RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, human

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF540-204	ENST00000586792	INSC	Q1MX18	579 aa		4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	C14orf28	Q4W4Y0	310 aa		4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	SIRPB2	Q5JXA9	342 aa		4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	ANKRD20A2	Q5SQ80	823 aa		4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	ANKRD20A1	Q5TYW2	823 aa		4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	ANKRD20A3	Q5VUR7	823 aa		4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	GUSBP11	Q6P575	273 aa		4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	CCNI2	Q6ZMN8	369 aa	Predicted RBP	4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	MEX3B	Q6ZN04	569 aa	Known RBP	4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	RBM44	Q6ZP01	1051 aa	Known RBP	4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792		Q6ZTC4	211 aa		4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	H1FNT	Q75WM6	255 aa	Predicted RBP	4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	TMEM139	Q8IV31	216 aa		4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	LRRC8A	Q8IWT6	810 aa		4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	SLC35F3	Q8IY50	421 aa		4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	LSMEM2	Q8N112	164 aa		4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	ZNF567	Q8N184	647 aa		4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	TRAM1L1	Q8N609	369 aa		4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	LRRC57	Q8N9N7	239 aa		4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	FAM71D	Q8N9W8	422 aa		4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	GLIS1	Q8NBF1	620 aa		4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	OR56B2P	Q8NGI1	322 aa		4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	OR52K1	Q8NGK4	314 aa		4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	NFKBID	Q8NI38	313 aa		4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	METTL6	Q8TCB7	284 aa		4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	BRIX1	Q8TDN6	353 aa	Known RBP	4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	GRAMD1A	Q96CP6	724 aa		4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	REPS1	Q96D71	796 aa		4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	SPATA13	Q96N96	652 aa		4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	FCRL5	Q96RD9	977 aa		4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	GFM1	Q96RP9	751 aa	Known RBP	4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	FICD	Q9BVA6	458 aa		4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	TLR10	Q9BXR5	811 aa		4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	SLC7A5P2	Q9GIP4	190 aa		4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	CLPB	Q9H078	707 aa		4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	OSGEPL1	Q9H4B0	414 aa		4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	CHODL	Q9H9P2	273 aa		4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	BRF2	Q9HAW0	419 aa		4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	SNX15	Q9NRS6	342 aa		4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	C5AR2	Q9P296	337 aa		4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	DNAJB9	Q9UBS3	223 aa		4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	TRIM10	Q9UDY6	481 aa		4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	ZNF148	Q9UQR1	794 aa		4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	LIPT1	Q9Y234	373 aa		4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	LRRK1	Q38SD2	2015 aa		4.51	□□□□□ -1.69
ZNF540-204	ENST00000586792	LRP4	O75096	1905 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	CACNA1E	Q15878	2313 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	DCHS1	Q96JQ0	3298 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	GLYATL1P3	A0A0U1RQE8	302 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792		A0A0U1RQS6	177 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	EME2	A4GXA9	379 aa	Predicted RBP	4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	TRABD2B	A6NFA1	517 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	PDZK1P1	A8MUH7	402 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	TMX2-CTNND1	H3BSU7	103 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	KIF2A	O00139	706 aa	Predicted RBP	4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	MAGEB3	O15480	346 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	PSMD3	O43242	534 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	GRID2	O43424	1007 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	ATP8B1	O43520	1251 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	SLC25A17	O43808	307 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	NUDT21	O43809	227 aa	Known RBP	4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	VEGFD	O43915	354 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	USP12	O75317	370 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	BCAS2	O75934	225 aa	Predicted RBP	4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	KRT38	O76015	456 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	ATP1A1	P05023	1023 aa	Known RBP	4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	RPLP0	P05388	317 aa	Known RBP	4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	NHLRC4	P0CG21	123 aa	Predicted RBP	4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	GIMD1	P0DJR0	217 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	UBL4A	P11441	157 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	ACP5	P13686	325 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	GM2A	P17900	193 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	MSH3	P20585	1137 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	PSMB4	P28070	264 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	ALDH4A1	P30038	563 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	HMGCL	P35914	325 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	CENPA	P49450	140 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	CARS	P49589	748 aa	Known RBP	4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	MNAT1	P51948	309 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	DCDC1	P59894	354 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	PIGF	Q07326	219 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	EIF3I	Q13347	325 aa	Known RBP	4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	PTK6	Q13882	451 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	SLC1A5	Q15758	541 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	PARP6	Q2NL67	630 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	TYSND1	Q2T9J0	566 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	KHDC1L	Q5JSQ8	128 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	LDLRAP1	Q5SW96	308 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	CERCAM	Q5T4B2	595 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	HENMT1	Q5T8I9	393 aa	Known RBP	4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	TMEM154	Q6P9G4	183 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	INO80C	Q6PI98	192 aa	Predicted RBP	4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	TRAT1	Q6PIZ9	186 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	FAM151B	Q6UXP7	276 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	GSTA5	Q7RTV2	222 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	OTOA	Q7RTW8	1153 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	LINC00523	Q86TU6	105 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	TRIM74	Q86UV6	250 aa		4.5	□□□□□ -1.69

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