RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 PPP1R14CQ8TAE6 165 aa12.97□□□□□ -0.33
CSNK1D-224ENST00000584672 SLC5A11Q8WWX8 675 aa12.97□□□□□ -0.33
CSNK1D-224ENST00000584672 DAZLQ92904 295 aaKnown RBP12.97□□□□□ -0.33
CSNK1D-224ENST00000584672 ISL2Q96A47 359 aa12.97□□□□□ -0.33
CSNK1D-224ENST00000584672 ZNF669Q96BR6 464 aaPredicted RBP12.97□□□□□ -0.33
CSNK1D-224ENST00000584672 PIK3IP1Q96FE7 263 aa12.97□□□□□ -0.33
CSNK1D-224ENST00000584672 NDNQ99608 321 aa12.97□□□□□ -0.33
CSNK1D-224ENST00000584672 PIGQQ9BRB3 760 aa12.97□□□□□ -0.33
CSNK1D-224ENST00000584672 LACRTQ9GZZ8 138 aa12.97□□□□□ -0.33
CSNK1D-224ENST00000584672 PROK2Q9HC23 129 aa12.97□□□□□ -0.33
CSNK1D-224ENST00000584672 ACKR4Q9NPB9 350 aa12.97□□□□□ -0.33
CSNK1D-224ENST00000584672 EIF2B3Q9NR50 452 aaKnown RBP12.97□□□□□ -0.33
CSNK1D-224ENST00000584672 ARL15Q9NXU5 204 aa12.97□□□□□ -0.33
CSNK1D-224ENST00000584672 JKAMPQ9P055 326 aa12.97□□□□□ -0.33
CSNK1D-224ENST00000584672 NPFFR2Q9Y5X5 522 aa12.97□□□□□ -0.33
CSNK1D-224ENST00000584672 MED12Q93074 2177 aa12.96□□□□□ -0.33
CSNK1D-224ENST00000584672 ERI3O43414 337 aaKnown RBP12.96□□□□□ -0.33
CSNK1D-224ENST00000584672 ERN1O75460 977 aaKnown RBP12.96□□□□□ -0.33
CSNK1D-224ENST00000584672 GUCA1CO95843 209 aa12.96□□□□□ -0.33
CSNK1D-224ENST00000584672 TMIGD3P0DMS9 266 aaPredicted RBP12.96□□□□□ -0.33
CSNK1D-224ENST00000584672 HNRNPH1P31943 449 aaKnown RBP12.96□□□□□ -0.33
CSNK1D-224ENST00000584672 CYLC1P35663 651 aaPredicted RBP12.96□□□□□ -0.33
CSNK1D-224ENST00000584672 CPOXP36551 454 aa12.96□□□□□ -0.33
CSNK1D-224ENST00000584672 SLC1A2P43004 574 aa12.96□□□□□ -0.33
CSNK1D-224ENST00000584672 DHX34Q14147 1143 aaKnown RBP12.96□□□□□ -0.33
CSNK1D-224ENST00000584672 ACKR1Q16570 336 aa12.96□□□□□ -0.33
CSNK1D-224ENST00000584672 ZNF791Q3KP31 576 aaPredicted RBP12.96□□□□□ -0.33
CSNK1D-224ENST00000584672 DCST1Q5T197 706 aa12.96□□□□□ -0.33
CSNK1D-224ENST00000584672 DUPD1Q68J44 220 aa12.96□□□□□ -0.33
CSNK1D-224ENST00000584672 MYO1HQ8N1T3 1032 aa12.96□□□□□ -0.33
CSNK1D-224ENST00000584672 TRPV3Q8NET8 790 aa12.96□□□□□ -0.33
CSNK1D-224ENST00000584672 OR10G3Q8NGC4 313 aa12.96□□□□□ -0.33
CSNK1D-224ENST00000584672 OR5L2Q8NGL0 311 aa12.96□□□□□ -0.33
CSNK1D-224ENST00000584672 OR56A3Q8NH54 315 aa12.96□□□□□ -0.33
CSNK1D-224ENST00000584672 DOK4Q8TEW6 326 aa12.96□□□□□ -0.33
CSNK1D-224ENST00000584672 LINGO1Q96FE5 620 aa12.96□□□□□ -0.33
CSNK1D-224ENST00000584672 ALOXE3Q9BYJ1 711 aa12.96□□□□□ -0.33
CSNK1D-224ENST00000584672 MRPS33Q9Y291 106 aaKnown RBP12.96□□□□□ -0.33
CSNK1D-224ENST00000584672 PABPN1LA6NDY0 278 aaKnown RBP12.95□□□□□ -0.34
CSNK1D-224ENST00000584672 MBD3L3A6NE82 208 aaPredicted RBP12.95□□□□□ -0.34
CSNK1D-224ENST00000584672 B3GALT2O43825 422 aa12.95□□□□□ -0.34
CSNK1D-224ENST00000584672 LDB3O75112 727 aa12.95□□□□□ -0.34
CSNK1D-224ENST00000584672 HAUS5O94927 633 aa12.95□□□□□ -0.34
CSNK1D-224ENST00000584672 ETHE1O95571 254 aa12.95□□□□□ -0.34
CSNK1D-224ENST00000584672 ACSL3O95573 720 aa12.95□□□□□ -0.34
CSNK1D-224ENST00000584672 SERPINA6P08185 405 aa12.95□□□□□ -0.34
CSNK1D-224ENST00000584672 HIST1H2AGP0C0S8 130 aaPredicted RBP12.95□□□□□ -0.34
CSNK1D-224ENST00000584672 HIST1H2ADP20671 130 aa12.95□□□□□ -0.34
CSNK1D-224ENST00000584672 CERS1P27544 350 aa12.95□□□□□ -0.34
CSNK1D-224ENST00000584672 PTH2RP49190 550 aa12.95□□□□□ -0.34
CSNK1D-224ENST00000584672 RGS4P49798 205 aa12.95□□□□□ -0.34
CSNK1D-224ENST00000584672 PGGT1BP53609 377 aa12.95□□□□□ -0.34
CSNK1D-224ENST00000584672 PLA2G16P53816 162 aa12.95□□□□□ -0.34
CSNK1D-224ENST00000584672 STX4Q12846 297 aa12.95□□□□□ -0.34
CSNK1D-224ENST00000584672 TBX2Q13207 712 aaPredicted RBP12.95□□□□□ -0.34
CSNK1D-224ENST00000584672 PIGGQ5H8A4 983 aa12.95□□□□□ -0.34
CSNK1D-224ENST00000584672 UGT3A1Q6NUS8 523 aa12.95□□□□□ -0.34
CSNK1D-224ENST00000584672 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.95□□□□□ -0.34
CSNK1D-224ENST00000584672 ZNF595Q8IYB9 648 aa12.95□□□□□ -0.34
CSNK1D-224ENST00000584672 MBD3L2Q8NHZ7 208 aaPredicted RBP12.95□□□□□ -0.34
CSNK1D-224ENST00000584672 PAQR8Q8TEZ7 354 aa12.95□□□□□ -0.34
CSNK1D-224ENST00000584672 TMEM158Q8WZ71 300 aa12.95□□□□□ -0.34
CSNK1D-224ENST00000584672 GAL3ST3Q96A11 431 aa12.95□□□□□ -0.34
CSNK1D-224ENST00000584672 SPACA9Q96E40 222 aaPredicted RBP12.95□□□□□ -0.34
CSNK1D-224ENST00000584672 HIST1H2AHQ96KK5 128 aa12.95□□□□□ -0.34
CSNK1D-224ENST00000584672 HIST1H2AJQ99878 128 aa12.95□□□□□ -0.34
CSNK1D-224ENST00000584672 AIF1LQ9BQI0 150 aa12.95□□□□□ -0.34
CSNK1D-224ENST00000584672 H2AFJQ9BTM1 129 aa12.95□□□□□ -0.34
CSNK1D-224ENST00000584672 DOHHQ9BU89 302 aa12.95□□□□□ -0.34
CSNK1D-224ENST00000584672 PRDM14Q9GZV8 571 aa12.95□□□□□ -0.34
CSNK1D-224ENST00000584672 SH2D2AQ9NP31 389 aa12.95□□□□□ -0.34
CSNK1D-224ENST00000584672 KLHL28Q9NXS3 571 aa12.95□□□□□ -0.34
CSNK1D-224ENST00000584672 COPS7AQ9UBW8 275 aa12.95□□□□□ -0.34
CSNK1D-224ENST00000584672 REXO2Q9Y3B8 237 aaKnown RBP12.95□□□□□ -0.34
CSNK1D-224ENST00000584672 DYRK1BQ9Y463 629 aa12.95□□□□□ -0.34
CSNK1D-224ENST00000584672 WIF1Q9Y5W5 379 aa12.95□□□□□ -0.34
CSNK1D-224ENST00000584672 CD8B2A6NJW9 211 aa12.94□□□□□ -0.34
CSNK1D-224ENST00000584672 DEFB108AA8MXU0 73 aa12.94□□□□□ -0.34
CSNK1D-224ENST00000584672 MIF4GDA9UHW6 222 aaKnown RBP12.94□□□□□ -0.34
CSNK1D-224ENST00000584672 SNPHO15079 494 aa12.94□□□□□ -0.34
CSNK1D-224ENST00000584672 FPR1P21462 350 aa12.94□□□□□ -0.34
CSNK1D-224ENST00000584672 SOX18P35713 384 aa12.94□□□□□ -0.34
CSNK1D-224ENST00000584672 STXBP1P61764 594 aaKnown RBP12.94□□□□□ -0.34
CSNK1D-224ENST00000584672 DMTNQ08495 405 aa12.94□□□□□ -0.34
CSNK1D-224ENST00000584672 SP140Q13342 867 aa12.94□□□□□ -0.34
CSNK1D-224ENST00000584672 TOMM20Q15388 145 aa12.94□□□□□ -0.34
CSNK1D-224ENST00000584672 BICRALQ6AI39 1079 aa12.94□□□□□ -0.34
CSNK1D-224ENST00000584672 PODNL1Q6PEZ8 512 aa12.94□□□□□ -0.34
CSNK1D-224ENST00000584672 PAQR3Q6TCH7 311 aa12.94□□□□□ -0.34
CSNK1D-224ENST00000584672 LYPD8Q6UX82 237 aa12.94□□□□□ -0.34
CSNK1D-224ENST00000584672 C9orf40Q8IXQ3 194 aa12.94□□□□□ -0.34
CSNK1D-224ENST00000584672 KLHDC8AQ8IYD2 350 aa12.94□□□□□ -0.34
CSNK1D-224ENST00000584672 PM20D2Q8IYS1 436 aa12.94□□□□□ -0.34
CSNK1D-224ENST00000584672 CCDC170Q8IYT3 715 aa12.94□□□□□ -0.34
CSNK1D-224ENST00000584672 GCNT2Q8N0V5 402 aa12.94□□□□□ -0.34
CSNK1D-224ENST00000584672 OR8K3Q8NH51 312 aa12.94□□□□□ -0.34
CSNK1D-224ENST00000584672 SLC22A8Q8TCC7 542 aa12.94□□□□□ -0.34
CSNK1D-224ENST00000584672 ZNF597Q96LX8 424 aa12.94□□□□□ -0.34
CSNK1D-224ENST00000584672 UGT2B28Q9BY64 529 aa12.94□□□□□ -0.34
CSNK1D-224ENST00000584672 QPCTLQ9NXS2 382 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms