RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 PTPN13Q12923 2485 aa7.64□□□□□ -1.19
HDGFL3-205ENST00000568129 PCNX1Q96RV3 2341 aa7.64□□□□□ -1.19
HDGFL3-205ENST00000568129 ZNF407Q9C0G0 2248 aa7.64□□□□□ -1.19
HDGFL3-205ENST00000568129 A0A1W2PR48 441 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 A8MUI8 341 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 H3BQF6 201 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 TMPRSS11DO60235 418 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 PLIN3O60664 434 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 GLRA3O75311 464 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 VPS4BO75351 444 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 EEDO75530 441 aaKnown RBP7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 SLU7O95391 586 aaKnown RBP7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 GPR75O95800 540 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 MLYCDO95822 493 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 IGKV3-11P04433 115 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 EDN3P14138 238 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 GNLYP22749 145 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 TPP2P29144 1249 aaPredicted RBP7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 SSR2P43308 183 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 STT3AP46977 705 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 TDGF1P3P51864 188 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 NEK2P51955 445 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 CDH13P55290 713 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 PKNOX1P55347 436 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 TAS2R50P59544 299 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 TBL3Q12788 808 aaKnown RBP7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 CCDC153Q494R4 210 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 EMBQ6PCB8 327 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 ZYG11AQ6WRX3 759 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 RPS27LQ71UM5 84 aaKnown RBP7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 BEST3Q8N1M1 668 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 RIBC1Q8N443 379 aaPredicted RBP7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 KIF2BQ8N4N8 673 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 FAM26EQ8N5C1 309 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 FAM47BQ8NA70 645 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 OR14A16Q8NHC5 309 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 RDH11Q8TC12 318 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 GRHL3Q8TE85 626 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 ZNF721Q8TF20 911 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 CHTF18Q8WVB6 975 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 UBLCP1Q8WVY7 318 aaPredicted RBP7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 DAZLQ92904 295 aaKnown RBP7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 ATP6V1E2Q96A05 226 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 VMP1Q96GC9 406 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 SIGLEC12Q96PQ1 595 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 SLC29A3Q9BZD2 475 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 GSTO2Q9H4Y5 243 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 CDCP1Q9H5V8 836 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 SEMA4BQ9NPR2 832 aaPredicted RBP7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 AGPAT4Q9NRZ5 378 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 LYARQ9NX58 379 aaKnown RBP7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 AHSPQ9NZD4 102 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 LUZP4Q9P127 313 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 ABI3Q9P2A4 366 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 TBK1Q9UHD2 729 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 LGALS13Q9UHV8 139 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 RAB21Q9UL25 225 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 GRID1Q9ULK0 1009 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 VPS4AQ9UN37 437 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 SPACA6W5XKT8 324 aa7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 NUP214P35658 2090 aaPredicted RBP7.63□□□□□ -1.19
HDGFL3-205ENST00000568129 PHF3Q92576 2039 aaKnown RBP7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 NCKAP5O14513 1909 aa7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 ESPNB1AK53 854 aa7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 NPIPB8E9PQR5 432 aa7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 GOLGA8RI6L899 631 aa7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 SAP18O00422 153 aaKnown RBP7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 FGF17O60258 216 aa7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 LDB3O75112 727 aa7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 ZFAND5O76080 213 aa7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 MYO1DO94832 1006 aa7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 SUPT7LO94864 414 aa7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 PDYNP01213 254 aa7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 SP1P08047 785 aa7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 FAM58BPP0C7Q3 252 aa7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 CPN2P22792 545 aa7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 PPP2R1BP30154 601 aa7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 TLX1P31314 330 aaPredicted RBP7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 UQCRFS1P47985 274 aa7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 CCT5P48643 541 aa7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 HLCSP50747 726 aa7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 TRA2BP62995 288 aaKnown RBP7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 TNFRSF17Q02223 184 aa7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 GALNT1Q10472 559 aaPredicted RBP7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 CSTF3Q12996 717 aaKnown RBP7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 IFT88Q13099 833 aa7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 SLC13A2Q13183 592 aa7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 SPRED3Q2MJR0 410 aa7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 ZNF766Q5HY98 468 aa7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 ZNF468Q5VIY5 522 aaPredicted RBP7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 C18orf63Q68DL7 685 aa7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 FCRLBQ6BAA4 426 aa7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 GALNT18Q6P9A2 607 aa7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 RNF165Q6ZSG1 346 aa7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 GPALPP1Q8IXQ4 340 aa7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 ST13P4Q8IZP2 240 aaPredicted RBP7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 BCORP1Q8N888 145 aa7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 BANPQ8N9N5 519 aa7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 EPS8L3Q8TE67 593 aaKnown RBP7.62□□□□□ -1.19
HDGFL3-205ENST00000568129 NR4A3Q92570 626 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms