RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 SOX14O95416 240 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 SEMG1P04279 462 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 PCGF2P35227 344 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 RXRGP48443 463 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 KEAP1Q14145 624 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 TEAD4Q15561 434 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 IQCCQ4KMZ1 466 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 SOWAHCQ53LP3 525 aaPredicted RBP8.35□□□□□ -1.07
LINC00558-201ENST00000569422 TMEM240Q5SV17 173 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 VN1R5Q7Z5H4 357 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 IGFN1Q86VF2 1251 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 TSPYL5Q86VY4 417 aaPredicted RBP8.35□□□□□ -1.07
LINC00558-201ENST00000569422 RASGRP3Q8IV61 690 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 NRSN1Q8IZ57 195 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 CLIP4Q8N3C7 705 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 AMER3Q8N944 861 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 PHF10Q8WUB8 498 aaKnown RBP8.35□□□□□ -1.07
LINC00558-201ENST00000569422 FGF13Q92913 245 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 NLNQ9BYT8 704 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 CHST8Q9H2A9 424 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 GPN2Q9H9Y4 310 aaPredicted RBP8.35□□□□□ -1.07
LINC00558-201ENST00000569422 ZNF556Q9HAH1 456 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 ACOT13Q9NPJ3 140 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 ITM2CQ9NQX7 267 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 TAAR2Q9P1P5 351 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 CORO2BQ9UQ03 480 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 KLHL20Q9Y2M5 609 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 PLXNB3Q9ULL4 1909 aa8.35□□□□□ -1.07
LINC00558-201ENST00000569422 NPIPB8E9PQR5 432 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 PLPP1O14494 284 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 MID1O15344 667 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 KLHL18O94889 574 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 PAPLNO95428 1278 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 STSP08842 583 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 PPIBP23284 216 aaKnown RBP8.34□□□□□ -1.07
LINC00558-201ENST00000569422 CTSKP43235 329 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 DSTNP60981 165 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 IL18R1Q13478 541 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 CYP2A13Q16696 494 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 FAM71E1Q6IPT2 247 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 DEF8Q6ZN54 512 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 PAGE2Q7Z2X7 111 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 CCDC103Q8IW40 242 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 GPR65Q8IYL9 337 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 CENPSQ8N2Z9 138 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 ANKRD53Q8N9V6 530 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 OR52N2Q8NGI0 321 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 OR2L2Q8NH16 312 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 APH1BQ8WW43 257 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 PPP1R16AQ96I34 528 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 FERD3LQ96RJ6 166 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 SGPP1Q9BX95 441 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 RNF167Q9H6Y7 350 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 SLAMF7Q9NQ25 335 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 MBNL1Q9NR56 388 aaKnown RBP8.34□□□□□ -1.07
LINC00558-201ENST00000569422 C1GALT1Q9NS00 363 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 DUSP12Q9UNI6 340 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 PLEKHM1Q9Y4G2 1056 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 MYO15AQ9UKN7 3530 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 CEP290O15078 2479 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 ATG2BQ96BY7 2078 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 OBSL1O75147 1896 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 SERTM1A2A2V5 107 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 ADAMDEC1O15204 470 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 TNFRSF21O75509 655 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 ERAL1O75616 437 aaKnown RBP8.34□□□□□ -1.07
LINC00558-201ENST00000569422 GADD45GO95257 159 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 CA3P07451 260 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 IGFBP1P08833 259 aaPredicted RBP8.34□□□□□ -1.07
LINC00558-201ENST00000569422 SOX9P48436 509 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 NUBP1P53384 320 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 GPR155Q7Z3F1 870 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 RBM45Q8IUH3 476 aaKnown RBP8.34□□□□□ -1.07
LINC00558-201ENST00000569422 KRT78Q8N1N4 520 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 METTL4Q8N3J2 472 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 STX19Q8N4C7 294 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 HORMAD2Q8N7B1 307 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 AQP11Q8NBQ7 271 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 XAGE5Q8WWM1 108 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 CHFRQ96EP1 664 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 ZNF300Q96RE9 604 aaPredicted RBP8.34□□□□□ -1.07
LINC00558-201ENST00000569422 IL4I1Q96RQ9 567 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 TMEM245Q9H330 911 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 DUSP21Q9H596 190 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 ZBTB20Q9HC78 741 aaPredicted RBP8.34□□□□□ -1.07
LINC00558-201ENST00000569422 FZD3Q9NPG1 666 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 POLE4Q9NR33 117 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 TRPC4Q9UBN4 977 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 SERGEFQ9UGK8 458 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 ATP6V1HQ9UI12 483 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 TRBV23OR9-2A0A075B6M9 112 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 C17orf113A0A1B0GUU1 675 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 A0A1W2PP55 124 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 TMEM247A6NEH6 219 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 OR52A4PA6NMU1 304 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 GPR37O15354 613 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 TMCC2O75069 709 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 NFATC1O95644 943 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 INHBBP09529 407 aa8.34□□□□□ -1.07
LINC00558-201ENST00000569422 C8orf89P0DMQ9 161 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms