RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 RHOXF2Q9BQY4 288 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 TSGA10Q9BZW7 698 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 TRIM4Q9C037 500 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 XPO4Q9C0E2 1151 aaKnown RBP3.48□□□□□ -1.85
CHD9-212ENST00000564641 ST6GALNAC4Q9H4F1 302 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 TRPV4Q9HBA0 871 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 OSER1Q9NX31 292 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 B3GAT1Q9P2W7 334 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 GGA2Q9UJY4 613 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 CFAP45Q9UL16 551 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 BLOC1S6Q9UL45 172 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 PPP2R2CQ9Y2T4 447 aa3.48□□□□□ -1.85
CHD9-212ENST00000564641 HTTP42858 3142 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 LRRD1A4D1F6 860 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 LRRIQ3A6PVS8 624 aaPredicted RBP3.47□□□□□ -1.85
CHD9-212ENST00000564641 KLLNB2CW77 178 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 C19orf81C9J6K1 198 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 LIN7AO14910 233 aaPredicted RBP3.47□□□□□ -1.85
CHD9-212ENST00000564641 KIF5CO60282 957 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 CREG1O75629 220 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 SEC24AO95486 1093 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 ATP5BP06576 529 aaKnown RBP3.47□□□□□ -1.85
CHD9-212ENST00000564641 KRTAP1-4P0C5Y4 121 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 UQCRFS1P1P0C7P4 283 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 SLC2A2P11168 524 aaPredicted RBP3.47□□□□□ -1.85
CHD9-212ENST00000564641 PDHBP11177 359 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 TOP1P11387 765 aaKnown RBP3.47□□□□□ -1.85
CHD9-212ENST00000564641 CCL5P13501 91 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 FDPSP14324 419 aaKnown RBP3.47□□□□□ -1.85
CHD9-212ENST00000564641 CDH3P22223 829 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 KIF5BP33176 963 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 LIMK2P53671 638 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 VSNL1P62760 191 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 CUL3Q13618 768 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 SNAPC1Q16533 368 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 WHAMMP3Q1A5X7 153 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 ODF2Q5BJF6 829 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 IGSF11Q5DX21 431 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 NOTUMQ6P988 496 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 FIGLAQ6QHK4 219 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 BTN2A1Q7KYR7 527 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 DNAJB7Q7Z6W7 309 aaPredicted RBP3.47□□□□□ -1.85
CHD9-212ENST00000564641 LDB1Q86U70 411 aaPredicted RBP3.47□□□□□ -1.85
CHD9-212ENST00000564641 IQCHQ86VS3 1027 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 CDK20Q8IZL9 346 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 EID3Q8N140 333 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 ARHGAP24Q8N264 748 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 CERS5Q8N5B7 392 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 ZNF713Q8N859 430 aaPredicted RBP3.47□□□□□ -1.85
CHD9-212ENST00000564641 CFAP61Q8NHU2 1237 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 SETD6Q8TBK2 473 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 U2AF1L4Q8WU68 220 aaKnown RBP3.47□□□□□ -1.85
CHD9-212ENST00000564641 GATAD1Q8WUU5 269 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 C17orf50Q8WW18 174 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 PTERQ96BW5 349 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 TBC1D31Q96DN5 1066 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 SIPA1Q96FS4 1042 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 AGAP4Q96P64 663 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 RUFY1Q96T51 708 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 RAD9AQ99638 391 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 BPIFA3Q9BQP9 254 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 LZTS2Q9BRK4 669 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 IDI2Q9BXS1 227 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 MTMR12Q9C0I1 747 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 MMADHCQ9H3L0 296 aaPredicted RBP3.47□□□□□ -1.85
CHD9-212ENST00000564641 SERINC1Q9NRX5 453 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 OLAHQ9NV23 265 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 HAO2Q9NYQ3 351 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 HPCAL4Q9UM19 191 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 AGTPBP1Q9UPW5 1226 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 LIPGQ9Y5X9 500 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 BRCA2P51587 3418 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 CUL9Q8IWT3 2517 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 OTOFQ9HC10 1997 aa3.47□□□□□ -1.85
CHD9-212ENST00000564641 MYH2Q9UKX2 1941 aa3.46□□□□□ -1.85
CHD9-212ENST00000564641 OBSCNQ5VST9 7968 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 A0A1B0GUL6 1792 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 LOC105371242A0A075B767 164 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 EDDM13A0A1B0GTR0 161 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 C2orf81A6NN90 581 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 PDLIM1O00151 329 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 PFKFB2O60825 505 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 HSF2BPO75031 334 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 LUC7L3O95232 432 aaKnown RBP3.46□□□□□ -1.86
CHD9-212ENST00000564641 TGDSO95455 350 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 ANP32DO95626 131 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 TRUB2O95900 331 aaKnown RBP3.46□□□□□ -1.86
CHD9-212ENST00000564641 IGKV3-15P01624 115 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 LINGO3P0C6S8 592 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 GJA1P17302 382 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 ALDH3A1P30838 453 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 MC5RP33032 325 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 NPY4RP50391 375 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 LIMK1P53667 647 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 UBASH3AP57075 661 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 AKAP17AQ02040 695 aaKnown RBP3.46□□□□□ -1.86
CHD9-212ENST00000564641 SCN1BQ07699 218 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 TCP10Q12799 353 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 RALGDSQ12967 914 aa3.46□□□□□ -1.86
CHD9-212ENST00000564641 IFT88Q13099 833 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms