RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 MAN1A2O60476 641 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 NPHS1O60500 1241 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 LDB3O75112 727 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 ULK1O75385 1050 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 UBR5O95071 2799 aaPredicted RBP7.99□□□□□ -1.13
UBR1-204ENST00000563239 AIFM1O95831 613 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 KRT6AP02538 564 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 KRT6BP04259 564 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 CHRNGP07510 517 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 ICAM2P13598 275 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 H2AFXP16104 143 aaPredicted RBP7.99□□□□□ -1.13
UBR1-204ENST00000563239 CPN2P22792 545 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 HMOX2P30519 316 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 KRT6CP48668 564 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 HMGCS1Q01581 520 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 TNFRSF17Q02223 184 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 ID2Q02363 134 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 ZNF33BQ06732 778 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 ACTN3Q08043 901 aaPredicted RBP7.99□□□□□ -1.13
UBR1-204ENST00000563239 C19orf57Q0VDD7 668 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 KLRB1Q12918 225 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 CSTF3Q12996 717 aaKnown RBP7.99□□□□□ -1.13
UBR1-204ENST00000563239 SLC13A2Q13183 592 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 CASP8Q14790 479 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 EXT1Q16394 746 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 BTBD16Q32M84 506 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 UGT3A2Q3SY77 523 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 ARL13AQ5H913 290 aaPredicted RBP7.99□□□□□ -1.13
UBR1-204ENST00000563239 CFAP157Q5JU67 520 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 AGAP7PQ5VUJ5 663 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 CLEC6AQ6EIG7 209 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 JMJD6Q6NYC1 403 aaPredicted RBP7.99□□□□□ -1.13
UBR1-204ENST00000563239 DGAT2L6Q6ZPD8 337 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 ZCCHC23Q6ZST2 131 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 TRIM46Q7Z4K8 759 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 NUDT13Q86X67 352 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 OR4N5Q8IXE1 308 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 MMP21Q8N119 569 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 KIF2BQ8N4N8 673 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 C1orf52Q8N6N3 182 aaKnown RBP7.99□□□□□ -1.13
UBR1-204ENST00000563239 SIRT6Q8N6T7 355 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 Q8NA96 180 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 APCDD1LQ8NCL9 501 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 ELP5Q8TE02 316 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 PTPMT1Q8WUK0 201 aaPredicted RBP7.99□□□□□ -1.13
UBR1-204ENST00000563239 TM4SF18Q96CE8 201 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 TLCD1Q96CP7 247 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 APIPQ96GX9 242 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 CNDP1Q96KN2 507 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 PKNOX2Q96KN3 472 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 AGAP4Q96P64 663 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 LMF1Q96S06 567 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 LPAR4Q99677 370 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 CENPKQ9BS16 269 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 IQCGQ9H095 443 aaKnown RBP7.99□□□□□ -1.13
UBR1-204ENST00000563239 CENPHQ9H3R5 247 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 TUBB1Q9H4B7 451 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 TMBIM4Q9HC24 238 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 MMP25Q9NPA2 562 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 LYARQ9NX58 379 aaKnown RBP7.99□□□□□ -1.13
UBR1-204ENST00000563239 TEX10Q9NXF1 929 aaPredicted RBP7.99□□□□□ -1.13
UBR1-204ENST00000563239 MS4A12Q9NXJ0 267 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 PTGFRNQ9P2B2 879 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 VPS29Q9UBQ0 182 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 VTI1BQ9UEU0 232 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 PHF11Q9UIL8 331 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 ZNF223Q9UK11 482 aaPredicted RBP7.99□□□□□ -1.13
UBR1-204ENST00000563239 CES1P1Q9UKY3 287 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 BOLA1Q9Y3E2 137 aa7.99□□□□□ -1.13
UBR1-204ENST00000563239 BLACEA4D250 179 aa7.98□□□□□ -1.13
UBR1-204ENST00000563239 GLOD5A6NK44 160 aa7.98□□□□□ -1.13
UBR1-204ENST00000563239 TMEM233B4DJY2 109 aa7.98□□□□□ -1.13
UBR1-204ENST00000563239 H3BQF6 201 aa7.98□□□□□ -1.13
UBR1-204ENST00000563239 SORBS2O94875 1100 aaKnown RBP7.98□□□□□ -1.13
UBR1-204ENST00000563239 FGF4P08620 206 aa7.98□□□□□ -1.13
UBR1-204ENST00000563239 UROSP10746 265 aa7.98□□□□□ -1.13
UBR1-204ENST00000563239 SERPINB4P48594 390 aa7.98□□□□□ -1.13
UBR1-204ENST00000563239 WDR4P57081 412 aaKnown RBP7.98□□□□□ -1.13
UBR1-204ENST00000563239 FOLH1Q04609 750 aa7.98□□□□□ -1.13
UBR1-204ENST00000563239 MFAP5Q13361 173 aa7.98□□□□□ -1.13
UBR1-204ENST00000563239 RCN2Q14257 317 aa7.98□□□□□ -1.13
UBR1-204ENST00000563239 TERF2Q15554 542 aa7.98□□□□□ -1.13
UBR1-204ENST00000563239 PLEKHN1Q494U1 663 aaPredicted RBP7.98□□□□□ -1.13
UBR1-204ENST00000563239 CRB2Q5IJ48 1285 aa7.98□□□□□ -1.13
UBR1-204ENST00000563239 CCNYL2Q5T2Q4 361 aa7.98□□□□□ -1.13
UBR1-204ENST00000563239 KANK2Q63ZY3 851 aa7.98□□□□□ -1.13
UBR1-204ENST00000563239 SLC6A19Q695T7 634 aa7.98□□□□□ -1.13
UBR1-204ENST00000563239 FCRLBQ6BAA4 426 aa7.98□□□□□ -1.13
UBR1-204ENST00000563239 CYP20A1Q6UW02 462 aa7.98□□□□□ -1.13
UBR1-204ENST00000563239 ISLR2Q6UXK2 745 aa7.98□□□□□ -1.13
UBR1-204ENST00000563239 LINC00696Q6ZRV3 163 aa7.98□□□□□ -1.13
UBR1-204ENST00000563239 CROCCP2Q86T23 111 aa7.98□□□□□ -1.13
UBR1-204ENST00000563239 CUZD1Q86UP6 607 aa7.98□□□□□ -1.13
UBR1-204ENST00000563239 HPS6Q86YV9 775 aa7.98□□□□□ -1.13
UBR1-204ENST00000563239 ZNF321PQ8N8H1 164 aa7.98□□□□□ -1.13
UBR1-204ENST00000563239 GBP7Q8N8V2 638 aaPredicted RBP7.98□□□□□ -1.13
UBR1-204ENST00000563239 DNAJB14Q8TBM8 379 aa7.98□□□□□ -1.13
UBR1-204ENST00000563239 TANKQ92844 425 aa7.98□□□□□ -1.13
UBR1-204ENST00000563239 ARL8AQ96BM9 186 aa7.98□□□□□ -1.13
UBR1-204ENST00000563239 TRMOQ9BU70 441 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms