RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 AFF3P51826 1226 aaKnown RBP6.85□□□□□ -1.31
CNOT1-216ENST00000569240 SF3B4Q15427 424 aaKnown RBP eCLIP6.85□□□□□ -1.317e-7■■■■□ 22.8
CNOT1-216ENST00000569240 LRRC26Q2I0M4 334 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 BMP8AQ7Z5Y6 402 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 C12orf40Q86WS4 652 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 ADGRG3Q86Y34 549 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 ZDHHC14Q8IZN3 488 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 PYROXD2Q8N2H3 581 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 DCLRE1CQ96SD1 692 aaKnown RBP6.85□□□□□ -1.31
CNOT1-216ENST00000569240 ZNF251Q9BRH9 671 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 SLC2A11Q9BYW1 496 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 ABCG4Q9H172 646 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 ATG5Q9H1Y0 275 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 APMAPQ9HDC9 416 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 FAM212BQ9NTI7 297 aaPredicted RBP6.85□□□□□ -1.31
CNOT1-216ENST00000569240 DNMT3LQ9UJW3 386 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 NPFFR2Q9Y5X5 522 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 ZNF536O15090 1300 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 SLC35F4A4IF30 521 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 M0QZK8 103 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 TOR1AO14656 332 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 TAAR5O14804 337 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 TXNL1O43396 289 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 GGCTO75223 188 aaKnown RBP6.84□□□□□ -1.31
CNOT1-216ENST00000569240 OR2F2O95006 317 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 PSMB1P20618 241 aaKnown RBP6.84□□□□□ -1.31
CNOT1-216ENST00000569240 ZNF132P52740 706 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 STXBP1P61764 594 aaKnown RBP6.84□□□□□ -1.31
CNOT1-216ENST00000569240 GALNT2Q10471 571 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 SEMA3BQ13214 749 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 OR2F1Q13607 317 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 ARFRP1Q13795 201 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 GINS1Q14691 196 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 SIX1Q15475 284 aaPredicted RBP6.84□□□□□ -1.31
CNOT1-216ENST00000569240 CHRNA6Q15825 494 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 TPGS1Q6ZTW0 290 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 NRARPQ7Z6K4 114 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 SNX29P2Q8IUI4 249 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 TMEM174Q8WUU8 243 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 ACOT11Q8WXI4 607 aaPredicted RBP6.84□□□□□ -1.31
CNOT1-216ENST00000569240 CENPOQ9BU64 300 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 ASF1BQ9NVP2 202 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 MROH6A6NGR9 719 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 TMEM200CA6NKL6 621 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 MBP02144 154 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 ALDOAP04075 364 aaKnown RBP6.84□□□□□ -1.31
CNOT1-216ENST00000569240 STSP08842 583 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 CELP19835 753 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 TLE2Q04725 743 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 POU4F3Q15319 338 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 LRIT3Q3SXY7 679 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 FAM162BQ5T6X4 162 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 FBXL19Q6PCT2 694 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 TCEANCQ8N8B7 351 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 TMED9Q9BVK6 235 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 PLEKHA1Q9HB21 404 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 AMBNQ9NP70 447 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 PNO1Q9NRX1 252 aaKnown RBP6.84□□□□□ -1.31
CNOT1-216ENST00000569240 DCAF13Q9NV06 445 aaKnown RBP6.84□□□□□ -1.31
CNOT1-216ENST00000569240 ASB6Q9NWX5 421 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 FBXW11Q9UKB1 542 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 CIB4A0PJX0 185 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 OR6C75A6NL08 312 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 ELOA3DA6NLF2 546 aaPredicted RBP6.84□□□□□ -1.31
CNOT1-216ENST00000569240 D6RAR5 112 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 ARPC5O15511 151 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 ECI2O75521 394 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 SLC25A14O95258 325 aaPredicted RBP6.84□□□□□ -1.31
CNOT1-216ENST00000569240 ALPLP05186 524 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 ICAM3P32942 547 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 HOXA1P49639 335 aaPredicted RBP6.84□□□□□ -1.31
CNOT1-216ENST00000569240 CLCN7P51798 805 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 EPHB3P54753 998 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 ELOA3BQ3SY89 546 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 MSS51Q4VC12 460 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 ATAT1Q5SQI0 421 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 LIPJQ5W064 366 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 H3F3CQ6NXT2 135 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 ELOA3Q8NG57 546 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 IL31RAQ8NI17 732 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 RNF128Q8TEB7 428 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 TMEM125Q96AQ2 219 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 NEURL2Q9BR09 285 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 SLC35A5Q9BS91 424 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 SEMA4CQ9C0C4 833 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 TMPRSS5Q9H3S3 457 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 PIH1D1Q9NWS0 290 aaKnown RBP6.84□□□□□ -1.31
CNOT1-216ENST00000569240 SDHAF2Q9NX18 166 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 MED31Q9Y3C7 131 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 ENPP4Q9Y6X5 453 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 TEX13DA0A0J9YY54 714 aaPredicted RBP6.84□□□□□ -1.31
CNOT1-216ENST00000569240 XYLBO75191 536 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 LRATO95237 230 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 LCKP06239 509 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 UGT8Q16880 541 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 CTXN3Q4LDR2 81 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 RNASE12Q5GAN4 147 aaKnown RBP6.84□□□□□ -1.31
CNOT1-216ENST00000569240 CPZQ66K79 652 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 NAXDQ8IW45 347 aa6.84□□□□□ -1.31
CNOT1-216ENST00000569240 SMPDL3AQ92484 453 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms