RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 TRBV4-1A0A0J9YWV2 114 aa13.75□□□□□ -0.21
SMG6-215ENST00000574501 C2orf78A6NCI8 922 aa13.75□□□□□ -0.21
SMG6-215ENST00000574501 SLC9A3R1O14745 358 aaPredicted RBP13.75□□□□□ -0.21
SMG6-215ENST00000574501 F2P00734 622 aa13.75□□□□□ -0.21
SMG6-215ENST00000574501 F11P03951 625 aa13.75□□□□□ -0.21
SMG6-215ENST00000574501 PRPH2P23942 346 aa13.75□□□□□ -0.21
SMG6-215ENST00000574501 SLC6A4P31645 630 aa13.75□□□□□ -0.21
SMG6-215ENST00000574501 RPS24P62847 133 aaKnown RBP13.75□□□□□ -0.21
SMG6-215ENST00000574501 EXOSC2Q13868 293 aaKnown RBP13.75□□□□□ -0.21
SMG6-215ENST00000574501 PRAMEF19Q5SWL8 479 aa13.75□□□□□ -0.21
SMG6-215ENST00000574501 ASB18Q6ZVZ8 466 aa13.75□□□□□ -0.21
SMG6-215ENST00000574501 PRSS42Q7Z5A4 293 aa13.75□□□□□ -0.21
SMG6-215ENST00000574501 IQCF1Q8N6M8 205 aa13.75□□□□□ -0.21
SMG6-215ENST00000574501 TTC9BQ8N6N2 239 aa13.75□□□□□ -0.21
SMG6-215ENST00000574501 ZBTB44Q8NCP5 570 aa13.75□□□□□ -0.21
SMG6-215ENST00000574501 GATAD2BQ8WXI9 593 aa13.75□□□□□ -0.21
SMG6-215ENST00000574501 SAMD11Q96NU1 681 aa13.75□□□□□ -0.21
SMG6-215ENST00000574501 RPL36Q9Y3U8 105 aaKnown RBP13.75□□□□□ -0.21
SMG6-215ENST00000574501 ZFP37Q9Y6Q3 630 aaPredicted RBP13.75□□□□□ -0.21
SMG6-215ENST00000574501 TRAV6A0A075B6T7 132 aa13.75□□□□□ -0.21
SMG6-215ENST00000574501 HEPACAM2A8MVW5 462 aa13.75□□□□□ -0.21
SMG6-215ENST00000574501 LZTS3O60299 673 aaPredicted RBP13.75□□□□□ -0.21
SMG6-215ENST00000574501 TPOP07202 933 aa13.75□□□□□ -0.21
SMG6-215ENST00000574501 CPEP16870 476 aa13.75□□□□□ -0.21
SMG6-215ENST00000574501 ATF6P18850 670 aa13.75□□□□□ -0.21
SMG6-215ENST00000574501 NNMTP40261 264 aa13.75□□□□□ -0.21
SMG6-215ENST00000574501 GSTM5P46439 218 aa13.75□□□□□ -0.21
SMG6-215ENST00000574501 PTPN5P54829 565 aa13.75□□□□□ -0.21
SMG6-215ENST00000574501 ZMYND11Q15326 602 aa13.75□□□□□ -0.21
SMG6-215ENST00000574501 UAP1L1Q3KQV9 507 aa13.75□□□□□ -0.21
SMG6-215ENST00000574501 ATXN7L2Q5T6C5 722 aaPredicted RBP13.75□□□□□ -0.21
SMG6-215ENST00000574501 LAPTM4BQ86VI4 370 aa13.75□□□□□ -0.21
SMG6-215ENST00000574501 NPAS3Q8IXF0 933 aa13.75□□□□□ -0.21
SMG6-215ENST00000574501 RBFAQ8N0V3 343 aa13.75□□□□□ -0.21
SMG6-215ENST00000574501 LRRC17Q8N6Y2 441 aa13.75□□□□□ -0.21
SMG6-215ENST00000574501 ZNF655Q8N720 491 aaPredicted RBP13.75□□□□□ -0.21
SMG6-215ENST00000574501 OR11H7Q8NGC8 314 aa13.75□□□□□ -0.21
SMG6-215ENST00000574501 OR4K1Q8NGD4 311 aa13.75□□□□□ -0.21
SMG6-215ENST00000574501 RIT1Q92963 219 aa13.75□□□□□ -0.21
SMG6-215ENST00000574501 SENP5Q96HI0 755 aaPredicted RBP13.75□□□□□ -0.21
SMG6-215ENST00000574501 KCNJ15Q99712 375 aa13.75□□□□□ -0.21
SMG6-215ENST00000574501 SOSTQ9BQB4 213 aa13.75□□□□□ -0.21
SMG6-215ENST00000574501 C1QTNF6Q9BXI9 259 aa13.75□□□□□ -0.21
SMG6-215ENST00000574501 THSD1Q9NS62 852 aa13.75□□□□□ -0.21
SMG6-215ENST00000574501 RPS10-NUDT3A0A1W2PQS6 291 aa13.74□□□□□ -0.21
SMG6-215ENST00000574501 A8MVJ9 347 aa13.74□□□□□ -0.21
SMG6-215ENST00000574501 F5H5T6 163 aa13.74□□□□□ -0.21
SMG6-215ENST00000574501 SYPP08247 313 aa13.74□□□□□ -0.21
SMG6-215ENST00000574501 SDHBP21912 280 aa13.74□□□□□ -0.21
SMG6-215ENST00000574501 SNRPGP62308 76 aaKnown RBP13.74□□□□□ -0.21
SMG6-215ENST00000574501 FABP5Q01469 135 aa13.74□□□□□ -0.21
SMG6-215ENST00000574501 BTN1A1Q13410 526 aa13.74□□□□□ -0.21
SMG6-215ENST00000574501 BOP1Q14137 746 aaKnown RBP13.74□□□□□ -0.21
SMG6-215ENST00000574501 CASP12Q6UXS9 341 aa13.74□□□□□ -0.21
SMG6-215ENST00000574501 GHDCQ8N2G8 530 aa13.74□□□□□ -0.21
SMG6-215ENST00000574501 HJURPQ8NCD3 748 aaPredicted RBP13.74□□□□□ -0.21
SMG6-215ENST00000574501 CEP76Q8TAP6 659 aa13.74□□□□□ -0.21
SMG6-215ENST00000574501 METTL2AQ96IZ6 378 aaKnown RBP13.74□□□□□ -0.21
SMG6-215ENST00000574501 HDHD2Q9H0R4 259 aa13.74□□□□□ -0.21
SMG6-215ENST00000574501 ATG10Q9H0Y0 220 aa13.74□□□□□ -0.21
SMG6-215ENST00000574501 PIGUQ9H490 435 aa13.74□□□□□ -0.21
SMG6-215ENST00000574501 LIN7BQ9HAP6 207 aa13.74□□□□□ -0.21
SMG6-215ENST00000574501 TVP23BQ9NYZ1 205 aa13.74□□□□□ -0.21
SMG6-215ENST00000574501 RAB23Q9ULC3 237 aa13.74□□□□□ -0.21
SMG6-215ENST00000574501 CCDC88CQ9P219 2028 aa13.74□□□□□ -0.21
SMG6-215ENST00000574501 QSOX1O00391 747 aa13.74□□□□□ -0.21
SMG6-215ENST00000574501 GAPDHSO14556 408 aaPredicted RBP13.74□□□□□ -0.21
SMG6-215ENST00000574501 SCAMP2O15127 329 aaKnown RBP13.74□□□□□ -0.21
SMG6-215ENST00000574501 TLX2O43763 284 aaPredicted RBP13.74□□□□□ -0.21
SMG6-215ENST00000574501 SERPINI2O75830 405 aa13.74□□□□□ -0.21
SMG6-215ENST00000574501 TP53P04637 393 aaPredicted RBP13.74□□□□□ -0.21
SMG6-215ENST00000574501 HOXD4P09016 255 aaPredicted RBP13.74□□□□□ -0.21
SMG6-215ENST00000574501 CTSHP09668 335 aa13.74□□□□□ -0.21
SMG6-215ENST00000574501 EVX1P49640 407 aa13.74□□□□□ -0.21
SMG6-215ENST00000574501 EPHA5P54756 1037 aa13.74□□□□□ -0.21
SMG6-215ENST00000574501 CHIT1Q13231 466 aa13.74□□□□□ -0.21
SMG6-215ENST00000574501 GRK1Q15835 563 aa13.74□□□□□ -0.21
SMG6-215ENST00000574501 GPR139Q6DWJ6 353 aa13.74□□□□□ -0.21
SMG6-215ENST00000574501 CERS6Q6ZMG9 384 aa13.74□□□□□ -0.21
SMG6-215ENST00000574501 OR52I1Q8NGK6 324 aa13.74□□□□□ -0.21
SMG6-215ENST00000574501 OR5AK3PQ8NH89 298 aa13.74□□□□□ -0.21
SMG6-215ENST00000574501 TMEM163Q8TC26 289 aa13.74□□□□□ -0.21
SMG6-215ENST00000574501 GEMIN6Q8WXD5 167 aaKnown RBP13.74□□□□□ -0.21
SMG6-215ENST00000574501 FBXO32Q969P5 355 aa13.74□□□□□ -0.21
SMG6-215ENST00000574501 CREB3L1Q96BA8 519 aa13.74□□□□□ -0.21
SMG6-215ENST00000574501 MAGEH1Q9H213 219 aa13.74□□□□□ -0.21
SMG6-215ENST00000574501 RDH14Q9HBH5 336 aa13.74□□□□□ -0.21
SMG6-215ENST00000574501 REV1Q9UBZ9 1251 aa13.74□□□□□ -0.21
SMG6-215ENST00000574501 ENOPH1Q9UHY7 261 aa13.74□□□□□ -0.21
SMG6-215ENST00000574501 MAP4K5Q9Y4K4 846 aa13.74□□□□□ -0.21
SMG6-215ENST00000574501 BRCA2P51587 3418 aa13.74□□□□□ -0.21
SMG6-215ENST00000574501 TRBC2A0A5B9 178 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 M0QZQ0 153 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 BET1O15155 118 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 LANCL1O43813 399 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 PAHP00439 452 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 BPIP17213 487 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 CXCL3P19876 107 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 AOAHP28039 575 aa13.73□□□□□ -0.21
SMG6-215ENST00000574501 CLCNKAP51800 687 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms