RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 SRSF11Q05519 484 aaKnown RBP12.19□□□□□ -0.46
SPG7-209ENST00000564047 TARDBPQ13148 414 aaKnown RBP eCLIP12.19□□□□□ -0.46
SPG7-209ENST00000564047 PDE7AQ13946 482 aa12.19□□□□□ -0.46
SPG7-209ENST00000564047 RCAN2Q14206 197 aa12.19□□□□□ -0.46
SPG7-209ENST00000564047 DPY19L1Q2PZI1 675 aa12.19□□□□□ -0.46
SPG7-209ENST00000564047 DCAF12Q5T6F0 453 aa12.19□□□□□ -0.46
SPG7-209ENST00000564047 NDUFAF5Q5TEU4 345 aa12.19□□□□□ -0.46
SPG7-209ENST00000564047 BLOC1S3Q6QNY0 202 aa12.19□□□□□ -0.46
SPG7-209ENST00000564047 RIPOR1Q6ZS17 1223 aa12.19□□□□□ -0.46
SPG7-209ENST00000564047 CAMKMTQ7Z624 323 aa12.19□□□□□ -0.46
SPG7-209ENST00000564047 TREML1Q86YW5 311 aa12.19□□□□□ -0.46
SPG7-209ENST00000564047 GALNT15Q8N3T1 639 aa12.19□□□□□ -0.46
SPG7-209ENST00000564047 EFCAB3Q8N7B9 438 aa12.19□□□□□ -0.46
SPG7-209ENST00000564047 FAM13CQ8NE31 585 aa12.19□□□□□ -0.46
SPG7-209ENST00000564047 OR5T3Q8NGG3 340 aa12.19□□□□□ -0.46
SPG7-209ENST00000564047 RP9Q8TA86 221 aaKnown RBP12.19□□□□□ -0.46
SPG7-209ENST00000564047 ADAMTS18Q8TE60 1221 aa12.19□□□□□ -0.46
SPG7-209ENST00000564047 CMTM5Q96DZ9 223 aa12.19□□□□□ -0.46
SPG7-209ENST00000564047 TAAR9Q96RI9 348 aa12.19□□□□□ -0.46
SPG7-209ENST00000564047 PRPF18Q99633 342 aaKnown RBP12.19□□□□□ -0.46
SPG7-209ENST00000564047 CTRCQ99895 268 aa12.19□□□□□ -0.46
SPG7-209ENST00000564047 DDA1Q9BW61 102 aa12.19□□□□□ -0.46
SPG7-209ENST00000564047 ASPSCR1Q9BZE9 553 aa12.19□□□□□ -0.46
SPG7-209ENST00000564047 TEX10Q9NXF1 929 aaPredicted RBP12.19□□□□□ -0.46
SPG7-209ENST00000564047 EHD3Q9NZN3 535 aa12.19□□□□□ -0.46
SPG7-209ENST00000564047 NDOR1Q9UHB4 597 aa12.19□□□□□ -0.46
SPG7-209ENST00000564047 TAGLN3Q9UI15 199 aa12.19□□□□□ -0.46
SPG7-209ENST00000564047 EXO1Q9UQ84 846 aaKnown RBP12.19□□□□□ -0.46
SPG7-209ENST00000564047 PCDHGA3Q9Y5H0 932 aa12.19□□□□□ -0.46
SPG7-209ENST00000564047 PCDHA9Q9Y5H5 950 aa12.19□□□□□ -0.46
SPG7-209ENST00000564047 MDC1Q14676 2089 aaKnown RBP12.18□□□□□ -0.46
SPG7-209ENST00000564047 GABRR3A8MPY1 467 aa12.18□□□□□ -0.46
SPG7-209ENST00000564047 AKAP10O43572 662 aa12.18□□□□□ -0.46
SPG7-209ENST00000564047 CPNE3O75131 537 aaKnown RBP12.18□□□□□ -0.46
SPG7-209ENST00000564047 AIFM1O95831 613 aa12.18□□□□□ -0.46
SPG7-209ENST00000564047 ONECUT2O95948 504 aa12.18□□□□□ -0.46
SPG7-209ENST00000564047 IL6P05231 212 aa12.18□□□□□ -0.46
SPG7-209ENST00000564047 SNRPB2P08579 225 aaKnown RBP12.18□□□□□ -0.46
SPG7-209ENST00000564047 NR2F6P10588 404 aa12.18□□□□□ -0.46
SPG7-209ENST00000564047 RNH1P13489 461 aaKnown RBP12.18□□□□□ -0.46
SPG7-209ENST00000564047 COX7A2P14406 83 aa12.18□□□□□ -0.46
SPG7-209ENST00000564047 CPN2P22792 545 aa12.18□□□□□ -0.46
SPG7-209ENST00000564047 TLX1P31314 330 aaPredicted RBP12.18□□□□□ -0.46
SPG7-209ENST00000564047 MAPK10P53779 464 aa12.18□□□□□ -0.46
SPG7-209ENST00000564047 KCNK10P57789 538 aa12.18□□□□□ -0.46
SPG7-209ENST00000564047 MC1RQ01726 317 aa12.18□□□□□ -0.46
SPG7-209ENST00000564047 CYLC2Q14093 348 aaPredicted RBP12.18□□□□□ -0.46
SPG7-209ENST00000564047 DSG2Q14126 1118 aa12.18□□□□□ -0.46
SPG7-209ENST00000564047 UGT8Q16880 541 aa12.18□□□□□ -0.46
SPG7-209ENST00000564047 GK5Q6ZS86 529 aa12.18□□□□□ -0.46
SPG7-209ENST00000564047 DTWD1Q8N5C7 304 aa12.18□□□□□ -0.46
SPG7-209ENST00000564047 GFM2Q969S9 779 aaKnown RBP12.18□□□□□ -0.46
SPG7-209ENST00000564047 PPCDCQ96CD2 204 aa12.18□□□□□ -0.46
SPG7-209ENST00000564047 COQ8BQ96D53 544 aa12.18□□□□□ -0.46
SPG7-209ENST00000564047 CLIP3Q96DZ5 547 aa12.18□□□□□ -0.46
SPG7-209ENST00000564047 SLC45A3Q96JT2 553 aa12.18□□□□□ -0.46
SPG7-209ENST00000564047 LRFN5Q96NI6 719 aa12.18□□□□□ -0.46
SPG7-209ENST00000564047 ANKRD27Q96NW4 1050 aa12.18□□□□□ -0.46
SPG7-209ENST00000564047 GBP5Q96PP8 586 aa12.18□□□□□ -0.46
SPG7-209ENST00000564047 SLC25A23Q9BV35 468 aa12.18□□□□□ -0.46
SPG7-209ENST00000564047 B3GNT4Q9C0J1 378 aa12.18□□□□□ -0.46
SPG7-209ENST00000564047 C1orf21Q9H246 121 aa12.18□□□□□ -0.46
SPG7-209ENST00000564047 WDR41Q9HAD4 459 aa12.18□□□□□ -0.46
SPG7-209ENST00000564047 ZNF304Q9HCX3 659 aa12.18□□□□□ -0.46
SPG7-209ENST00000564047 SLC52A3Q9NQ40 469 aa12.18□□□□□ -0.46
SPG7-209ENST00000564047 MIEF1Q9NQG6 463 aa12.18□□□□□ -0.46
SPG7-209ENST00000564047 TAS2R7Q9NYW3 318 aa12.18□□□□□ -0.46
SPG7-209ENST00000564047 PISDQ9UG56 409 aa12.18□□□□□ -0.46
SPG7-209ENST00000564047 RAXQ9Y2V3 346 aa12.18□□□□□ -0.46
SPG7-209ENST00000564047 TMEM184BQ9Y519 407 aaPredicted RBP12.18□□□□□ -0.46
SPG7-209ENST00000564047 PTPRBP23467 1997 aa12.18□□□□□ -0.46
SPG7-209ENST00000564047 CFAP46Q8IYW2 2715 aa12.17□□□□□ -0.46
SPG7-209ENST00000564047 LOC100653049A0A140TA62 436 aa12.17□□□□□ -0.46
SPG7-209ENST00000564047 A0A1W2PNU3 283 aaPredicted RBP12.17□□□□□ -0.46
SPG7-209ENST00000564047 BLACEA4D250 179 aa12.17□□□□□ -0.46
SPG7-209ENST00000564047 CCDC154A6NI56 674 aa12.17□□□□□ -0.46
SPG7-209ENST00000564047 C9JVG2 144 aa12.17□□□□□ -0.46
SPG7-209ENST00000564047 NR5A2O00482 541 aa12.17□□□□□ -0.46
SPG7-209ENST00000564047 CYR61O00622 381 aa12.17□□□□□ -0.46
SPG7-209ENST00000564047 GYG2O15488 501 aa12.17□□□□□ -0.46
SPG7-209ENST00000564047 GSC2O15499 205 aa12.17□□□□□ -0.46
SPG7-209ENST00000564047 KRT34O76011 436 aa12.17□□□□□ -0.46
SPG7-209ENST00000564047 NTRK1P04629 796 aa12.17□□□□□ -0.46
SPG7-209ENST00000564047 PIM1P11309 404 aaPredicted RBP12.17□□□□□ -0.46
SPG7-209ENST00000564047 COX4I1P13073 169 aa12.17□□□□□ -0.46
SPG7-209ENST00000564047 CD1EP15812 388 aa12.17□□□□□ -0.46
SPG7-209ENST00000564047 ITGAXP20702 1163 aa12.17□□□□□ -0.46
SPG7-209ENST00000564047 FBLP22087 321 aaKnown RBP12.17□□□□□ -0.46
SPG7-209ENST00000564047 IL10P22301 178 aa12.17□□□□□ -0.46
SPG7-209ENST00000564047 S100A3P33764 101 aa12.17□□□□□ -0.46
SPG7-209ENST00000564047 RORAP35398 523 aa12.17□□□□□ -0.46
SPG7-209ENST00000564047 OR1D4P47884 311 aa12.17□□□□□ -0.46
SPG7-209ENST00000564047 DCDP81605 110 aaKnown RBP12.17□□□□□ -0.46
SPG7-209ENST00000564047 STX5Q13190 355 aa12.17□□□□□ -0.46
SPG7-209ENST00000564047 FAM174BQ3ZCQ3 159 aa12.17□□□□□ -0.46
SPG7-209ENST00000564047 DNAL1Q4LDG9 190 aa12.17□□□□□ -0.46
SPG7-209ENST00000564047 SPANXN4Q5MJ08 99 aa12.17□□□□□ -0.46
SPG7-209ENST00000564047 CPTPQ5TA50 214 aa12.17□□□□□ -0.46
SPG7-209ENST00000564047 TMEM164Q5U3C3 297 aa12.17□□□□□ -0.46
SPG7-209ENST00000564047 C1orf189Q5VU69 101 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms