RNA–Protein interactions for RNA: ENST00000563200.5

PPP4C-205, Transcript of protein phosphatase 4 catalytic subunit, human

TSL 5

Gene PPP4C, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4C-205	ENST00000563200	FBXW2	Q9UKT8	454 aa		20.27	■□□□□ 0.83
PPP4C-205	ENST00000563200	SPACA6	W5XKT8	324 aa		20.27	■□□□□ 0.83
PPP4C-205	ENST00000563200	FOXE1	O00358	373 aa	Predicted RBP	20.26	■□□□□ 0.83
PPP4C-205	ENST00000563200	ITGA10	O75578	1167 aa		20.26	■□□□□ 0.83
PPP4C-205	ENST00000563200	ZFAND5	O76080	213 aa		20.26	■□□□□ 0.83
PPP4C-205	ENST00000563200	CLDN9	O95484	217 aa		20.26	■□□□□ 0.83
PPP4C-205	ENST00000563200	IFNA16	P05015	189 aa		20.26	■□□□□ 0.83
PPP4C-205	ENST00000563200	CPN2	P22792	545 aa		20.26	■□□□□ 0.83
PPP4C-205	ENST00000563200	BSG	P35613	385 aa		20.26	■□□□□ 0.83
PPP4C-205	ENST00000563200	ZRSR2	Q15696	482 aa	Known RBP	20.26	■□□□□ 0.83
PPP4C-205	ENST00000563200	MAPKAPK3	Q16644	382 aa		20.26	■□□□□ 0.83
PPP4C-205	ENST00000563200	TRMT10C	Q7L0Y3	403 aa	Known RBP	20.26	■□□□□ 0.83
PPP4C-205	ENST00000563200	IFT20	Q8IY31	132 aa		20.26	■□□□□ 0.83
PPP4C-205	ENST00000563200	OR14A16	Q8NHC5	309 aa		20.26	■□□□□ 0.83
PPP4C-205	ENST00000563200	GPR137	Q96N19	417 aa		20.26	■□□□□ 0.83
PPP4C-205	ENST00000563200	CDK15	Q96Q40	435 aa		20.26	■□□□□ 0.83
PPP4C-205	ENST00000563200	MRPL57	Q9BQC6	102 aa	Known RBP	20.26	■□□□□ 0.83
PPP4C-205	ENST00000563200	TXLNGY	Q9BZA5	131 aa		20.26	■□□□□ 0.83
PPP4C-205	ENST00000563200	MS4A12	Q9NXJ0	267 aa		20.26	■□□□□ 0.83
PPP4C-205	ENST00000563200	PPT2	Q9UMR5	302 aa		20.26	■□□□□ 0.83
PPP4C-205	ENST00000563200	EXOC1L	A0A1B0GW35	172 aa		20.25	■□□□□ 0.83
PPP4C-205	ENST00000563200	FGF17	O60258	216 aa		20.25	■□□□□ 0.83
PPP4C-205	ENST00000563200	SNRPA	P09012	282 aa	Known RBP	20.25	■□□□□ 0.83
PPP4C-205	ENST00000563200	NEK2	P51955	445 aa		20.25	■□□□□ 0.83
PPP4C-205	ENST00000563200	RAP1GDS1	P52306	607 aa		20.25	■□□□□ 0.83
PPP4C-205	ENST00000563200	HNRNPH2	P55795	449 aa	Known RBP	20.25	■□□□□ 0.83
PPP4C-205	ENST00000563200	PER3	P56645	1201 aa		20.25	■□□□□ 0.83
PPP4C-205	ENST00000563200	ID2	Q02363	134 aa		20.25	■□□□□ 0.83
PPP4C-205	ENST00000563200	TRAF3	Q13114	568 aa		20.25	■□□□□ 0.83
PPP4C-205	ENST00000563200	RNFT1	Q5M7Z0	435 aa		20.25	■□□□□ 0.83
PPP4C-205	ENST00000563200	MRM1	Q6IN84	353 aa	Known RBP	20.25	■□□□□ 0.83
PPP4C-205	ENST00000563200	ADGRD1	Q6QNK2	874 aa		20.25	■□□□□ 0.83
PPP4C-205	ENST00000563200	TIFAB	Q6ZNK6	161 aa		20.25	■□□□□ 0.83
PPP4C-205	ENST00000563200	C16orf47	Q6ZP98	133 aa	Predicted RBP	20.25	■□□□□ 0.83
PPP4C-205	ENST00000563200	GPR180	Q86V85	440 aa		20.25	■□□□□ 0.83
PPP4C-205	ENST00000563200	FJX1	Q86VR8	437 aa		20.25	■□□□□ 0.83
PPP4C-205	ENST00000563200	ZNF321P	Q8N8H1	164 aa		20.25	■□□□□ 0.83
PPP4C-205	ENST00000563200	NSUN5	Q96P11	429 aa	Known RBP	20.25	■□□□□ 0.83
PPP4C-205	ENST00000563200	CENPK	Q9BS16	269 aa		20.25	■□□□□ 0.83
PPP4C-205	ENST00000563200	MRPL46	Q9H2W6	279 aa	Known RBP	20.25	■□□□□ 0.83
PPP4C-205	ENST00000563200	RPF2	Q9H7B2	306 aa	Known RBP	20.25	■□□□□ 0.83
PPP4C-205	ENST00000563200	DDX31	Q9H8H2	851 aa	Known RBP	20.25	■□□□□ 0.83
PPP4C-205	ENST00000563200	MYOT	Q9UBF9	498 aa		20.25	■□□□□ 0.83
PPP4C-205	ENST00000563200	YARS2	Q9Y2Z4	477 aa	Known RBP	20.25	■□□□□ 0.83
PPP4C-205	ENST00000563200	ATG4B	Q9Y4P1	393 aa		20.25	■□□□□ 0.83
PPP4C-205	ENST00000563200		A0A0A6YYD5	115 aa		20.24	■□□□□ 0.83
PPP4C-205	ENST00000563200	C17orf105	B2RV13	164 aa		20.24	■□□□□ 0.83
PPP4C-205	ENST00000563200	RIPK2	O43353	540 aa		20.24	■□□□□ 0.83
PPP4C-205	ENST00000563200	EED	O75530	441 aa	Known RBP	20.24	■□□□□ 0.83
PPP4C-205	ENST00000563200	RPS17	P08708	135 aa	Known RBP	20.24	■□□□□ 0.83
PPP4C-205	ENST00000563200	PHEX	P78562	749 aa		20.24	■□□□□ 0.83
PPP4C-205	ENST00000563200	TNFRSF17	Q02223	184 aa		20.24	■□□□□ 0.83
PPP4C-205	ENST00000563200	ALDH6A1	Q02252	535 aa	Known RBP	20.24	■□□□□ 0.83
PPP4C-205	ENST00000563200	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	20.24	■□□□□ 0.83
PPP4C-205	ENST00000563200	KRTCAP3	Q53RY4	240 aa		20.24	■□□□□ 0.83
PPP4C-205	ENST00000563200	C18orf63	Q68DL7	685 aa		20.24	■□□□□ 0.83
PPP4C-205	ENST00000563200	HSDL2	Q6YN16	418 aa		20.24	■□□□□ 0.83
PPP4C-205	ENST00000563200	CPSF7	Q8N684	471 aa	Known RBP	20.24	■□□□□ 0.83
PPP4C-205	ENST00000563200	SCYL1	Q96KG9	808 aa		20.24	■□□□□ 0.83
PPP4C-205	ENST00000563200	CCDC77	Q9BR77	488 aa		20.24	■□□□□ 0.83
PPP4C-205	ENST00000563200	PRM3	Q9NNZ6	103 aa		20.24	■□□□□ 0.83
PPP4C-205	ENST00000563200	ASB4	Q9Y574	426 aa		20.24	■□□□□ 0.83
PPP4C-205	ENST00000563200	PROM1	O43490	865 aa		20.23	■□□□□ 0.83
PPP4C-205	ENST00000563200	TMPRSS11D	O60235	418 aa		20.23	■□□□□ 0.83
PPP4C-205	ENST00000563200	ZG16	O60844	167 aa		20.23	■□□□□ 0.83
PPP4C-205	ENST00000563200	SMIM24	O75264	130 aa		20.23	■□□□□ 0.83
PPP4C-205	ENST00000563200	FAM153B	P0C7A2	387 aa		20.23	■□□□□ 0.83
PPP4C-205	ENST00000563200	CA7	P43166	264 aa		20.23	■□□□□ 0.83
PPP4C-205	ENST00000563200	STT3A	P46977	705 aa		20.23	■□□□□ 0.83
PPP4C-205	ENST00000563200	CCNG1	P51959	295 aa		20.23	■□□□□ 0.83
PPP4C-205	ENST00000563200	FAM153C	Q494X1	144 aa		20.23	■□□□□ 0.83
PPP4C-205	ENST00000563200	MDGA2	Q7Z553	956 aa		20.23	■□□□□ 0.83
PPP4C-205	ENST00000563200	OR4N5	Q8IXE1	308 aa		20.23	■□□□□ 0.83
PPP4C-205	ENST00000563200	TMEM156	Q8N614	296 aa		20.23	■□□□□ 0.83
PPP4C-205	ENST00000563200	FAM98A	Q8NCA5	519 aa	Known RBP	20.23	■□□□□ 0.83
PPP4C-205	ENST00000563200	C7orf57	Q8NEG2	295 aa		20.23	■□□□□ 0.83
PPP4C-205	ENST00000563200	OR8K3	Q8NH51	312 aa		20.23	■□□□□ 0.83
PPP4C-205	ENST00000563200	SLC2A12	Q8TD20	617 aa		20.23	■□□□□ 0.83
PPP4C-205	ENST00000563200	ZNF721	Q8TF20	911 aa		20.23	■□□□□ 0.83
PPP4C-205	ENST00000563200	TANK	Q92844	425 aa		20.23	■□□□□ 0.83
PPP4C-205	ENST00000563200	TMEM125	Q96AQ2	219 aa		20.23	■□□□□ 0.83
PPP4C-205	ENST00000563200	C1QTNF3	Q9BXJ4	246 aa		20.23	■□□□□ 0.83
PPP4C-205	ENST00000563200	OR8D2	Q9GZM6	311 aa		20.23	■□□□□ 0.83
PPP4C-205	ENST00000563200	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	20.23	■□□□□ 0.83
PPP4C-205	ENST00000563200	EPB41L4B	Q9H329	900 aa		20.23	■□□□□ 0.83
PPP4C-205	ENST00000563200	LIN28A	Q9H9Z2	209 aa	Known RBP	20.23	■□□□□ 0.83
PPP4C-205	ENST00000563200	PHF11	Q9UIL8	331 aa		20.23	■□□□□ 0.83
PPP4C-205	ENST00000563200	ZNF835	Q9Y2P0	537 aa		20.23	■□□□□ 0.83
PPP4C-205	ENST00000563200		A0A1B0GTL3	188 aa		20.22	■□□□□ 0.83
PPP4C-205	ENST00000563200	NPIPA5	E9PKD4	350 aa		20.22	■□□□□ 0.83
PPP4C-205	ENST00000563200	SLC19A2	O60779	497 aa		20.22	■□□□□ 0.83
PPP4C-205	ENST00000563200	OR2J2	O76002	312 aa		20.22	■□□□□ 0.83
PPP4C-205	ENST00000563200	RHOXF2B	P0C7M4	288 aa		20.22	■□□□□ 0.83
PPP4C-205	ENST00000563200	COL8A1	P27658	744 aa		20.22	■□□□□ 0.83
PPP4C-205	ENST00000563200	SSR4	P51571	173 aa		20.22	■□□□□ 0.83
PPP4C-205	ENST00000563200	GGTA1P	Q4G0N0	100 aa		20.22	■□□□□ 0.83
PPP4C-205	ENST00000563200	FRG2	Q64ET8	278 aa		20.22	■□□□□ 0.83
PPP4C-205	ENST00000563200	CYP4Z2P	Q8N1L4	340 aa		20.22	■□□□□ 0.83
PPP4C-205	ENST00000563200	ATP6V1E2	Q96A05	226 aa		20.22	■□□□□ 0.83
PPP4C-205	ENST00000563200	MTBP	Q96DY7	904 aa		20.22	■□□□□ 0.83

Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms