RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 CNPPD1Q9BV87 410 aa13.37□□□□□ -0.27
SDF2-202ENST00000585428 OR8D2Q9GZM6 311 aa13.37□□□□□ -0.27
SDF2-202ENST00000585428 DERL2Q9GZP9 239 aa13.37□□□□□ -0.27
SDF2-202ENST00000585428 POPDC3Q9HBV1 291 aa13.37□□□□□ -0.27
SDF2-202ENST00000585428 DNAJB12Q9NXW2 375 aaKnown RBP13.37□□□□□ -0.27
SDF2-202ENST00000585428 TUBA8Q9NY65 449 aaPredicted RBP13.37□□□□□ -0.27
SDF2-202ENST00000585428 SNX12Q9UMY4 172 aa13.37□□□□□ -0.27
SDF2-202ENST00000585428 ATG4BQ9Y4P1 393 aa13.37□□□□□ -0.27
SDF2-202ENST00000585428 ATP6AP2A0A1C7CYW4 349 aa13.36□□□□□ -0.27
SDF2-202ENST00000585428 C17orf105B2RV13 164 aa13.36□□□□□ -0.27
SDF2-202ENST00000585428 CLGNO14967 610 aa13.36□□□□□ -0.27
SDF2-202ENST00000585428 LDB3O75112 727 aa13.36□□□□□ -0.27
SDF2-202ENST00000585428 ATP6AP2O75787 350 aa13.36□□□□□ -0.27
SDF2-202ENST00000585428 ZWINTO95229 277 aa13.36□□□□□ -0.27
SDF2-202ENST00000585428 P04436 131 aa13.36□□□□□ -0.27
SDF2-202ENST00000585428 HOXB4P17483 251 aaPredicted RBP13.36□□□□□ -0.27
SDF2-202ENST00000585428 EPORP19235 508 aa13.36□□□□□ -0.27
SDF2-202ENST00000585428 TNNI3P19429 210 aa13.36□□□□□ -0.27
SDF2-202ENST00000585428 ENDOUP21128 410 aaKnown RBP13.36□□□□□ -0.27
SDF2-202ENST00000585428 CASP2P42575 452 aa13.36□□□□□ -0.27
SDF2-202ENST00000585428 KCNC1P48547 511 aa13.36□□□□□ -0.27
SDF2-202ENST00000585428 DNASE1L1P49184 302 aa13.36□□□□□ -0.27
SDF2-202ENST00000585428 MAN2A2P49641 1150 aa13.36□□□□□ -0.27
SDF2-202ENST00000585428 E2F2Q14209 437 aa13.36□□□□□ -0.27
SDF2-202ENST00000585428 SLC25A35Q3KQZ1 300 aa13.36□□□□□ -0.27
SDF2-202ENST00000585428 SLC22A10Q63ZE4 541 aa13.36□□□□□ -0.27
SDF2-202ENST00000585428 LYPD8Q6UX82 237 aa13.36□□□□□ -0.27
SDF2-202ENST00000585428 ZNF793Q6ZN11 406 aa13.36□□□□□ -0.27
SDF2-202ENST00000585428 FRA10AC1Q70Z53 315 aa13.36□□□□□ -0.27
SDF2-202ENST00000585428 TGIF2LYQ8IUE0 185 aa13.36□□□□□ -0.27
SDF2-202ENST00000585428 C7orf57Q8NEG2 295 aa13.36□□□□□ -0.27
SDF2-202ENST00000585428 SREK1Q8WXA9 508 aaKnown RBP13.36□□□□□ -0.27
SDF2-202ENST00000585428 ESAMQ96AP7 390 aa13.36□□□□□ -0.27
SDF2-202ENST00000585428 SARAFQ96BY9 339 aa13.36□□□□□ -0.27
SDF2-202ENST00000585428 PTCD3Q96EY7 689 aaKnown RBP13.36□□□□□ -0.27
SDF2-202ENST00000585428 SENP5Q96HI0 755 aaPredicted RBP13.36□□□□□ -0.27
SDF2-202ENST00000585428 VPS39Q96JC1 886 aa13.36□□□□□ -0.27
SDF2-202ENST00000585428 KCNC2Q96PR1 638 aa13.36□□□□□ -0.27
SDF2-202ENST00000585428 TMEM79Q9BSE2 394 aa13.36□□□□□ -0.27
SDF2-202ENST00000585428 TBCDQ9BTW9 1192 aa13.36□□□□□ -0.27
SDF2-202ENST00000585428 LIME1Q9H400 295 aa13.36□□□□□ -0.27
SDF2-202ENST00000585428 PROK2Q9HC23 129 aa13.36□□□□□ -0.27
SDF2-202ENST00000585428 CCM2LQ9NUG4 571 aaPredicted RBP13.36□□□□□ -0.27
SDF2-202ENST00000585428 DNAJC11Q9NVH1 559 aa13.36□□□□□ -0.27
SDF2-202ENST00000585428 ZNF358Q9NW07 568 aa13.36□□□□□ -0.27
SDF2-202ENST00000585428 PTBP2Q9UKA9 531 aaKnown RBP13.36□□□□□ -0.27
SDF2-202ENST00000585428 PCDHGB3Q9Y5G1 929 aa13.36□□□□□ -0.27
SDF2-202ENST00000585428 NIPBLQ6KC79 2804 aaeCLIP13.35□□□□□ -0.27
SDF2-202ENST00000585428 TRGV5A0A0B4J1U4 118 aa13.35□□□□□ -0.27
SDF2-202ENST00000585428 NCF1BA6NI72 391 aaPredicted RBP13.35□□□□□ -0.27
SDF2-202ENST00000585428 NCF1CA8MVU1 366 aaPredicted RBP13.35□□□□□ -0.27
SDF2-202ENST00000585428 STK16O75716 305 aa13.35□□□□□ -0.27
SDF2-202ENST00000585428 NADKO95544 446 aaPredicted RBP13.35□□□□□ -0.27
SDF2-202ENST00000585428 IGKV3-11P04433 115 aa13.35□□□□□ -0.27
SDF2-202ENST00000585428 RFPL3SP0C7P2 107 aa13.35□□□□□ -0.27
SDF2-202ENST00000585428 NCF1P14598 390 aaPredicted RBP13.35□□□□□ -0.27
SDF2-202ENST00000585428 GABRA1P14867 456 aa13.35□□□□□ -0.27
SDF2-202ENST00000585428 ATP5A1P25705 553 aaKnown RBP13.35□□□□□ -0.27
SDF2-202ENST00000585428 PIGAP37287 484 aa13.35□□□□□ -0.27
SDF2-202ENST00000585428 IGLV3-21P80748 117 aaPredicted RBP13.35□□□□□ -0.27
SDF2-202ENST00000585428 FOLH1Q04609 750 aa13.35□□□□□ -0.27
SDF2-202ENST00000585428 TGM3Q08188 693 aa13.35□□□□□ -0.27
SDF2-202ENST00000585428 ASPHQ12797 758 aa13.35□□□□□ -0.27
SDF2-202ENST00000585428 TBCCQ15814 346 aa13.35□□□□□ -0.27
SDF2-202ENST00000585428 WLSQ5T9L3 541 aa13.35□□□□□ -0.27
SDF2-202ENST00000585428 RIPPLY2Q5TAB7 128 aa13.35□□□□□ -0.27
SDF2-202ENST00000585428 SULT1C3Q6IMI6 304 aa13.35□□□□□ -0.27
SDF2-202ENST00000585428 SEM1Q6ZVN7 128 aa13.35□□□□□ -0.27
SDF2-202ENST00000585428 SLC35F6Q8N357 371 aa13.35□□□□□ -0.27
SDF2-202ENST00000585428 TCAIMQ8N3R3 496 aa13.35□□□□□ -0.27
SDF2-202ENST00000585428 SPATA6LQ8N4H0 392 aa13.35□□□□□ -0.27
SDF2-202ENST00000585428 SLC15A4Q8N697 577 aa13.35□□□□□ -0.27
SDF2-202ENST00000585428 ACOT4Q8N9L9 421 aa13.35□□□□□ -0.27
SDF2-202ENST00000585428 SRFBP1Q8NEF9 429 aaKnown RBP13.35□□□□□ -0.27
SDF2-202ENST00000585428 NUBPLQ8TB37 319 aa13.35□□□□□ -0.27
SDF2-202ENST00000585428 PAQR8Q8TEZ7 354 aa13.35□□□□□ -0.27
SDF2-202ENST00000585428 ROGDIQ9GZN7 287 aa13.35□□□□□ -0.27
SDF2-202ENST00000585428 RHOJQ9H4E5 214 aa13.35□□□□□ -0.27
SDF2-202ENST00000585428 LDAHQ9H6V9 325 aa13.35□□□□□ -0.27
SDF2-202ENST00000585428 CNOT10Q9H9A5 744 aaKnown RBP13.35□□□□□ -0.27
SDF2-202ENST00000585428 ACKR4Q9NPB9 350 aa13.35□□□□□ -0.27
SDF2-202ENST00000585428 MTO1Q9Y2Z2 717 aaKnown RBP13.35□□□□□ -0.27
SDF2-202ENST00000585428 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.35□□□□□ -0.27
SDF2-202ENST00000585428 MTORP42345 2549 aa13.35□□□□□ -0.27
SDF2-202ENST00000585428 SPG11Q96JI7 2443 aa13.34□□□□□ -0.27
SDF2-202ENST00000585428 ZNF469Q96JG9 3925 aaPredicted RBP13.34□□□□□ -0.27
SDF2-202ENST00000585428 SCELO95171 688 aa13.34□□□□□ -0.27
SDF2-202ENST00000585428 HSPA7P48741 367 aa13.34□□□□□ -0.27
SDF2-202ENST00000585428 ARL4CP56559 192 aa13.34□□□□□ -0.27
SDF2-202ENST00000585428 POU4F1Q01851 419 aa13.34□□□□□ -0.27
SDF2-202ENST00000585428 PCDH1Q08174 1060 aa13.34□□□□□ -0.27
SDF2-202ENST00000585428 BIKQ13323 160 aa13.34□□□□□ -0.27
SDF2-202ENST00000585428 LAPTM5Q13571 262 aa13.34□□□□□ -0.27
SDF2-202ENST00000585428 FBXO48Q5FWF7 155 aa13.34□□□□□ -0.27
SDF2-202ENST00000585428 C1orf185Q5T7R7 199 aa13.34□□□□□ -0.27
SDF2-202ENST00000585428 SYDE1Q6ZW31 735 aaPredicted RBP13.34□□□□□ -0.27
SDF2-202ENST00000585428 GPSM1Q86YR5 675 aa13.34□□□□□ -0.27
SDF2-202ENST00000585428 ANKMY2Q8IV38 441 aa13.34□□□□□ -0.27
SDF2-202ENST00000585428 ZNF473Q8WTR7 871 aaKnown RBP13.34□□□□□ -0.27
SDF2-202ENST00000585428 EFCAB11Q9BUY7 163 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms