RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 PIGGQ5H8A4 983 aa13.9□□□□□ -0.18
VAPA-209ENST00000585042 PRAMEF9Q5VWM5 478 aa13.9□□□□□ -0.18
VAPA-209ENST00000585042 C16orf47Q6ZP98 133 aaPredicted RBP13.9□□□□□ -0.18
VAPA-209ENST00000585042 MAATS1Q7Z4T9 603 aa13.9□□□□□ -0.18
VAPA-209ENST00000585042 CLNKQ7Z7G1 428 aa13.9□□□□□ -0.18
VAPA-209ENST00000585042 DND1Q8IYX4 353 aaKnown RBP13.9□□□□□ -0.18
VAPA-209ENST00000585042 ZBED8Q8IZ13 594 aa13.9□□□□□ -0.18
VAPA-209ENST00000585042 SLC15A4Q8N697 577 aa13.9□□□□□ -0.18
VAPA-209ENST00000585042 ACOT4Q8N9L9 421 aa13.9□□□□□ -0.18
VAPA-209ENST00000585042 SNX31Q8N9S9 440 aa13.9□□□□□ -0.18
VAPA-209ENST00000585042 OR5M3Q8NGP4 307 aa13.9□□□□□ -0.18
VAPA-209ENST00000585042 SLC2A12Q8TD20 617 aa13.9□□□□□ -0.18
VAPA-209ENST00000585042 PYROXD1Q8WU10 500 aa13.9□□□□□ -0.18
VAPA-209ENST00000585042 SCYL1Q96KG9 808 aa13.9□□□□□ -0.18
VAPA-209ENST00000585042 CSF3RQ99062 836 aa13.9□□□□□ -0.18
VAPA-209ENST00000585042 GPR22Q99680 433 aa13.9□□□□□ -0.18
VAPA-209ENST00000585042 CPNE1Q99829 537 aa13.9□□□□□ -0.18
VAPA-209ENST00000585042 CD244Q9BZW8 370 aa13.9□□□□□ -0.18
VAPA-209ENST00000585042 LIN28AQ9H9Z2 209 aaKnown RBP13.9□□□□□ -0.18
VAPA-209ENST00000585042 NPDC1Q9NQX5 325 aaPredicted RBP13.9□□□□□ -0.18
VAPA-209ENST00000585042 MS4A12Q9NXJ0 267 aa13.9□□□□□ -0.18
VAPA-209ENST00000585042 CD274Q9NZQ7 290 aa13.9□□□□□ -0.18
VAPA-209ENST00000585042 COPS7AQ9UBW8 275 aa13.9□□□□□ -0.18
VAPA-209ENST00000585042 ADGRE2Q9UHX3 823 aa13.9□□□□□ -0.18
VAPA-209ENST00000585042 PCDHGB3Q9Y5G1 929 aa13.9□□□□□ -0.18
VAPA-209ENST00000585042 ZNF407Q9C0G0 2248 aa13.9□□□□□ -0.18
VAPA-209ENST00000585042 DNAJC13O75165 2243 aa13.89□□□□□ -0.19
VAPA-209ENST00000585042 PINLYPA6NC86 204 aa13.89□□□□□ -0.19
VAPA-209ENST00000585042 C17orf105B2RV13 164 aa13.89□□□□□ -0.19
VAPA-209ENST00000585042 NPIPA2E9PIF3 369 aa13.89□□□□□ -0.19
VAPA-209ENST00000585042 NPIPA3F8WFD2 350 aa13.89□□□□□ -0.19
VAPA-209ENST00000585042 KIF2AO00139 706 aaPredicted RBP13.89□□□□□ -0.19
VAPA-209ENST00000585042 AQP7O14520 342 aa13.89□□□□□ -0.19
VAPA-209ENST00000585042 DYRK3O43781 588 aa13.89□□□□□ -0.19
VAPA-209ENST00000585042 HCN1O60741 890 aa13.89□□□□□ -0.19
VAPA-209ENST00000585042 WDR1O75083 606 aa13.89□□□□□ -0.19
VAPA-209ENST00000585042 P04436 131 aa13.89□□□□□ -0.19
VAPA-209ENST00000585042 GSTA2P09210 222 aa13.89□□□□□ -0.19
VAPA-209ENST00000585042 COX7A2P14406 83 aa13.89□□□□□ -0.19
VAPA-209ENST00000585042 CD1DP15813 335 aa13.89□□□□□ -0.19
VAPA-209ENST00000585042 ATP5A1P25705 553 aaKnown RBP13.89□□□□□ -0.19
VAPA-209ENST00000585042 NUP107P57740 925 aa13.89□□□□□ -0.19
VAPA-209ENST00000585042 IGLV3-21P80748 117 aaPredicted RBP13.89□□□□□ -0.19
VAPA-209ENST00000585042 IRF8Q02556 426 aa13.89□□□□□ -0.19
VAPA-209ENST00000585042 CKAP4Q07065 602 aaKnown RBP13.89□□□□□ -0.19
VAPA-209ENST00000585042 FOXO1Q12778 655 aa13.89□□□□□ -0.19
VAPA-209ENST00000585042 AP5B1Q2VPB7 878 aa13.89□□□□□ -0.19
VAPA-209ENST00000585042 ZNF750Q32MQ0 723 aa13.89□□□□□ -0.19
VAPA-209ENST00000585042 TRILQ7L0X0 811 aa13.89□□□□□ -0.19
VAPA-209ENST00000585042 LRRC70Q7Z2Q7 622 aa13.89□□□□□ -0.19
VAPA-209ENST00000585042 UBE3DQ7Z6J8 389 aa13.89□□□□□ -0.19
VAPA-209ENST00000585042 LAS2Q8IYD9 372 aa13.89□□□□□ -0.19
VAPA-209ENST00000585042 NUBPLQ8TB37 319 aa13.89□□□□□ -0.19
VAPA-209ENST00000585042 STAG3L4Q8TBR4 150 aa13.89□□□□□ -0.19
VAPA-209ENST00000585042 ZNF473Q8WTR7 871 aaKnown RBP13.89□□□□□ -0.19
VAPA-209ENST00000585042 SMC6Q96SB8 1091 aa13.89□□□□□ -0.19
VAPA-209ENST00000585042 KRT12Q99456 494 aa13.89□□□□□ -0.19
VAPA-209ENST00000585042 ZNF559Q9BR84 538 aa13.89□□□□□ -0.19
VAPA-209ENST00000585042 TTYH2Q9BSA4 534 aa13.89□□□□□ -0.19
VAPA-209ENST00000585042 MS4A8Q9BY19 250 aa13.89□□□□□ -0.19
VAPA-209ENST00000585042 UCK2Q9BZX2 261 aa13.89□□□□□ -0.19
VAPA-209ENST00000585042 PHACTR1Q9C0D0 580 aa13.89□□□□□ -0.19
VAPA-209ENST00000585042 OR8D2Q9GZM6 311 aa13.89□□□□□ -0.19
VAPA-209ENST00000585042 AKAP9Q99996 3911 aa13.89□□□□□ -0.19
VAPA-209ENST00000585042 MED13LQ71F56 2210 aa13.88□□□□□ -0.19
VAPA-209ENST00000585042 INTS1Q8N201 2190 aaKnown RBP13.88□□□□□ -0.19
VAPA-209ENST00000585042 NKX2-6A6NCS4 301 aa13.88□□□□□ -0.19
VAPA-209ENST00000585042 FAM166BA8MTA8 275 aa13.88□□□□□ -0.19
VAPA-209ENST00000585042 KLK8O60259 260 aa13.88□□□□□ -0.19
VAPA-209ENST00000585042 S100BP04271 92 aaPredicted RBP13.88□□□□□ -0.19
VAPA-209ENST00000585042 CD22P20273 847 aa13.88□□□□□ -0.19
VAPA-209ENST00000585042 HIST1H1TP22492 207 aaPredicted RBP13.88□□□□□ -0.19
VAPA-209ENST00000585042 RPL21P46778 160 aaKnown RBP13.88□□□□□ -0.19
VAPA-209ENST00000585042 ZFP36L2P47974 494 aaKnown RBP13.88□□□□□ -0.19
VAPA-209ENST00000585042 CHIT1Q13231 466 aa13.88□□□□□ -0.19
VAPA-209ENST00000585042 ZKSCAN8Q15776 578 aaPredicted RBP13.88□□□□□ -0.19
VAPA-209ENST00000585042 SLC22A10Q63ZE4 541 aa13.88□□□□□ -0.19
VAPA-209ENST00000585042 MED27Q6P2C8 311 aa13.88□□□□□ -0.19
VAPA-209ENST00000585042 B3GNT6Q6ZMB0 384 aa13.88□□□□□ -0.19
VAPA-209ENST00000585042 FAM47EQ6ZV65 393 aa13.88□□□□□ -0.19
VAPA-209ENST00000585042 CCDC71Q8IV32 467 aaPredicted RBP13.88□□□□□ -0.19
VAPA-209ENST00000585042 TMEM251Q8N6I4 163 aa13.88□□□□□ -0.19
VAPA-209ENST00000585042 SPATA4Q8NEY3 305 aa13.88□□□□□ -0.19
VAPA-209ENST00000585042 ZNF721Q8TF20 911 aa13.88□□□□□ -0.19
VAPA-209ENST00000585042 TANKQ92844 425 aa13.88□□□□□ -0.19
VAPA-209ENST00000585042 ANKRD9Q96BM1 317 aaPredicted RBP13.88□□□□□ -0.19
VAPA-209ENST00000585042 SARAFQ96BY9 339 aa13.88□□□□□ -0.19
VAPA-209ENST00000585042 CMTM7Q96FZ5 175 aa13.88□□□□□ -0.19
VAPA-209ENST00000585042 RBM18Q96H35 190 aaKnown RBP13.88□□□□□ -0.19
VAPA-209ENST00000585042 SENP5Q96HI0 755 aaPredicted RBP13.88□□□□□ -0.19
VAPA-209ENST00000585042 ART5Q96L15 291 aa13.88□□□□□ -0.19
VAPA-209ENST00000585042 C16orf45Q96MC5 204 aaPredicted RBP13.88□□□□□ -0.19
VAPA-209ENST00000585042 RBBP8Q99708 897 aa13.88□□□□□ -0.19
VAPA-209ENST00000585042 MAPKAP1Q9BPZ7 522 aa13.88□□□□□ -0.19
VAPA-209ENST00000585042 TRIM31Q9BZY9 425 aa13.88□□□□□ -0.19
VAPA-209ENST00000585042 SMYD2Q9NRG4 433 aa13.88□□□□□ -0.19
VAPA-209ENST00000585042 PNPLA3Q9NST1 481 aa13.88□□□□□ -0.19
VAPA-209ENST00000585042 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.88□□□□□ -0.19
VAPA-209ENST00000585042 RNF112Q9ULX5 631 aa13.88□□□□□ -0.19
VAPA-209ENST00000585042 TSC22D4Q9Y3Q8 395 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms