RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 KCNC2Q96PR1 638 aa12.98□□□□□ -0.33
ATG4D-206ENST00000586863 CPNE1Q99829 537 aa12.98□□□□□ -0.33
ATG4D-206ENST00000586863 TTTY12Q9BZ98 90 aa12.98□□□□□ -0.33
ATG4D-206ENST00000586863 UCK2Q9BZX2 261 aa12.98□□□□□ -0.33
ATG4D-206ENST00000586863 DPH5Q9H2P9 285 aa12.98□□□□□ -0.33
ATG4D-206ENST00000586863 ZDHHC11Q9H8X9 412 aa12.98□□□□□ -0.33
ATG4D-206ENST00000586863 MCCC2Q9HCC0 563 aa12.98□□□□□ -0.33
ATG4D-206ENST00000586863 LYRM4Q9HD34 91 aa12.98□□□□□ -0.33
ATG4D-206ENST00000586863 TXNDC16Q9P2K2 825 aa12.98□□□□□ -0.33
ATG4D-206ENST00000586863 RNF6Q9Y252 685 aa12.98□□□□□ -0.33
ATG4D-206ENST00000586863 ABCA4P78363 2273 aa12.97□□□□□ -0.33
ATG4D-206ENST00000586863 SYNDIG1LA6NDD5 238 aa12.97□□□□□ -0.33
ATG4D-206ENST00000586863 FAM159BA6NKW6 160 aa12.97□□□□□ -0.33
ATG4D-206ENST00000586863 NPIPA2E9PIF3 369 aa12.97□□□□□ -0.33
ATG4D-206ENST00000586863 NPIPA3F8WFD2 350 aa12.97□□□□□ -0.33
ATG4D-206ENST00000586863 ACOT7O00154 380 aa12.97□□□□□ -0.33
ATG4D-206ENST00000586863 SCELO95171 688 aa12.97□□□□□ -0.33
ATG4D-206ENST00000586863 ETHE1O95571 254 aa12.97□□□□□ -0.33
ATG4D-206ENST00000586863 ATP5A1P25705 553 aaKnown RBP12.97□□□□□ -0.33
ATG4D-206ENST00000586863 CHRNB4P30926 498 aa12.97□□□□□ -0.33
ATG4D-206ENST00000586863 GP5P40197 560 aa12.97□□□□□ -0.33
ATG4D-206ENST00000586863 RAB10P61026 200 aa12.97□□□□□ -0.33
ATG4D-206ENST00000586863 RNF4P78317 190 aa12.97□□□□□ -0.33
ATG4D-206ENST00000586863 ILF2Q12905 390 aaKnown RBP12.97□□□□□ -0.33
ATG4D-206ENST00000586863 DLG1Q12959 904 aa12.97□□□□□ -0.33
ATG4D-206ENST00000586863 E2F2Q14209 437 aa12.97□□□□□ -0.33
ATG4D-206ENST00000586863 TBCCQ15814 346 aa12.97□□□□□ -0.33
ATG4D-206ENST00000586863 PAGE2BQ5JRK9 111 aa12.97□□□□□ -0.33
ATG4D-206ENST00000586863 TMEM211Q6ICI0 200 aa12.97□□□□□ -0.33
ATG4D-206ENST00000586863 LRRC70Q7Z2Q7 622 aa12.97□□□□□ -0.33
ATG4D-206ENST00000586863 CDH24Q86UP0 819 aa12.97□□□□□ -0.33
ATG4D-206ENST00000586863 CCDC71Q8IV32 467 aaPredicted RBP12.97□□□□□ -0.33
ATG4D-206ENST00000586863 ACOT4Q8N9L9 421 aa12.97□□□□□ -0.33
ATG4D-206ENST00000586863 ASB5Q8WWX0 329 aa12.97□□□□□ -0.33
ATG4D-206ENST00000586863 KIAA1191Q96A73 305 aa12.97□□□□□ -0.33
ATG4D-206ENST00000586863 ANKRD9Q96BM1 317 aaPredicted RBP12.97□□□□□ -0.33
ATG4D-206ENST00000586863 ALG9Q9H6U8 611 aa12.97□□□□□ -0.33
ATG4D-206ENST00000586863 RNF112Q9ULX5 631 aa12.97□□□□□ -0.33
ATG4D-206ENST00000586863 ARHGAP21Q5T5U3 1957 aa12.97□□□□□ -0.33
ATG4D-206ENST00000586863 ACANP16112 2415 aa12.97□□□□□ -0.33
ATG4D-206ENST00000586863 SAP18O00422 153 aaKnown RBP12.96□□□□□ -0.33
ATG4D-206ENST00000586863 FAM155BO75949 473 aa12.96□□□□□ -0.33
ATG4D-206ENST00000586863 URI1O94763 535 aaPredicted RBP12.96□□□□□ -0.33
ATG4D-206ENST00000586863 CCL3P10147 92 aa12.96□□□□□ -0.33
ATG4D-206ENST00000586863 PCNAP12004 261 aa12.96□□□□□ -0.33
ATG4D-206ENST00000586863 TNNI3P19429 210 aa12.96□□□□□ -0.33
ATG4D-206ENST00000586863 HIST1H1TP22492 207 aaPredicted RBP12.96□□□□□ -0.33
ATG4D-206ENST00000586863 CASP2P42575 452 aa12.96□□□□□ -0.33
ATG4D-206ENST00000586863 NUP107P57740 925 aa12.96□□□□□ -0.33
ATG4D-206ENST00000586863 GPX6P59796 221 aa12.96□□□□□ -0.33
ATG4D-206ENST00000586863 CKAP4Q07065 602 aaKnown RBP12.96□□□□□ -0.33
ATG4D-206ENST00000586863 LAPTM5Q13571 262 aa12.96□□□□□ -0.33
ATG4D-206ENST00000586863 SERTAD2Q14140 314 aa12.96□□□□□ -0.33
ATG4D-206ENST00000586863 TESK1Q15569 626 aa12.96□□□□□ -0.33
ATG4D-206ENST00000586863 RTL4Q6ZR62 310 aa12.96□□□□□ -0.33
ATG4D-206ENST00000586863 GK5Q6ZS86 529 aa12.96□□□□□ -0.33
ATG4D-206ENST00000586863 CMC1Q7Z7K0 106 aa12.96□□□□□ -0.33
ATG4D-206ENST00000586863 SLC22A16Q86VW1 577 aa12.96□□□□□ -0.33
ATG4D-206ENST00000586863 RNF175Q8N4F7 328 aa12.96□□□□□ -0.33
ATG4D-206ENST00000586863 TMEM251Q8N6I4 163 aa12.96□□□□□ -0.33
ATG4D-206ENST00000586863 BBOF1Q8ND07 529 aa12.96□□□□□ -0.33
ATG4D-206ENST00000586863 OR5M9Q8NGP3 310 aa12.96□□□□□ -0.33
ATG4D-206ENST00000586863 OR8K3Q8NH51 312 aa12.96□□□□□ -0.33
ATG4D-206ENST00000586863 LILRB4Q8NHJ6 448 aa12.96□□□□□ -0.33
ATG4D-206ENST00000586863 ZNF721Q8TF20 911 aa12.96□□□□□ -0.33
ATG4D-206ENST00000586863 RND1Q92730 232 aa12.96□□□□□ -0.33
ATG4D-206ENST00000586863 SMC6Q96SB8 1091 aa12.96□□□□□ -0.33
ATG4D-206ENST00000586863 ERP44Q9BS26 406 aa12.96□□□□□ -0.33
ATG4D-206ENST00000586863 TBCDQ9BTW9 1192 aa12.96□□□□□ -0.33
ATG4D-206ENST00000586863 SORBS1Q9BX66 1292 aaKnown RBP12.96□□□□□ -0.33
ATG4D-206ENST00000586863 CD244Q9BZW8 370 aa12.96□□□□□ -0.33
ATG4D-206ENST00000586863 ROGDIQ9GZN7 287 aa12.96□□□□□ -0.33
ATG4D-206ENST00000586863 PNPLA3Q9NST1 481 aa12.96□□□□□ -0.33
ATG4D-206ENST00000586863 GRHL1Q9NZI5 618 aa12.96□□□□□ -0.33
ATG4D-206ENST00000586863 WHRNQ9P202 907 aa12.96□□□□□ -0.33
ATG4D-206ENST00000586863 MED12Q93074 2177 aa12.96□□□□□ -0.34
ATG4D-206ENST00000586863 HRNRQ86YZ3 2850 aaPredicted RBP12.95□□□□□ -0.34
ATG4D-206ENST00000586863 UBXN8O00124 270 aa12.95□□□□□ -0.34
ATG4D-206ENST00000586863 EIF3HO15372 352 aaKnown RBP eCLIP12.95□□□□□ -0.34
ATG4D-206ENST00000586863 RAD51CO43502 376 aa12.95□□□□□ -0.34
ATG4D-206ENST00000586863 FGF17O60258 216 aa12.95□□□□□ -0.34
ATG4D-206ENST00000586863 TOXO94900 526 aa12.95□□□□□ -0.34
ATG4D-206ENST00000586863 TGFB1P01137 390 aa12.95□□□□□ -0.34
ATG4D-206ENST00000586863 IGHG3P01860 377 aa12.95□□□□□ -0.34
ATG4D-206ENST00000586863 S100BP04271 92 aaPredicted RBP12.95□□□□□ -0.34
ATG4D-206ENST00000586863 CELA3AP09093 270 aa12.95□□□□□ -0.34
ATG4D-206ENST00000586863 SLC35E2BP0CK96 405 aa12.95□□□□□ -0.34
ATG4D-206ENST00000586863 CAPN3P20807 821 aa12.95□□□□□ -0.34
ATG4D-206ENST00000586863 CPN2P22792 545 aa12.95□□□□□ -0.34
ATG4D-206ENST00000586863 MSX1P28360 303 aa12.95□□□□□ -0.34
ATG4D-206ENST00000586863 SSR2P43308 183 aa12.95□□□□□ -0.34
ATG4D-206ENST00000586863 MAGEA5P43359 124 aa12.95□□□□□ -0.34
ATG4D-206ENST00000586863 DNASE1L1P49184 302 aa12.95□□□□□ -0.34
ATG4D-206ENST00000586863 PMPCAQ10713 525 aa12.95□□□□□ -0.34
ATG4D-206ENST00000586863 FOXO1Q12778 655 aa12.95□□□□□ -0.34
ATG4D-206ENST00000586863 CALCOCO2Q13137 446 aa12.95□□□□□ -0.34
ATG4D-206ENST00000586863 SLMAPQ14BN4 828 aa12.95□□□□□ -0.34
ATG4D-206ENST00000586863 HIST2H2ACQ16777 129 aaPredicted RBP12.95□□□□□ -0.34
ATG4D-206ENST00000586863 GXYLT1Q4G148 440 aa12.95□□□□□ -0.34
ATG4D-206ENST00000586863 TMEM35AQ53FP2 167 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms