RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 PRAMEF9Q5VWM5 478 aa6.97□□□□□ -1.29
NUP88-205ENST00000572809 PAPD4Q6PIY7 484 aaKnown RBP6.97□□□□□ -1.29
NUP88-205ENST00000572809 QSOX2Q6ZRP7 698 aa6.97□□□□□ -1.29
NUP88-205ENST00000572809 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.97□□□□□ -1.29
NUP88-205ENST00000572809 CA13Q8N1Q1 262 aa6.97□□□□□ -1.29
NUP88-205ENST00000572809 NOA1Q8NC60 698 aaKnown RBP6.97□□□□□ -1.29
NUP88-205ENST00000572809 OR2L5Q8NG80 312 aa6.97□□□□□ -1.29
NUP88-205ENST00000572809 RHEBL1Q8TAI7 183 aa6.97□□□□□ -1.29
NUP88-205ENST00000572809 KCTD4Q8WVF5 259 aa6.97□□□□□ -1.29
NUP88-205ENST00000572809 EXT2Q93063 718 aa6.97□□□□□ -1.29
NUP88-205ENST00000572809 TSLPQ969D9 159 aa6.97□□□□□ -1.29
NUP88-205ENST00000572809 WDR34Q96EX3 536 aa6.97□□□□□ -1.29
NUP88-205ENST00000572809 ATOH8Q96SQ7 321 aa6.97□□□□□ -1.29
NUP88-205ENST00000572809 EFCAB11Q9BUY7 163 aa6.97□□□□□ -1.29
NUP88-205ENST00000572809 NPLQ9BXD5 320 aaPredicted RBP6.97□□□□□ -1.29
NUP88-205ENST00000572809 REXO4Q9GZR2 422 aaKnown RBP6.97□□□□□ -1.29
NUP88-205ENST00000572809 AICDAQ9GZX7 198 aa6.97□□□□□ -1.29
NUP88-205ENST00000572809 RNF32Q9H0A6 362 aa6.97□□□□□ -1.29
NUP88-205ENST00000572809 MMP25Q9NPA2 562 aa6.97□□□□□ -1.29
NUP88-205ENST00000572809 NINJ2Q9NZG7 142 aa6.97□□□□□ -1.29
NUP88-205ENST00000572809 NUDT4Q9NZJ9 180 aa6.97□□□□□ -1.29
NUP88-205ENST00000572809 STOML1Q9UBI4 398 aa6.97□□□□□ -1.29
NUP88-205ENST00000572809 OPTCQ9UBM4 332 aa6.97□□□□□ -1.29
NUP88-205ENST00000572809 SHANK1Q9Y566 2161 aa6.96□□□□□ -1.29
NUP88-205ENST00000572809 SETXQ7Z333 2677 aaKnown RBP6.96□□□□□ -1.29
NUP88-205ENST00000572809 FLNCQ14315 2725 aa6.96□□□□□ -1.29
NUP88-205ENST00000572809 A0A088AWK7 358 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 A0A096LPK6 155 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 A0A0G2JN53 185 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 CCDC189A1A4V9 331 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 BLACEA4D250 179 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 A8MUA0 341 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 C4orf51C9J302 202 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 K7EPI3 171 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 UBXN8O00124 270 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 CLDN4O14493 209 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 B3GALT2O43825 422 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 KERAO60938 352 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 KLHL2O95198 593 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 TBX6O95947 436 aaPredicted RBP6.96□□□□□ -1.3
NUP88-205ENST00000572809 INHBAP08476 426 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 MTHFD2P13995 350 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 EPORP19235 508 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 CD22P20273 847 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 MAOAP21397 527 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 ZNF10P21506 573 aaPredicted RBP6.96□□□□□ -1.3
NUP88-205ENST00000572809 PLA2G16P53816 162 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 MTTPP55157 894 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 SLC26A5P58743 744 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 IRF9Q00978 393 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 TGM3Q08188 693 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 BMPR2Q13873 1038 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 E2F2Q14209 437 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 TBCCQ15814 346 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 PFKFB4Q16877 469 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 ADPRMQ3LIE5 342 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 FCRLBQ6BAA4 426 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 KLC3Q6P597 504 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 TRIM40Q6P9F5 258 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 ABHD17CQ6PCB6 329 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 FAM180AQ6UWF9 173 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 LRRC70Q7Z2Q7 622 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 RPS19BP1Q86WX3 136 aaKnown RBP6.96□□□□□ -1.3
NUP88-205ENST00000572809 CENPLQ8N0S6 344 aaPredicted RBP6.96□□□□□ -1.3
NUP88-205ENST00000572809 LILRB2Q8N423 598 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 ST6GALNAC3Q8NDV1 305 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 SRFBP1Q8NEF9 429 aaKnown RBP6.96□□□□□ -1.3
NUP88-205ENST00000572809 KIF18AQ8NI77 898 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 ELP5Q8TE02 316 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 SSC4DQ8WTU2 575 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 UBE2E3Q969T4 207 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 ISL2Q96A47 359 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 QRFPRQ96P65 431 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 F2RL3Q96RI0 385 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 SERINC2Q96SA4 455 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 FMO2Q99518 471 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 FUT8Q9BYC5 575 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 CDC42EP4Q9H3Q1 356 aaKnown RBP6.96□□□□□ -1.3
NUP88-205ENST00000572809 CDCP1Q9H5V8 836 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 ACSS3Q9H6R3 686 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 NECTIN3Q9NQS3 549 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 PRDM7Q9NQW5 492 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 SNX15Q9NRS6 342 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 ABI3Q9P2A4 366 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 MMACHCQ9Y4U1 282 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 ASB1Q9Y576 335 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 ANGPTL3Q9Y5C1 460 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 IKBKGQ9Y6K9 419 aa6.96□□□□□ -1.3
NUP88-205ENST00000572809 ASH1LQ9NR48 2969 aaKnown RBP6.96□□□□□ -1.3
NUP88-205ENST00000572809 SCN2AQ99250 2005 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 IGKV3D-11A0A0A0MRZ8 115 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 TCRBV16S1A1N1A0A5B0 115 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 POC1B-GALNT4F8VUJ3 575 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 PRAMEF2O60811 474 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 RASAL1O95294 804 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 ACSL3O95573 720 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 DDAH2O95865 285 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 ALDOAP04075 364 aaKnown RBP6.95□□□□□ -1.3
NUP88-205ENST00000572809 PCNAP12004 261 aa6.95□□□□□ -1.3
NUP88-205ENST00000572809 GP1BBP13224 206 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms