RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 IL20RBQ6UXL0 311 aa8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 C16orf47Q6ZP98 133 aaPredicted RBP8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 UBE3DQ7Z6J8 389 aa8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 SULF2Q8IWU5 870 aa8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 POGLUT1Q8NBL1 392 aa8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 MORN4Q8NDC4 146 aa8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 MNS1Q8NEH6 495 aa8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 HUS1BQ8NHY5 278 aa8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 SLC2A12Q8TD20 617 aa8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 ATP6V1E2Q96A05 226 aa8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 RGMAQ96B86 450 aa8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 DGAT2Q96PD7 388 aa8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 FMO2Q99518 471 aa8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 SORBS1Q9BX66 1292 aaKnown RBP8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 CDC42EP4Q9H3Q1 356 aaKnown RBP8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 ACSS3Q9H6R3 686 aa8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 RUBCNLQ9H714 662 aa8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 TRIM45Q9H8W5 580 aaPredicted RBP8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 DMRT3Q9NQL9 472 aa8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 ZDHHC18Q9NUE0 388 aa8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 PHF11Q9UIL8 331 aa8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 ENTPD4Q9Y227 616 aa8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 PCDHGA11Q9Y5H2 935 aa8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 CLDN16Q9Y5I7 305 aa8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 EXPH5Q8NEV8 1989 aa8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 NCKAP5O14513 1909 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 NINQ8N4C6 2090 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 CCDC189A1A4V9 331 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 LRRC14BA6NHZ5 514 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 POC1B-GALNT4F8VUJ3 575 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 ACOT7O00154 380 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 HS6ST1O60243 411 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 FGF17O60258 216 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 SIX3O95343 332 aaPredicted RBP8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 ALDOAP04075 364 aaKnown RBP8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 TPOP07202 933 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 SNRPB2P08579 225 aaKnown RBP8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 FREM3P0C091 2139 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 CTAGE8P0CG41 777 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 MTHFD2P13995 350 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 HTR1EP28566 365 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 PTGER1P34995 402 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 SOX3P41225 446 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 PIK3CBP42338 1070 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 GPR143P51810 404 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 CCNG1P51959 295 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 HK2P52789 917 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 RPS13P62277 151 aaKnown RBP8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 PLIN5Q00G26 463 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 TNFRSF17Q02223 184 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 ART3Q13508 389 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 E2F2Q14209 437 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 TECRLQ5HYJ1 363 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 RNFT1Q5M7Z0 435 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 UBAP2Q5T6F2 1119 aaKnown RBP8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 DEPDC1Q5TB30 811 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 CYP20A1Q6UW02 462 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 C3P1Q6ZMU1 363 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 BNC2Q6ZN30 1099 aaPredicted RBP8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 MDGA2Q7Z553 956 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 GOLGA7Q7Z5G4 137 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 ZNF227Q86WZ6 799 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 SIAH3Q8IW03 269 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 CTAGE4Q8IX94 777 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 OR4N5Q8IXE1 308 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 EID3Q8N140 333 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 ARMC10Q8N2F6 343 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 ZNF321PQ8N8H1 164 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 PTGR2Q8N8N7 351 aaPredicted RBP8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 PSD4Q8NDX1 1056 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 UHMK1Q8TAS1 419 aaKnown RBP8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 AGAP11Q8TF27 550 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 PTPMT1Q8WUK0 201 aaPredicted RBP8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 PHF21BQ96EK2 531 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 RASL10BQ96S79 203 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 PAFAH2Q99487 392 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 TSPYL1Q9H0U9 437 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 RPF2Q9H7B2 306 aaKnown RBP8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 IPPKQ9H8X2 491 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 MS4A12Q9NXJ0 267 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 MYOTQ9UBF9 498 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 VTI1BQ9UEU0 232 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 PPIEQ9UNP9 301 aaKnown RBP8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 TNPO3Q9Y5L0 923 aaKnown RBP8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 ARHGAP21Q5T5U3 1957 aa8.97□□□□□ -0.97
NPLOC4-212ENST00000573328 A0A1B0GTH9 108 aa8.96□□□□□ -0.98
NPLOC4-212ENST00000573328 HMX2A2RU54 273 aa8.96□□□□□ -0.98
NPLOC4-212ENST00000573328 FAM166BA8MTA8 275 aa8.96□□□□□ -0.98
NPLOC4-212ENST00000573328 G3V3Y1 287 aa8.96□□□□□ -0.98
NPLOC4-212ENST00000573328 PLPP1O14494 284 aa8.96□□□□□ -0.98
NPLOC4-212ENST00000573328 OR10H2O60403 315 aa8.96□□□□□ -0.98
NPLOC4-212ENST00000573328 UGDHO60701 494 aa8.96□□□□□ -0.98
NPLOC4-212ENST00000573328 SMIM24O75264 130 aa8.96□□□□□ -0.98
NPLOC4-212ENST00000573328 PRKRAO75569 313 aaKnown RBP8.96□□□□□ -0.98
NPLOC4-212ENST00000573328 KRT38O76015 456 aa8.96□□□□□ -0.98
NPLOC4-212ENST00000573328 OR6B1O95007 311 aa8.96□□□□□ -0.98
NPLOC4-212ENST00000573328 SCELO95171 688 aa8.96□□□□□ -0.98
NPLOC4-212ENST00000573328 RBP1P09455 135 aa8.96□□□□□ -0.98
NPLOC4-212ENST00000573328 PTX3P26022 381 aaPredicted RBP8.96□□□□□ -0.98
NPLOC4-212ENST00000573328 GRNP28799 593 aaKnown RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms