RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 FAM90A27PA6NNH2 459 aa9.81□□□□□ -0.84
RFFL-209ENST00000581265 FAM166BA8MTA8 275 aa9.81□□□□□ -0.84
RFFL-209ENST00000581265 KIR3DP1A8MWS1 328 aa9.81□□□□□ -0.84
RFFL-209ENST00000581265 SUSD5O60279 629 aa9.81□□□□□ -0.84
RFFL-209ENST00000581265 ZNF354AO60765 605 aaPredicted RBP9.81□□□□□ -0.84
RFFL-209ENST00000581265 CCDC166P0CW27 439 aa9.81□□□□□ -0.84
RFFL-209ENST00000581265 EPORP19235 508 aa9.81□□□□□ -0.84
RFFL-209ENST00000581265 TNNI3P19429 210 aa9.81□□□□□ -0.84
RFFL-209ENST00000581265 CD22P20273 847 aa9.81□□□□□ -0.84
RFFL-209ENST00000581265 ATP5A1P25705 553 aaKnown RBP9.81□□□□□ -0.84
RFFL-209ENST00000581265 HSPA7P48741 367 aa9.81□□□□□ -0.84
RFFL-209ENST00000581265 ATP6V0D1P61421 351 aa9.81□□□□□ -0.84
RFFL-209ENST00000581265 PCDH1Q08174 1060 aa9.81□□□□□ -0.84
RFFL-209ENST00000581265 PDK4Q16654 411 aa9.81□□□□□ -0.84
RFFL-209ENST00000581265 MPEG1Q2M385 716 aa9.81□□□□□ -0.84
RFFL-209ENST00000581265 TMEM35AQ53FP2 167 aa9.81□□□□□ -0.84
RFFL-209ENST00000581265 PAGE2BQ5JRK9 111 aa9.81□□□□□ -0.84
RFFL-209ENST00000581265 OPN5Q6U736 354 aa9.81□□□□□ -0.84
RFFL-209ENST00000581265 CYS1Q717R9 158 aa9.81□□□□□ -0.84
RFFL-209ENST00000581265 TRILQ7L0X0 811 aa9.81□□□□□ -0.84
RFFL-209ENST00000581265 TMEM200AQ86VY9 491 aa9.81□□□□□ -0.84
RFFL-209ENST00000581265 FAM109AQ8N4B1 249 aa9.81□□□□□ -0.84
RFFL-209ENST00000581265 TMEM251Q8N6I4 163 aa9.81□□□□□ -0.84
RFFL-209ENST00000581265 ZNF321PQ8N8H1 164 aa9.81□□□□□ -0.84
RFFL-209ENST00000581265 ACOT4Q8N9L9 421 aa9.81□□□□□ -0.84
RFFL-209ENST00000581265 OR5M3Q8NGP4 307 aa9.81□□□□□ -0.84
RFFL-209ENST00000581265 SLC2A12Q8TD20 617 aa9.81□□□□□ -0.84
RFFL-209ENST00000581265 ESAMQ96AP7 390 aa9.81□□□□□ -0.84
RFFL-209ENST00000581265 TSPAN17Q96FV3 270 aa9.81□□□□□ -0.84
RFFL-209ENST00000581265 UBXN10Q96LJ8 280 aa9.81□□□□□ -0.84
RFFL-209ENST00000581265 SMC6Q96SB8 1091 aa9.81□□□□□ -0.84
RFFL-209ENST00000581265 TTYH2Q9BSA4 534 aa9.81□□□□□ -0.84
RFFL-209ENST00000581265 SMYD2Q9NRG4 433 aa9.81□□□□□ -0.84
RFFL-209ENST00000581265 SACM1LQ9NTJ5 587 aa9.81□□□□□ -0.84
RFFL-209ENST00000581265 WWOXQ9NZC7 414 aa9.81□□□□□ -0.84
RFFL-209ENST00000581265 PTBP2Q9UKA9 531 aaKnown RBP9.81□□□□□ -0.84
RFFL-209ENST00000581265 AKAP6Q13023 2319 aa9.81□□□□□ -0.84
RFFL-209ENST00000581265 MYOCOSA0A1B0GUC4 107 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 FIGNL2A6NMB9 653 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 EFCAB8A8MWE9 144 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 C17orf105B2RV13 164 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 G3V3Y1 287 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 AQP7O14520 342 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 KLK8O60259 260 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 LDB3O75112 727 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 PIAS1O75925 651 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 SCELO95171 688 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 ETHE1O95571 254 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 IGKV3-11P04433 115 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 GLI4P10075 376 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 CD1DP15813 335 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 HIST1H1TP22492 207 aaPredicted RBP9.8□□□□□ -0.84
RFFL-209ENST00000581265 MAGEA5P43359 124 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 ZFP36L2P47974 494 aaKnown RBP9.8□□□□□ -0.84
RFFL-209ENST00000581265 IGLV3-21P80748 117 aaPredicted RBP9.8□□□□□ -0.84
RFFL-209ENST00000581265 IRF8Q02556 426 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 LTBQ06643 244 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 CHIT1Q13231 466 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 BIKQ13323 160 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 SLC10A1Q14973 349 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 OR4D1Q15615 310 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 HIST2H2ACQ16777 129 aaPredicted RBP9.8□□□□□ -0.84
RFFL-209ENST00000581265 FBXO48Q5FWF7 155 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 PIGGQ5H8A4 983 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 CES4AQ5XG92 561 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 HIST2H2AA3Q6FI13 130 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 RTL6Q6ICC9 239 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 ZNF585AQ6P3V2 769 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 B3GNT6Q6ZMB0 384 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 ZNF793Q6ZN11 406 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 FAM47EQ6ZV65 393 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 CHSY3Q70JA7 882 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 LAS2Q8IYD9 372 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 ZBED8Q8IZ13 594 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 CLYBLQ8N0X4 340 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 SNX31Q8N9S9 440 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 PDPRQ8NCN5 879 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 OR5M9Q8NGP3 310 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 OR10Q1Q8NGQ4 319 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 ZNF721Q8TF20 911 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 ZNF473Q8WTR7 871 aaKnown RBP9.8□□□□□ -0.84
RFFL-209ENST00000581265 UBE2E3Q969T4 207 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 ANKRD9Q96BM1 317 aaPredicted RBP9.8□□□□□ -0.84
RFFL-209ENST00000581265 SENP5Q96HI0 755 aaPredicted RBP9.8□□□□□ -0.84
RFFL-209ENST00000581265 MAPKAP1Q9BPZ7 522 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 ZNF559Q9BR84 538 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 MS4A8Q9BY19 250 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 CD244Q9BZW8 370 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 CAB39LQ9H9S4 337 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 TRMT1Q9NXH9 659 aaKnown RBP9.8□□□□□ -0.84
RFFL-209ENST00000581265 FAM215AQ9Y5M1 114 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 SPACA6W5XKT8 324 aa9.8□□□□□ -0.84
RFFL-209ENST00000581265 NIPBLQ6KC79 2804 aaeCLIP9.79□□□□□ -0.84
RFFL-209ENST00000581265 EML6Q6ZMW3 1958 aa9.79□□□□□ -0.84
RFFL-209ENST00000581265 ABCA4P78363 2273 aa9.79□□□□□ -0.84
RFFL-209ENST00000581265 CXorf49A8MYA2 514 aaPredicted RBP9.79□□□□□ -0.84
RFFL-209ENST00000581265 CCDC188H7C350 402 aa9.79□□□□□ -0.84
RFFL-209ENST00000581265 RTCAO00442 366 aaKnown RBP9.79□□□□□ -0.84
RFFL-209ENST00000581265 PHGDHO43175 533 aaKnown RBP9.79□□□□□ -0.84
RFFL-209ENST00000581265 HCN1O60741 890 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms