RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 INHAP05111 366 aa12.08□□□□□ -0.48
COMMD4-209ENST00000564068 HNF1BP35680 557 aa12.08□□□□□ -0.48
COMMD4-209ENST00000564068 MNDAP41218 407 aa12.08□□□□□ -0.48
COMMD4-209ENST00000564068 ZNF311Q5JNZ3 666 aa12.08□□□□□ -0.48
COMMD4-209ENST00000564068 MEX3DQ86XN8 651 aaKnown RBP12.08□□□□□ -0.48
COMMD4-209ENST00000564068 DUSP21Q9H596 190 aa12.08□□□□□ -0.48
COMMD4-209ENST00000564068 IL20RAQ9UHF4 553 aa12.08□□□□□ -0.48
COMMD4-209ENST00000564068 IKZF2Q9UKS7 526 aa12.08□□□□□ -0.48
COMMD4-209ENST00000564068 ASB1Q9Y576 335 aa12.08□□□□□ -0.48
COMMD4-209ENST00000564068 CACNA1CQ13936 2221 aa12.08□□□□□ -0.48
COMMD4-209ENST00000564068 TNRC6CQ9HCJ0 1690 aaKnown RBP12.08□□□□□ -0.48
COMMD4-209ENST00000564068 SH3D21A4FU49 640 aa12.08□□□□□ -0.48
COMMD4-209ENST00000564068 J3KTA2 159 aa12.08□□□□□ -0.48
COMMD4-209ENST00000564068 MUSKO15146 869 aa12.08□□□□□ -0.48
COMMD4-209ENST00000564068 B3GALT4O96024 378 aa12.08□□□□□ -0.48
COMMD4-209ENST00000564068 PLATP00750 562 aa12.08□□□□□ -0.48
COMMD4-209ENST00000564068 RHCEP18577 417 aa12.08□□□□□ -0.48
COMMD4-209ENST00000564068 TGM1P22735 817 aa12.08□□□□□ -0.48
COMMD4-209ENST00000564068 SSTR2P30874 369 aa12.08□□□□□ -0.48
COMMD4-209ENST00000564068 FAUP35544 74 aaKnown RBP12.08□□□□□ -0.48
COMMD4-209ENST00000564068 AP3S2P59780 193 aa12.08□□□□□ -0.48
COMMD4-209ENST00000564068 CTBSQ01459 385 aa12.08□□□□□ -0.48
COMMD4-209ENST00000564068 COL9A2Q14055 689 aaPredicted RBP12.08□□□□□ -0.48
COMMD4-209ENST00000564068 ZNF791Q3KP31 576 aaPredicted RBP12.08□□□□□ -0.48
COMMD4-209ENST00000564068 OTUD1Q5VV17 481 aaPredicted RBP12.08□□□□□ -0.48
COMMD4-209ENST00000564068 CST9Q5W186 159 aa12.08□□□□□ -0.48
COMMD4-209ENST00000564068 METTL3Q86U44 580 aaKnown RBP12.08□□□□□ -0.48
COMMD4-209ENST00000564068 COMMD7Q86VX2 200 aa12.08□□□□□ -0.48
COMMD4-209ENST00000564068 KIF18BQ86Y91 864 aa12.08□□□□□ -0.48
COMMD4-209ENST00000564068 KLBQ86Z14 1044 aa12.08□□□□□ -0.48
COMMD4-209ENST00000564068 CELF5Q8N6W0 485 aaKnown RBP12.08□□□□□ -0.48
COMMD4-209ENST00000564068 CPPED1Q9BRF8 314 aaPredicted RBP12.08□□□□□ -0.48
COMMD4-209ENST00000564068 EFCAB11Q9BUY7 163 aa12.08□□□□□ -0.48
COMMD4-209ENST00000564068 RIOK2Q9BVS4 552 aaKnown RBP12.08□□□□□ -0.48
COMMD4-209ENST00000564068 MARK1Q9P0L2 795 aa12.08□□□□□ -0.48
COMMD4-209ENST00000564068 NUP50Q9UKX7 468 aa12.08□□□□□ -0.48
COMMD4-209ENST00000564068 GLOD5A6NK44 160 aa12.08□□□□□ -0.48
COMMD4-209ENST00000564068 POP4O95707 220 aaKnown RBP12.08□□□□□ -0.48
COMMD4-209ENST00000564068 SPNP16150 400 aa12.08□□□□□ -0.48
COMMD4-209ENST00000564068 APEX1P27695 318 aaKnown RBP12.08□□□□□ -0.48
COMMD4-209ENST00000564068 FLYWCH1Q4VC44 716 aa12.08□□□□□ -0.48
COMMD4-209ENST00000564068 IRAK1BP1Q5VVH5 260 aa12.08□□□□□ -0.48
COMMD4-209ENST00000564068 Q6ZVL8 140 aa12.08□□□□□ -0.48
COMMD4-209ENST00000564068 CBLL1Q75N03 491 aa12.08□□□□□ -0.48
COMMD4-209ENST00000564068 SIMC1Q8NDZ2 872 aa12.08□□□□□ -0.48
COMMD4-209ENST00000564068 FOLH1BQ9HBA9 442 aa12.08□□□□□ -0.48
COMMD4-209ENST00000564068 ENPP4Q9Y6X5 453 aa12.08□□□□□ -0.48
COMMD4-209ENST00000564068 NINQ8N4C6 2090 aa12.08□□□□□ -0.48
COMMD4-209ENST00000564068 GNB5O14775 395 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 SYN3O14994 580 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 ALX3O95076 343 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 PRKACAP17612 351 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 OR3A3P47888 321 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 SNTB2Q13425 540 aaKnown RBP12.07□□□□□ -0.48
COMMD4-209ENST00000564068 LASP1Q14847 261 aaKnown RBP12.07□□□□□ -0.48
COMMD4-209ENST00000564068 FAM220AQ7Z4H9 259 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 SERPINA11Q86U17 422 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 DNAJC5GQ8N7S2 189 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 OR4C6Q8NH72 309 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 MRPL9Q9BYD2 267 aaKnown RBP12.07□□□□□ -0.48
COMMD4-209ENST00000564068 OR51I1Q9H343 314 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 P2RX2Q9UBL9 471 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 NHSQ6T4R5 1651 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 COL2A1P02458 1487 aaPredicted RBP12.07□□□□□ -0.48
COMMD4-209ENST00000564068 H3BSH0 61 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 SLC35G4P0C7Q5 338 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 NCBP2P52298 156 aaKnown RBP eCLIP12.07□□□□□ -0.482e-6■■□□□ 13
COMMD4-209ENST00000564068 PITPNAQ00169 270 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 SLAMF1Q13291 335 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 UBXN11Q5T124 520 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 FAM205BPQ63HN1 556 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 SLC27A4Q6P1M0 643 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 PLCZ1Q86YW0 608 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 FTMTQ8N4E7 242 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 FBXO22Q8NEZ5 403 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 BEST4Q8NFU0 473 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 RPLP0P6Q8NHW5 317 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 CCDC115Q96NT0 180 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 DOK1Q99704 481 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 TMEM45AQ9NWC5 275 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 CFAP20Q9Y6A4 193 aaKnown RBP12.07□□□□□ -0.48
COMMD4-209ENST00000564068 OR7A17O14581 309 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 IFNGP01579 166 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 CBSLP0DN79 551 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 JUPP14923 745 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 CBSP35520 551 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 PIK3CBP42338 1070 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 CAPZA2P47755 286 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 MASP1P48740 699 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 PIN1Q13526 163 aaPredicted RBP12.07□□□□□ -0.48
COMMD4-209ENST00000564068 DSG2Q14126 1118 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 ZDHHC20Q5W0Z9 365 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 TPRG1Q6ZUI0 275 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 RFPL4BQ6ZWI9 263 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 PGBD5Q8N414 524 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 BTBD1Q9H0C5 482 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 C11orf54Q9H0W9 315 aaPredicted RBP12.07□□□□□ -0.48
COMMD4-209ENST00000564068 OR2AG1Q9H205 316 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 IL17CQ9P0M4 197 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 MAU2Q9Y6X3 613 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms