69■□□□□ 0.42
DDX39A-206ENST00000587730 TMEM25Q86YD3 366 aa17.69■□□□□ 0.42
DDX39A-206ENST00000587730 SLC34A3Q8N130 599 aa17.69■□□□□ 0.42
DDX39A-206ENST00000587730 NANOGP1Q8N7R0 232 aa17.69■□□□□ 0.42
DDX39A-206ENST00000587730 KIAA1143Q96AT1 154 aaPredicted RBP17.69■□□□□ 0.42
DDX39A-206ENST00000587730 LINC00615Q96LM1 132 aaPredicted RBP17.69■□□□□ 0.42
DDX39A-206ENST00000587730 ZNF354BQ96LW1 612 aa17.69■□□□□ 0.42
DDX39A-206ENST00000587730 OR2A14Q96R47 310 aa17.69■□□□□ 0.42
DDX39A-206ENST00000587730 SDHCQ99643 169 aaPredicted RBP17.69■□□□□ 0.42
DDX39A-206ENST00000587730 CNPPD1Q9BV87 410 aa17.69■□□□□ 0.42
DDX39A-206ENST00000587730 SLC6A16Q9GZN6 736 aa17.69■□□□□ 0.42
DDX39A-206ENST00000587730 PITHD1Q9GZP4 211 aaPredicted RBP17.69■□□□□ 0.42
DDX39A-206ENST00000587730 EXOSC4Q9NPD3 245 aaKnown RBP17.69■□□□□ 0.42
DDX39A-206ENST00000587730 ACAD8Q9UKU7 415 aa17.69■□□□□ 0.42
DDX39A-206ENST00000587730 MYL12BO14950 172 aa17.68■□□□□ 0.42
DDX39A-206ENST00000587730 IDH3BO43837 385 aa17.68■□□□□ 0.42
DDX39A-206ENST00000587730 MFN2O95140 757 aa17.68■□□□□ 0.42
DDX39A-206ENST00000587730 DDOSTP39656 456 aa17.68■□□□□ 0.42
DDX39A-206ENST00000587730 HEPACAMQ14CZ8 416 aa17.68■□□□□ 0.42
DDX39A-206ENST00000587730 ZNF648Q5T619 568 aaPredicted RBP17.68■□□□□ 0.42
DDX39A-206ENST00000587730 FBXO46Q6PJ61 603 aaPredicted RBP17.68■□□□□ 0.42
DDX39A-206ENST00000587730 SLC9B2Q86UD5 537 aa17.68■□□□□ 0.42
DDX39A-206ENST00000587730 LRRC56Q8IYG6 542 aaPredicted RBP17.68■□□□□ 0.42
DDX39A-206ENST00000587730 FAM26EQ8N5C1 309 aa17.68■□□□□ 0.42
DDX39A-206ENST00000587730 OR5AK3PQ8NH89 298 aa17.68■□□□□ 0.42
DDX39A-206ENST00000587730 KCNS3Q9BQ31 491 aa17.68■□□□□ 0.42
DDX39A-206ENST00000587730 POLR2J3Q9H1A7 115 aaKnown RBP17.68■□□□□ 0.42
DDX39A-206ENST00000587730 TRIM39Q9HCM9 518 aa17.68■□□□□ 0.42
DDX39A-206ENST00000587730 ISYNA1Q9NPH2 558 aa17.68■□□□□ 0.42
DDX39A-206ENST00000587730 TAAR2Q9P1P5 351 aa17.68■□□□□ 0.42
DDX39A-206ENST00000587730 DIMT1Q9UNQ2 313 aaKnown RBP17.68■□□□□ 0.42
DDX39A-206ENST00000587730 CMAHPQ9Y471 501 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms