RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 LANCL2Q9NS86 450 aa22.09■■□□□ 1.13
RAB40C-212ENST00000569575 ATAD3AQ9NVI7 634 aa22.09■■□□□ 1.13
RAB40C-212ENST00000569575 CTSFQ9UBX1 484 aa22.09■■□□□ 1.13
RAB40C-212ENST00000569575 TEX51A0A1B0GUA7 166 aa22.08■■□□□ 1.13
RAB40C-212ENST00000569575 SLC22A2O15244 555 aa22.08■■□□□ 1.13
RAB40C-212ENST00000569575 CCDC22O60826 627 aa22.08■■□□□ 1.13
RAB40C-212ENST00000569575 KLF7O75840 302 aaPredicted RBP22.08■■□□□ 1.13
RAB40C-212ENST00000569575 AIFM1O95831 613 aa22.08■■□□□ 1.13
RAB40C-212ENST00000569575 IL3P08700 152 aa22.08■■□□□ 1.13
RAB40C-212ENST00000569575 ALDOCP09972 364 aaKnown RBP22.08■■□□□ 1.13
RAB40C-212ENST00000569575 DLSTP36957 453 aa22.08■■□□□ 1.13
RAB40C-212ENST00000569575 FOLR3P41439 243 aa22.08■■□□□ 1.13
RAB40C-212ENST00000569575 DIO3P55073 304 aa22.08■■□□□ 1.13
RAB40C-212ENST00000569575 ACTN3Q08043 901 aaPredicted RBP22.08■■□□□ 1.13
RAB40C-212ENST00000569575 SSPNQ14714 243 aa22.08■■□□□ 1.13
RAB40C-212ENST00000569575 SYT16Q17RD7 645 aa22.08■■□□□ 1.13
RAB40C-212ENST00000569575 CRTC2Q53ET0 693 aaPredicted RBP22.08■■□□□ 1.13
RAB40C-212ENST00000569575 VWA2Q5GFL6 755 aa22.08■■□□□ 1.13
RAB40C-212ENST00000569575 LCN10Q6JVE6 187 aa22.08■■□□□ 1.13
RAB40C-212ENST00000569575 FAM199XQ6PEV8 388 aaPredicted RBP22.08■■□□□ 1.13
RAB40C-212ENST00000569575 MIER2Q8N344 545 aa22.08■■□□□ 1.13
RAB40C-212ENST00000569575 ANKS4BQ8N8V4 417 aa22.08■■□□□ 1.13
RAB40C-212ENST00000569575 TESCQ96BS2 214 aa22.08■■□□□ 1.13
RAB40C-212ENST00000569575 DPY30Q9C005 99 aa22.08■■□□□ 1.13
RAB40C-212ENST00000569575 AKIRIN1Q9H9L7 192 aaPredicted RBP22.08■■□□□ 1.13
RAB40C-212ENST00000569575 GPN2Q9H9Y4 310 aaPredicted RBP22.08■■□□□ 1.13
RAB40C-212ENST00000569575 GIMAP4Q9NUV9 329 aa22.08■■□□□ 1.13
RAB40C-212ENST00000569575 TEX10Q9NXF1 929 aaPredicted RBP22.08■■□□□ 1.13
RAB40C-212ENST00000569575 GIMAP2Q9UG22 337 aa22.08■■□□□ 1.13
RAB40C-212ENST00000569575 ATP6V1HQ9UI12 483 aa22.08■■□□□ 1.13
RAB40C-212ENST00000569575 CROTQ9UKG9 612 aa22.08■■□□□ 1.13
RAB40C-212ENST00000569575 TCFL5Q9UL49 500 aa22.08■■□□□ 1.13
RAB40C-212ENST00000569575 DNAJB6O75190 326 aa22.07■■□□□ 1.12
RAB40C-212ENST00000569575 TACR1P25103 407 aa22.07■■□□□ 1.12
RAB40C-212ENST00000569575 FOXK2Q01167 660 aa22.07■■□□□ 1.12
RAB40C-212ENST00000569575 MC1RQ01726 317 aa22.07■■□□□ 1.12
RAB40C-212ENST00000569575 SRSF11Q05519 484 aaKnown RBP22.07■■□□□ 1.12
RAB40C-212ENST00000569575 LRRC74AQ0VAA2 488 aa22.07■■□□□ 1.12
RAB40C-212ENST00000569575 PDE7AQ13946 482 aa22.07■■□□□ 1.12
RAB40C-212ENST00000569575 CAMKMTQ7Z624 323 aa22.07■■□□□ 1.12
RAB40C-212ENST00000569575 SCUBE1Q8IWY4 988 aa22.07■■□□□ 1.12
RAB40C-212ENST00000569575 RIMKLAQ8IXN7 391 aa22.07■■□□□ 1.12
RAB40C-212ENST00000569575 ENDOVQ8N8Q3 282 aaKnown RBP22.07■■□□□ 1.12
RAB40C-212ENST00000569575 OR4K14Q8NGD5 310 aa22.07■■□□□ 1.12
RAB40C-212ENST00000569575 DNAJB14Q8TBM8 379 aa22.07■■□□□ 1.12
RAB40C-212ENST00000569575 METTL21AQ8WXB1 218 aa22.07■■□□□ 1.12
RAB40C-212ENST00000569575 THOC1Q96FV9 657 aaKnown RBP22.07■■□□□ 1.12
RAB40C-212ENST00000569575 TSSK3Q96PN8 268 aa22.07■■□□□ 1.12
RAB40C-212ENST00000569575 ZBTB18Q99592 522 aa22.07■■□□□ 1.12
RAB40C-212ENST00000569575 FAM107BQ9H098 131 aa22.07■■□□□ 1.12
RAB40C-212ENST00000569575 C19orf25Q9UFG5 118 aaPredicted RBP22.07■■□□□ 1.12
RAB40C-212ENST00000569575 CES1P1Q9UKY3 287 aa22.07■■□□□ 1.12
RAB40C-212ENST00000569575 MKL2Q9ULH7 1088 aa22.07■■□□□ 1.12
RAB40C-212ENST00000569575 ARL2BPQ9Y2Y0 163 aa22.07■■□□□ 1.12
RAB40C-212ENST00000569575 NUP210LQ5VU65 1888 aa22.07■■□□□ 1.12
RAB40C-212ENST00000569575 DYTNA2CJ06 578 aa22.06■■□□□ 1.12
RAB40C-212ENST00000569575 TMEM8BA6NDV4 472 aa22.06■■□□□ 1.12
RAB40C-212ENST00000569575 E9PBE3 544 aa22.06■■□□□ 1.12
RAB40C-212ENST00000569575 ANKRD28O15084 1053 aa22.06■■□□□ 1.12
RAB40C-212ENST00000569575 KLHL41O60662 606 aa22.06■■□□□ 1.12
RAB40C-212ENST00000569575 GPR75O95800 540 aa22.06■■□□□ 1.12
RAB40C-212ENST00000569575 HEXBP07686 556 aa22.06■■□□□ 1.12
RAB40C-212ENST00000569575 FURINP09958 794 aa22.06■■□□□ 1.12
RAB40C-212ENST00000569575 PIK3R1P27986 724 aa22.06■■□□□ 1.12
RAB40C-212ENST00000569575 GALNSP34059 522 aa22.06■■□□□ 1.12
RAB40C-212ENST00000569575 EMP2P54851 167 aa22.06■■□□□ 1.12
RAB40C-212ENST00000569575 IGLV3-21P80748 117 aaPredicted RBP22.06■■□□□ 1.12
RAB40C-212ENST00000569575 SLC13A2Q13183 592 aa22.06■■□□□ 1.12
RAB40C-212ENST00000569575 SQLEQ14534 574 aa22.06■■□□□ 1.12
RAB40C-212ENST00000569575 CPSF7Q8N684 471 aaKnown RBP22.06■■□□□ 1.12
RAB40C-212ENST00000569575 KCNE4Q8WWG9 221 aa22.06■■□□□ 1.12
RAB40C-212ENST00000569575 BAIAP2L1Q9UHR4 511 aa22.06■■□□□ 1.12
RAB40C-212ENST00000569575 PTRH2Q9Y3E5 179 aaKnown RBP22.06■■□□□ 1.12
RAB40C-212ENST00000569575 ZNF780BQ9Y6R6 833 aa22.06■■□□□ 1.12
RAB40C-212ENST00000569575 LOC101059948A0A1B0GTJ6 334 aa22.05■■□□□ 1.12
RAB40C-212ENST00000569575 IDSB3KWA1 339 aa22.05■■□□□ 1.12
RAB40C-212ENST00000569575 SCAMP2O15127 329 aaKnown RBP22.05■■□□□ 1.12
RAB40C-212ENST00000569575 B4GALT2O60909 372 aa22.05■■□□□ 1.12
RAB40C-212ENST00000569575 SLC22A3O75751 556 aa22.05■■□□□ 1.12
RAB40C-212ENST00000569575 RHAGQ02094 409 aa22.05■■□□□ 1.12
RAB40C-212ENST00000569575 STX4Q12846 297 aa22.05■■□□□ 1.12
RAB40C-212ENST00000569575 PTGR1Q14914 329 aa22.05■■□□□ 1.12
RAB40C-212ENST00000569575 CEBPEQ15744 281 aa22.05■■□□□ 1.12
RAB40C-212ENST00000569575 MINDY4Q4G0A6 757 aa22.05■■□□□ 1.12
RAB40C-212ENST00000569575 C18orf63Q68DL7 685 aa22.05■■□□□ 1.12
RAB40C-212ENST00000569575 FAM47BQ8NA70 645 aa22.05■■□□□ 1.12
RAB40C-212ENST00000569575 TSPEARQ8WU66 669 aa22.05■■□□□ 1.12
RAB40C-212ENST00000569575 PPCDCQ96CD2 204 aa22.05■■□□□ 1.12
RAB40C-212ENST00000569575 COQ8BQ96D53 544 aa22.05■■□□□ 1.12
RAB40C-212ENST00000569575 EGLN2Q96KS0 407 aa22.05■■□□□ 1.12
RAB40C-212ENST00000569575 PTCHD1Q96NR3 888 aa22.05■■□□□ 1.12
RAB40C-212ENST00000569575 CSF3RQ99062 836 aa22.05■■□□□ 1.12
RAB40C-212ENST00000569575 CRB3Q9BUF7 120 aa22.05■■□□□ 1.12
RAB40C-212ENST00000569575 VN1R1Q9GZP7 353 aa22.05■■□□□ 1.12
RAB40C-212ENST00000569575 C3orf18Q9UK00 162 aa22.05■■□□□ 1.12
RAB40C-212ENST00000569575 SPEGQ15772 3267 aa22.05■■□□□ 1.12
RAB40C-212ENST00000569575 IGKV3D-11A0A0A0MRZ8 115 aa22.04■■□□□ 1.12
RAB40C-212ENST00000569575 FAM227AF5H4B4 570 aa22.04■■□□□ 1.12
RAB40C-212ENST00000569575 SLITRK5O94991 958 aa22.04■■□□□ 1.12
RAB40C-212ENST00000569575 CSNK2A2P19784 350 aaPredicted RBP22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms