RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 MMP25Q9NPA2 562 aa12.96□□□□□ -0.33
HERPUD1-210ENST00000565966 TEKT2Q9UIF3 430 aa12.96□□□□□ -0.33
HERPUD1-210ENST00000565966 FBXW2Q9UKT8 454 aa12.96□□□□□ -0.33
HERPUD1-210ENST00000565966 SLC12A4Q9UP95 1085 aa12.96□□□□□ -0.33
HERPUD1-210ENST00000565966 ZGRF1Q86YA3 2104 aa12.95□□□□□ -0.34
HERPUD1-210ENST00000565966 SPENQ96T58 3664 aaKnown RBP12.95□□□□□ -0.34
HERPUD1-210ENST00000565966 A0A0A6YYD5 115 aa12.95□□□□□ -0.34
HERPUD1-210ENST00000565966 BLACEA4D250 179 aa12.95□□□□□ -0.34
HERPUD1-210ENST00000565966 SYNDIG1LA6NDD5 238 aa12.95□□□□□ -0.34
HERPUD1-210ENST00000565966 TM9SF1O15321 606 aa12.95□□□□□ -0.34
HERPUD1-210ENST00000565966 TMPRSS11DO60235 418 aa12.95□□□□□ -0.34
HERPUD1-210ENST00000565966 NPHS1O60500 1241 aa12.95□□□□□ -0.34
HERPUD1-210ENST00000565966 CTNSO60931 367 aa12.95□□□□□ -0.34
HERPUD1-210ENST00000565966 ULK1O75385 1050 aa12.95□□□□□ -0.34
HERPUD1-210ENST00000565966 WISP1O95388 367 aa12.95□□□□□ -0.34
HERPUD1-210ENST00000565966 CHN1P15882 459 aa12.95□□□□□ -0.34
HERPUD1-210ENST00000565966 HNRNPH2P55795 449 aaKnown RBP12.95□□□□□ -0.34
HERPUD1-210ENST00000565966 ZNF33BQ06732 778 aa12.95□□□□□ -0.34
HERPUD1-210ENST00000565966 CSTF3Q12996 717 aaKnown RBP12.95□□□□□ -0.34
HERPUD1-210ENST00000565966 SLC13A2Q13183 592 aa12.95□□□□□ -0.34
HERPUD1-210ENST00000565966 MRM1Q6IN84 353 aaKnown RBP12.95□□□□□ -0.34
HERPUD1-210ENST00000565966 H3F3CQ6NXT2 135 aa12.95□□□□□ -0.34
HERPUD1-210ENST00000565966 SCIMPQ6UWF3 145 aa12.95□□□□□ -0.34
HERPUD1-210ENST00000565966 ZCCHC23Q6ZST2 131 aa12.95□□□□□ -0.34
HERPUD1-210ENST00000565966 NUDT13Q86X67 352 aa12.95□□□□□ -0.34
HERPUD1-210ENST00000565966 METTL4Q8N3J2 472 aa12.95□□□□□ -0.34
HERPUD1-210ENST00000565966 OR6Y1Q8NGX8 325 aa12.95□□□□□ -0.34
HERPUD1-210ENST00000565966 CPT1CQ8TCG5 803 aa12.95□□□□□ -0.34
HERPUD1-210ENST00000565966 HAS2Q92819 552 aa12.95□□□□□ -0.34
HERPUD1-210ENST00000565966 TLCD1Q96CP7 247 aa12.95□□□□□ -0.34
HERPUD1-210ENST00000565966 ILKAPQ9H0C8 392 aaPredicted RBP12.95□□□□□ -0.34
HERPUD1-210ENST00000565966 KCNK13Q9HB14 408 aa12.95□□□□□ -0.34
HERPUD1-210ENST00000565966 KCNK9Q9NPC2 374 aa12.95□□□□□ -0.34
HERPUD1-210ENST00000565966 ARGLU1Q9NWB6 273 aaPredicted RBP12.95□□□□□ -0.34
HERPUD1-210ENST00000565966 MS4A12Q9NXJ0 267 aa12.95□□□□□ -0.34
HERPUD1-210ENST00000565966 STMN3Q9NZ72 180 aa12.95□□□□□ -0.34
HERPUD1-210ENST00000565966 LUZP4Q9P127 313 aa12.95□□□□□ -0.34
HERPUD1-210ENST00000565966 CLDN16Q9Y5I7 305 aa12.95□□□□□ -0.34
HERPUD1-210ENST00000565966 SERTM1A2A2V5 107 aa12.94□□□□□ -0.34
HERPUD1-210ENST00000565966 DYTNA2CJ06 578 aa12.94□□□□□ -0.34
HERPUD1-210ENST00000565966 GOLGA6L10A6NI86 522 aa12.94□□□□□ -0.34
HERPUD1-210ENST00000565966 SAGE2PA6NJ88 616 aa12.94□□□□□ -0.34
HERPUD1-210ENST00000565966 A8MUI8 341 aa12.94□□□□□ -0.34
HERPUD1-210ENST00000565966 TGFBR3LH3BV60 316 aa12.94□□□□□ -0.34
HERPUD1-210ENST00000565966 PYCARD-AS1I3L0S3 204 aa12.94□□□□□ -0.34
HERPUD1-210ENST00000565966 GBAP04062 536 aa12.94□□□□□ -0.34
HERPUD1-210ENST00000565966 DHRS4L1P0CG22 281 aa12.94□□□□□ -0.34
HERPUD1-210ENST00000565966 CPN2P22792 545 aa12.94□□□□□ -0.34
HERPUD1-210ENST00000565966 TPP2P29144 1249 aaPredicted RBP12.94□□□□□ -0.34
HERPUD1-210ENST00000565966 SERPINB3P29508 390 aa12.94□□□□□ -0.34
HERPUD1-210ENST00000565966 SERPINB4P48594 390 aa12.94□□□□□ -0.34
HERPUD1-210ENST00000565966 ARG2P78540 354 aa12.94□□□□□ -0.34
HERPUD1-210ENST00000565966 FOXK1P85037 733 aa12.94□□□□□ -0.34
HERPUD1-210ENST00000565966 GALNT1Q10472 559 aaPredicted RBP12.94□□□□□ -0.34
HERPUD1-210ENST00000565966 TBL3Q12788 808 aaKnown RBP12.94□□□□□ -0.34
HERPUD1-210ENST00000565966 ABHD17BQ5VST6 288 aa12.94□□□□□ -0.34
HERPUD1-210ENST00000565966 B3GNTL1Q67FW5 361 aaPredicted RBP12.94□□□□□ -0.34
HERPUD1-210ENST00000565966 COMMD6Q7Z4G1 85 aa12.94□□□□□ -0.34
HERPUD1-210ENST00000565966 CUZD1Q86UP6 607 aa12.94□□□□□ -0.34
HERPUD1-210ENST00000565966 GPR180Q86V85 440 aa12.94□□□□□ -0.34
HERPUD1-210ENST00000565966 EFCAB3Q8N7B9 438 aa12.94□□□□□ -0.34
HERPUD1-210ENST00000565966 GBP7Q8N8V2 638 aaPredicted RBP12.94□□□□□ -0.34
HERPUD1-210ENST00000565966 C7orf57Q8NEG2 295 aa12.94□□□□□ -0.34
HERPUD1-210ENST00000565966 ELP5Q8TE02 316 aa12.94□□□□□ -0.34
HERPUD1-210ENST00000565966 PKNOX2Q96KN3 472 aa12.94□□□□□ -0.34
HERPUD1-210ENST00000565966 ZNF354BQ96LW1 612 aa12.94□□□□□ -0.34
HERPUD1-210ENST00000565966 ACPTQ9BZG2 426 aa12.94□□□□□ -0.34
HERPUD1-210ENST00000565966 NMRK1Q9NWW6 199 aa12.94□□□□□ -0.34
HERPUD1-210ENST00000565966 LYARQ9NX58 379 aaKnown RBP12.94□□□□□ -0.34
HERPUD1-210ENST00000565966 AHSPQ9NZD4 102 aa12.94□□□□□ -0.34
HERPUD1-210ENST00000565966 VPS29Q9UBQ0 182 aa12.94□□□□□ -0.34
HERPUD1-210ENST00000565966 PHF11Q9UIL8 331 aa12.94□□□□□ -0.34
HERPUD1-210ENST00000565966 ADAM29Q9UKF5 820 aa12.94□□□□□ -0.34
HERPUD1-210ENST00000565966 ATG4BQ9Y4P1 393 aa12.94□□□□□ -0.34
HERPUD1-210ENST00000565966 ASB4Q9Y574 426 aa12.94□□□□□ -0.34
HERPUD1-210ENST00000565966 CSAG2Q9Y5P2 127 aa12.94□□□□□ -0.34
HERPUD1-210ENST00000565966 A8MUA0 341 aa12.93□□□□□ -0.34
HERPUD1-210ENST00000565966 PROM1O43490 865 aa12.93□□□□□ -0.34
HERPUD1-210ENST00000565966 CRCPO75575 148 aa12.93□□□□□ -0.34
HERPUD1-210ENST00000565966 ZWINTO95229 277 aa12.93□□□□□ -0.34
HERPUD1-210ENST00000565966 KLK1P06870 262 aa12.93□□□□□ -0.34
HERPUD1-210ENST00000565966 CHRNGP07510 517 aa12.93□□□□□ -0.34
HERPUD1-210ENST00000565966 FAM58BPP0C7Q3 252 aa12.93□□□□□ -0.34
HERPUD1-210ENST00000565966 UROSP10746 265 aa12.93□□□□□ -0.34
HERPUD1-210ENST00000565966 TLX1P31314 330 aaPredicted RBP12.93□□□□□ -0.34
HERPUD1-210ENST00000565966 ARRB2P32121 409 aa12.93□□□□□ -0.34
HERPUD1-210ENST00000565966 TAS2R50P59544 299 aa12.93□□□□□ -0.34
HERPUD1-210ENST00000565966 MAGOHP61326 146 aaKnown RBP12.93□□□□□ -0.34
HERPUD1-210ENST00000565966 HMGCS1Q01581 520 aa12.93□□□□□ -0.34
HERPUD1-210ENST00000565966 TNFRSF17Q02223 184 aa12.93□□□□□ -0.34
HERPUD1-210ENST00000565966 KCNC4Q03721 635 aa12.93□□□□□ -0.34
HERPUD1-210ENST00000565966 STX4Q12846 297 aa12.93□□□□□ -0.34
HERPUD1-210ENST00000565966 TLR1Q15399 786 aa12.93□□□□□ -0.34
HERPUD1-210ENST00000565966 TERF2Q15554 542 aa12.93□□□□□ -0.34
HERPUD1-210ENST00000565966 INPP5JQ15735 1006 aaPredicted RBP12.93□□□□□ -0.34
HERPUD1-210ENST00000565966 IGFBP7Q16270 282 aa12.93□□□□□ -0.34
HERPUD1-210ENST00000565966 MEP1AQ16819 746 aa12.93□□□□□ -0.34
HERPUD1-210ENST00000565966 ARL13AQ5H913 290 aaPredicted RBP12.93□□□□□ -0.34
HERPUD1-210ENST00000565966 CES4AQ5XG92 561 aa12.93□□□□□ -0.34
HERPUD1-210ENST00000565966 C18orf63Q68DL7 685 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms