RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 PROM1O43490 865 aa12.91□□□□□ -0.34
HERPUD1-218ENST00000569569 EEDO75530 441 aaKnown RBP12.91□□□□□ -0.34
HERPUD1-218ENST00000569569 KRT6AP02538 564 aa12.91□□□□□ -0.34
HERPUD1-218ENST00000569569 KRT6BP04259 564 aa12.91□□□□□ -0.34
HERPUD1-218ENST00000569569 IFNA16P05015 189 aa12.91□□□□□ -0.34
HERPUD1-218ENST00000569569 FAM58BPP0C7Q3 252 aa12.91□□□□□ -0.34
HERPUD1-218ENST00000569569 CPA3P15088 417 aa12.91□□□□□ -0.34
HERPUD1-218ENST00000569569 PPP2R1BP30154 601 aa12.91□□□□□ -0.34
HERPUD1-218ENST00000569569 HMOX2P30519 316 aa12.91□□□□□ -0.34
HERPUD1-218ENST00000569569 KRT6CP48668 564 aa12.91□□□□□ -0.34
HERPUD1-218ENST00000569569 TNFSF10P50591 281 aa12.91□□□□□ -0.34
HERPUD1-218ENST00000569569 CLCN2P51788 898 aa12.91□□□□□ -0.34
HERPUD1-218ENST00000569569 HNRNPH2P55795 449 aaKnown RBP12.91□□□□□ -0.34
HERPUD1-218ENST00000569569 DNAJB13P59910 316 aa12.91□□□□□ -0.34
HERPUD1-218ENST00000569569 TNFRSF17Q02223 184 aa12.91□□□□□ -0.34
HERPUD1-218ENST00000569569 LCP2Q13094 533 aa12.91□□□□□ -0.34
HERPUD1-218ENST00000569569 ELAVL1Q15717 326 aaKnown RBP12.91□□□□□ -0.34
HERPUD1-218ENST00000569569 FCRLBQ6BAA4 426 aa12.91□□□□□ -0.34
HERPUD1-218ENST00000569569 PAGE2Q7Z2X7 111 aa12.91□□□□□ -0.34
HERPUD1-218ENST00000569569 ATCAYQ86WG3 371 aa12.91□□□□□ -0.34
HERPUD1-218ENST00000569569 RPS19BP1Q86WX3 136 aaKnown RBP12.91□□□□□ -0.34
HERPUD1-218ENST00000569569 CRLF3Q8IUI8 442 aa12.91□□□□□ -0.34
HERPUD1-218ENST00000569569 METTL4Q8N3J2 472 aa12.91□□□□□ -0.34
HERPUD1-218ENST00000569569 CISD2Q8N5K1 135 aaKnown RBP12.91□□□□□ -0.34
HERPUD1-218ENST00000569569 CCNYL1Q8N7R7 359 aa12.91□□□□□ -0.34
HERPUD1-218ENST00000569569 OR1N1Q8NGS0 311 aa12.91□□□□□ -0.34
HERPUD1-218ENST00000569569 METTL6Q8TCB7 284 aa12.91□□□□□ -0.34
HERPUD1-218ENST00000569569 TANKQ92844 425 aa12.91□□□□□ -0.34
HERPUD1-218ENST00000569569 ANKRD9Q96BM1 317 aaPredicted RBP12.91□□□□□ -0.34
HERPUD1-218ENST00000569569 SNRNP40Q96DI7 357 aaKnown RBP12.91□□□□□ -0.34
HERPUD1-218ENST00000569569 PHF12Q96QT6 1004 aa12.91□□□□□ -0.34
HERPUD1-218ENST00000569569 TMEM109Q9BVC6 243 aa12.91□□□□□ -0.34
HERPUD1-218ENST00000569569 DEFB126Q9BYW3 111 aa12.91□□□□□ -0.34
HERPUD1-218ENST00000569569 SLC29A3Q9BZD2 475 aa12.91□□□□□ -0.34
HERPUD1-218ENST00000569569 IQCGQ9H095 443 aaKnown RBP12.91□□□□□ -0.34
HERPUD1-218ENST00000569569 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.91□□□□□ -0.342e-8■■■□□ 18.7
HERPUD1-218ENST00000569569 GSTO2Q9H4Y5 243 aa12.91□□□□□ -0.34
HERPUD1-218ENST00000569569 CDCP1Q9H5V8 836 aa12.91□□□□□ -0.34
HERPUD1-218ENST00000569569 FARSBQ9NSD9 589 aaKnown RBP12.91□□□□□ -0.34
HERPUD1-218ENST00000569569 OXSMQ9NWU1 459 aa12.91□□□□□ -0.34
HERPUD1-218ENST00000569569 MKS1Q9NXB0 559 aa12.91□□□□□ -0.34
HERPUD1-218ENST00000569569 PPIEQ9UNP9 301 aaKnown RBP12.91□□□□□ -0.34
HERPUD1-218ENST00000569569 SLC12A4Q9UP95 1085 aa12.91□□□□□ -0.34
HERPUD1-218ENST00000569569 PLLPQ9Y342 182 aa12.91□□□□□ -0.34
HERPUD1-218ENST00000569569 ATG4BQ9Y4P1 393 aa12.91□□□□□ -0.34
HERPUD1-218ENST00000569569 CLCA3PQ9Y6N3 262 aa12.91□□□□□ -0.34
HERPUD1-218ENST00000569569 CCDC151A5D8V7 595 aa12.9□□□□□ -0.34
HERPUD1-218ENST00000569569 OR5H15A6NDH6 313 aa12.9□□□□□ -0.34
HERPUD1-218ENST00000569569 H3BQF6 201 aa12.9□□□□□ -0.34
HERPUD1-218ENST00000569569 MANBAO00462 879 aa12.9□□□□□ -0.34
HERPUD1-218ENST00000569569 TMPRSS11DO60235 418 aa12.9□□□□□ -0.34
HERPUD1-218ENST00000569569 VPS4BO75351 444 aa12.9□□□□□ -0.34
HERPUD1-218ENST00000569569 ULK1O75385 1050 aa12.9□□□□□ -0.34
HERPUD1-218ENST00000569569 ESRRBO95718 433 aa12.9□□□□□ -0.34
HERPUD1-218ENST00000569569 F10P00742 488 aa12.9□□□□□ -0.34
HERPUD1-218ENST00000569569 ENO1P06733 434 aaKnown RBP12.9□□□□□ -0.34
HERPUD1-218ENST00000569569 HSD3B1P14060 373 aa12.9□□□□□ -0.34
HERPUD1-218ENST00000569569 TNNI3P19429 210 aa12.9□□□□□ -0.34
HERPUD1-218ENST00000569569 HSD3B2P26439 372 aa12.9□□□□□ -0.34
HERPUD1-218ENST00000569569 GPR143P51810 404 aa12.9□□□□□ -0.34
HERPUD1-218ENST00000569569 NAGLUP54802 743 aa12.9□□□□□ -0.34
HERPUD1-218ENST00000569569 PRR30Q53SZ7 412 aaPredicted RBP12.9□□□□□ -0.34
HERPUD1-218ENST00000569569 CFAP157Q5JU67 520 aa12.9□□□□□ -0.34
HERPUD1-218ENST00000569569 LIPMQ5VYY2 423 aa12.9□□□□□ -0.34
HERPUD1-218ENST00000569569 C18orf63Q68DL7 685 aa12.9□□□□□ -0.34
HERPUD1-218ENST00000569569 RPUSD3Q6P087 351 aaKnown RBP12.9□□□□□ -0.34
HERPUD1-218ENST00000569569 SRRM1Q8IYB3 904 aaKnown RBP12.9□□□□□ -0.34
HERPUD1-218ENST00000569569 LGI4Q8N135 537 aa12.9□□□□□ -0.34
HERPUD1-218ENST00000569569 BEST3Q8N1M1 668 aa12.9□□□□□ -0.34
HERPUD1-218ENST00000569569 KIF2BQ8N4N8 673 aa12.9□□□□□ -0.34
HERPUD1-218ENST00000569569 BANPQ8N9N5 519 aa12.9□□□□□ -0.34
HERPUD1-218ENST00000569569 APCDD1LQ8NCL9 501 aa12.9□□□□□ -0.34
HERPUD1-218ENST00000569569 SUN3Q8TAQ9 357 aa12.9□□□□□ -0.34
HERPUD1-218ENST00000569569 DAZLQ92904 295 aaKnown RBP12.9□□□□□ -0.34
HERPUD1-218ENST00000569569 VMP1Q96GC9 406 aa12.9□□□□□ -0.34
HERPUD1-218ENST00000569569 APOPT1Q96IL0 206 aa12.9□□□□□ -0.34
HERPUD1-218ENST00000569569 NPAS2Q99743 824 aa12.9□□□□□ -0.34
HERPUD1-218ENST00000569569 MRPL1Q9BYD6 325 aaKnown RBP12.9□□□□□ -0.34
HERPUD1-218ENST00000569569 C12orf65Q9H3J6 166 aaKnown RBP12.9□□□□□ -0.34
HERPUD1-218ENST00000569569 WDR41Q9HAD4 459 aa12.9□□□□□ -0.34
HERPUD1-218ENST00000569569 MID1IP1Q9NPA3 183 aa12.9□□□□□ -0.34
HERPUD1-218ENST00000569569 MAP10Q9P2G4 905 aa12.9□□□□□ -0.34
HERPUD1-218ENST00000569569 VPS4AQ9UN37 437 aa12.9□□□□□ -0.34
HERPUD1-218ENST00000569569 COPG1Q9Y678 874 aaKnown RBP12.9□□□□□ -0.34
HERPUD1-218ENST00000569569 TENM4Q6N022 2769 aa12.89□□□□□ -0.35
HERPUD1-218ENST00000569569 MYOCOSA0A1B0GUC4 107 aa12.89□□□□□ -0.35
HERPUD1-218ENST00000569569 A0A1W2PR48 441 aa12.89□□□□□ -0.35
HERPUD1-218ENST00000569569 ARHGAP10A1A4S6 786 aa12.89□□□□□ -0.35
HERPUD1-218ENST00000569569 FGF17O60258 216 aa12.89□□□□□ -0.35
HERPUD1-218ENST00000569569 GBAP04062 536 aa12.89□□□□□ -0.35
HERPUD1-218ENST00000569569 KLK1P06870 262 aa12.89□□□□□ -0.35
HERPUD1-218ENST00000569569 TPP2P29144 1249 aaPredicted RBP12.89□□□□□ -0.35
HERPUD1-218ENST00000569569 IGLV3-21P80748 117 aaPredicted RBP12.89□□□□□ -0.35
HERPUD1-218ENST00000569569 ID2Q02363 134 aa12.89□□□□□ -0.35
HERPUD1-218ENST00000569569 CSTF3Q12996 717 aaKnown RBP12.89□□□□□ -0.35
HERPUD1-218ENST00000569569 TCHHL1Q5QJ38 904 aaPredicted RBP12.89□□□□□ -0.35
HERPUD1-218ENST00000569569 CCNYL2Q5T2Q4 361 aa12.89□□□□□ -0.35
HERPUD1-218ENST00000569569 FRMD7Q6ZUT3 714 aa12.89□□□□□ -0.35
HERPUD1-218ENST00000569569 OR4N5Q8IXE1 308 aa12.89□□□□□ -0.35
HERPUD1-218ENST00000569569 GALNT11Q8NCW6 608 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms